RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 K7ERS5 55 aa7.52□□□□□ -1.21
CCDC78-210ENST00000478979 RPS29P62273 56 aaKnown RBP7.51□□□□□ -1.21
CCDC78-210ENST00000478979 C20orf166-AS1Q96NR2 134 aa7.48□□□□□ -1.21
CCDC78-210ENST00000478979 RYR3Q15413 4870 aa7.47□□□□□ -1.21
CCDC78-210ENST00000478979 COX6B2Q6YFQ2 88 aa7.46□□□□□ -1.21
CCDC78-210ENST00000478979 HSPG2P98160 4391 aa7.46□□□□□ -1.22
CCDC78-210ENST00000478979 Q5VSD8 79 aa7.43□□□□□ -1.22
CCDC78-210ENST00000478979 FAT3Q8TDW7 4589 aa7.42□□□□□ -1.22
CCDC78-210ENST00000478979 KIAA1109Q2LD37 5005 aa7.42□□□□□ -1.22
CCDC78-210ENST00000478979 TNXBP22105 4242 aa7.4□□□□□ -1.22
CCDC78-210ENST00000478979 SPINT4Q6UDR6 99 aa7.39□□□□□ -1.23
CCDC78-210ENST00000478979 KRTAP17-1Q9BYP8 105 aa7.36□□□□□ -1.23
CCDC78-210ENST00000478979 TPRXLQ17RH7 258 aa7.36□□□□□ -1.23
CCDC78-210ENST00000478979 RPL37P61927 97 aaKnown RBP7.33□□□□□ -1.24
CCDC78-210ENST00000478979 A0A0D9SG42 100 aa7.3□□□□□ -1.24
CCDC78-210ENST00000478979 RYR1P21817 5038 aa7.3□□□□□ -1.24
CCDC78-210ENST00000478979 C10orf95Q9H7T3 257 aa7.29□□□□□ -1.24
CCDC78-210ENST00000478979 KRTAP10-8P60410 259 aa7.29□□□□□ -1.24
CCDC78-210ENST00000478979 KRTAP13-4Q3LI77 160 aa7.28□□□□□ -1.24
CCDC78-210ENST00000478979 LPAP08519 4548 aa7.28□□□□□ -1.24
CCDC78-210ENST00000478979 NDUFAF8A1L188 74 aa7.27□□□□□ -1.25
CCDC78-210ENST00000478979 KRTAP10-6P60371 365 aaPredicted RBP7.25□□□□□ -1.25
CCDC78-210ENST00000478979 XP32Q5T750 250 aa7.24□□□□□ -1.25
CCDC78-210ENST00000478979 EPPK1P58107 5090 aaKnown RBP7.24□□□□□ -1.25
CCDC78-210ENST00000478979 KRTAP15-1Q3LI76 137 aa7.23□□□□□ -1.25
CCDC78-210ENST00000478979 LRP2P98164 4655 aa7.21□□□□□ -1.26
CCDC78-210ENST00000478979 KRTAP3-3Q9BYR6 98 aa7.16□□□□□ -1.26
CCDC78-210ENST00000478979 KRTAP3-2Q9BYR7 98 aa7.16□□□□□ -1.26
CCDC78-210ENST00000478979 ABCA13Q86UQ4 5058 aa7.15□□□□□ -1.26
CCDC78-210ENST00000478979 MT1HL1P0DM35 61 aa7.13□□□□□ -1.27
CCDC78-210ENST00000478979 S4R3F8 94 aa7.11□□□□□ -1.27
CCDC78-210ENST00000478979 KRTAP12-2P59991 146 aa7.08□□□□□ -1.28
CCDC78-210ENST00000478979 KRTAP4-5Q9BYR2 181 aa7.05□□□□□ -1.28
CCDC78-210ENST00000478979 A0A0A0MQY5 61 aa7.02□□□□□ -1.29
CCDC78-210ENST00000478979 KRTAP12-1P59990 96 aa6.97□□□□□ -1.29
CCDC78-210ENST00000478979 MUC2Q02817 5179 aa6.84□□□□□ -1.31
CCDC78-210ENST00000478979 HERC2O95714 4834 aa6.8□□□□□ -1.32
CCDC78-210ENST00000478979 J3QL48 77 aa6.8□□□□□ -1.32
CCDC78-210ENST00000478979 M0QZ58 72 aa6.76□□□□□ -1.33
CCDC78-210ENST00000478979 KRTAP4-1Q9BYQ7 146 aa6.72□□□□□ -1.33
CCDC78-210ENST00000478979 PLAC4Q8WY50 150 aa6.7□□□□□ -1.34
CCDC78-210ENST00000478979 MUC17Q685J3 4493 aa6.7□□□□□ -1.34
CCDC78-210ENST00000478979 LUZP6Q538Z0 58 aa6.7□□□□□ -1.34
CCDC78-210ENST00000478979 SEC61BP60468 96 aaKnown RBP6.67□□□□□ -1.34
CCDC78-210ENST00000478979 R4GN34 69 aa6.65□□□□□ -1.34
CCDC78-210ENST00000478979 LORP23490 312 aaPredicted RBP6.64□□□□□ -1.35
CCDC78-210ENST00000478979 HERC1Q15751 4861 aa6.61□□□□□ -1.35
CCDC78-210ENST00000478979 PCLOQ9Y6V0 5065 aa6.52□□□□□ -1.37
CCDC78-210ENST00000478979 FAT4Q6V0I7 4981 aa6.49□□□□□ -1.37
CCDC78-210ENST00000478979 BIRC6Q9NR09 4857 aa6.45□□□□□ -1.38
CCDC78-210ENST00000478979 KRTAP19-2Q3LHN2 52 aa6.41□□□□□ -1.38
CCDC78-210ENST00000478979 RNF213Q63HN8 5207 aa6.4□□□□□ -1.38
CCDC78-210ENST00000478979 PP632Q6XCG6 107 aa6.37□□□□□ -1.39
CCDC78-210ENST00000478979 CAMK2N1Q7Z7J9 78 aa6.35□□□□□ -1.39
CCDC78-210ENST00000478979 FLGP20930 4061 aaPredicted RBP6.34□□□□□ -1.39
CCDC78-210ENST00000478979 HMCN2Q8NDA2 5059 aa6.34□□□□□ -1.4
CCDC78-210ENST00000478979 UBR4Q5T4S7 5183 aa6.28□□□□□ -1.4
CCDC78-210ENST00000478979 M0R2T5 61 aa6.21□□□□□ -1.42
CCDC78-210ENST00000478979 SPRR5A0A1B0GTR4 108 aa6.13□□□□□ -1.43
CCDC78-210ENST00000478979 LCE2CQ5TA81 110 aa6.11□□□□□ -1.43
CCDC78-210ENST00000478979 TNP1P09430 55 aa6.08□□□□□ -1.44
CCDC78-210ENST00000478979 KRTAP23-1A1A580 65 aa6.01□□□□□ -1.45
CCDC78-210ENST00000478979 MT1HP80294 61 aa5.99□□□□□ -1.45
CCDC78-210ENST00000478979 KRTAP10-10P60014 251 aa5.98□□□□□ -1.45
CCDC78-210ENST00000478979 KRTAP19-1Q8IUB9 90 aa5.95□□□□□ -1.46
CCDC78-210ENST00000478979 MT1FP04733 61 aa5.92□□□□□ -1.46
CCDC78-210ENST00000478979 PRO2289Q9P1D8 64 aa5.91□□□□□ -1.46
CCDC78-210ENST00000478979 MT2AP02795 61 aa5.88□□□□□ -1.47
CCDC78-210ENST00000478979 SPRR2GQ9BYE4 73 aa5.88□□□□□ -1.47
CCDC78-210ENST00000478979 KRTAP9-8Q9BYQ0 159 aa5.81□□□□□ -1.48
CCDC78-210ENST00000478979 INE1O15225 51 aa5.77□□□□□ -1.49
CCDC78-210ENST00000478979 LCE3AQ5TA76 89 aa5.75□□□□□ -1.49
CCDC78-210ENST00000478979 USH2AO75445 5202 aa5.73□□□□□ -1.49
CCDC78-210ENST00000478979 MT1BP07438 61 aa5.65□□□□□ -1.51
CCDC78-210ENST00000478979 KRTAP10-5P60370 271 aa5.61□□□□□ -1.51
CCDC78-210ENST00000478979 MT1XP80297 61 aa5.6□□□□□ -1.51
CCDC78-210ENST00000478979 KRTAP19-8Q3LI54 63 aa5.59□□□□□ -1.51
CCDC78-210ENST00000478979 KMT2DO14686 5537 aa5.59□□□□□ -1.52
CCDC78-210ENST00000478979 KRTAP9-3Q9BYQ3 159 aa5.55□□□□□ -1.52
CCDC78-210ENST00000478979 KRTAP8-1Q8IUC2 63 aa5.54□□□□□ -1.52
CCDC78-210ENST00000478979 KRTAP10-7P60409 375 aaPredicted RBP5.53□□□□□ -1.52
CCDC78-210ENST00000478979 KRTAP10-12P60413 245 aa5.5□□□□□ -1.53
CCDC78-210ENST00000478979 KRTAP12-3P60328 96 aa5.43□□□□□ -1.54
CCDC78-210ENST00000478979 LCE2BO14633 110 aa5.42□□□□□ -1.54
CCDC78-210ENST00000478979 FSIP2Q5CZC0 6907 aa5.39□□□□□ -1.55
CCDC78-210ENST00000478979 KRTAP4-8A0A0G2JLE6 195 aa5.29□□□□□ -1.56
CCDC78-210ENST00000478979 KRTAP4-8Q9BYQ9 185 aa5.29□□□□□ -1.56
CCDC78-210ENST00000478979 KRTAP19-5Q3LI72 72 aa5.27□□□□□ -1.57
CCDC78-210ENST00000478979 LCE2AQ5TA79 106 aaPredicted RBP5.25□□□□□ -1.57
CCDC78-210ENST00000478979 LCE3CQ5T5A8 94 aa5.12□□□□□ -1.59
CCDC78-210ENST00000478979 SSPOA2VEC9 5147 aa5.11□□□□□ -1.59
CCDC78-210ENST00000478979 KRTAP4-7Q9BYR0 210 aa5.07□□□□□ -1.6
CCDC78-210ENST00000478979 KRTAP9-6A8MVA2 160 aa5.03□□□□□ -1.6
CCDC78-210ENST00000478979 KRTAP19-7Q3SYF9 63 aa4.98□□□□□ -1.61
CCDC78-210ENST00000478979 KRTAP2-3P0C7H8 128 aa4.95□□□□□ -1.62
CCDC78-210ENST00000478979 KRTAP2-4Q9BYR9 128 aa4.95□□□□□ -1.62
CCDC78-210ENST00000478979 KRTAP2-1Q9BYU5 128 aa4.95□□□□□ -1.62
CCDC78-210ENST00000478979 MUC12Q9UKN1 5478 aa4.92□□□□□ -1.62
CCDC78-210ENST00000478979 FCGBPQ9Y6R7 5405 aaPredicted RBP4.92□□□□□ -1.62
CCDC78-210ENST00000478979 DSTQ03001 7570 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms