RNA–Protein interactions for RNA: ENST00000478696.5

GARNL3-214, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-214ENST00000478696 GNG13Q9P2W3 67 aa0.41□□□□□ -2.34
GARNL3-214ENST00000478696 C3orf79P0CE67 100 aa0.4□□□□□ -2.35
GARNL3-214ENST00000478696 ENHOQ6UWT2 76 aa0.4□□□□□ -2.35
GARNL3-214ENST00000478696 FSIP2Q5CZC0 6907 aa0.4□□□□□ -2.35
GARNL3-214ENST00000478696 FAT4Q6V0I7 4981 aa0.39□□□□□ -2.35
GARNL3-214ENST00000478696 KMT2DO14686 5537 aa0.39□□□□□ -2.35
GARNL3-214ENST00000478696 MACF1Q9UPN3 7388 aaKnown RBP0.39□□□□□ -2.35
GARNL3-214ENST00000478696 SACSQ9NZJ4 4579 aa0.39□□□□□ -2.35
GARNL3-214ENST00000478696 A0A087WWC5 75 aa0.39□□□□□ -2.35
GARNL3-214ENST00000478696 WFDC13Q8IUB5 93 aa0.39□□□□□ -2.35
GARNL3-214ENST00000478696 PKD1P98161 4303 aa0.38□□□□□ -2.35
GARNL3-214ENST00000478696 DNAH3Q8TD57 4116 aa0.38□□□□□ -2.35
GARNL3-214ENST00000478696 MRPL33O75394 65 aaKnown RBP0.38□□□□□ -2.35
GARNL3-214ENST00000478696 UBL5Q9BZL1 73 aa0.38□□□□□ -2.35
GARNL3-214ENST00000478696 Q9Y3F1 56 aa0.38□□□□□ -2.35
GARNL3-214ENST00000478696 MYCBP2O75592 4640 aa0.37□□□□□ -2.35
GARNL3-214ENST00000478696 DEFB131BA0A096LNP1 70 aa0.37□□□□□ -2.35
GARNL3-214ENST00000478696 STATHP02808 62 aa0.37□□□□□ -2.35
GARNL3-214ENST00000478696 KCNQ1DNQ9H478 68 aa0.37□□□□□ -2.35
GARNL3-214ENST00000478696 FAT2Q9NYQ8 4349 aa0.37□□□□□ -2.35
GARNL3-214ENST00000478696 HUWE1Q7Z6Z7 4374 aaKnown RBP0.37□□□□□ -2.35
GARNL3-214ENST00000478696 DNAH6Q9C0G6 4158 aa0.37□□□□□ -2.35
GARNL3-214ENST00000478696 DNAH9Q9NYC9 4486 aa0.36□□□□□ -2.35
GARNL3-214ENST00000478696 STARD9Q9P2P6 4700 aa0.36□□□□□ -2.35
GARNL3-214ENST00000478696 VPS13BQ7Z7G8 4022 aa0.36□□□□□ -2.35
GARNL3-214ENST00000478696 LRP1Q07954 4544 aaKnown RBP0.36□□□□□ -2.35
GARNL3-214ENST00000478696 LINC00158P58513 81 aa0.36□□□□□ -2.35
GARNL3-214ENST00000478696 KRTAP21-1Q3LI58 79 aa0.36□□□□□ -2.35
GARNL3-214ENST00000478696 S100ZQ8WXG8 99 aa0.36□□□□□ -2.35
GARNL3-214ENST00000478696 ALMS1Q8TCU4 4167 aa0.36□□□□□ -2.35
GARNL3-214ENST00000478696 LRP2P98164 4655 aa0.36□□□□□ -2.35
GARNL3-214ENST00000478696 NEBP20929 6669 aa0.36□□□□□ -2.35
GARNL3-214ENST00000478696 RNF213Q63HN8 5207 aa0.36□□□□□ -2.35
GARNL3-214ENST00000478696 DYNC1H1Q14204 4646 aaKnown RBP0.36□□□□□ -2.35
GARNL3-214ENST00000478696 FAT3Q8TDW7 4589 aa0.35□□□□□ -2.35
GARNL3-214ENST00000478696 PKHD1L1Q86WI1 4243 aa0.35□□□□□ -2.35
GARNL3-214ENST00000478696 DNAH10Q8IVF4 4471 aa0.35□□□□□ -2.35
GARNL3-214ENST00000478696 TFF3Q07654 80 aa0.35□□□□□ -2.35
GARNL3-214ENST00000478696 DEFB133Q30KQ1 61 aa0.35□□□□□ -2.35
GARNL3-214ENST00000478696 SYNE2Q8WXH0 6885 aaKnown RBP0.34□□□□□ -2.35
GARNL3-214ENST00000478696 SSPOA2VEC9 5147 aa0.34□□□□□ -2.35
GARNL3-214ENST00000478696 ETDCA0A1B0GVM5 59 aa0.34□□□□□ -2.36
GARNL3-214ENST00000478696 LINC01549A6NIU2 74 aa0.34□□□□□ -2.36
GARNL3-214ENST00000478696 SMR3BP02814 79 aaPredicted RBP0.34□□□□□ -2.36
GARNL3-214ENST00000478696 APOBP04114 4563 aaKnown RBP0.33□□□□□ -2.36
GARNL3-214ENST00000478696 CRIP1P50238 77 aa0.33□□□□□ -2.36
GARNL3-214ENST00000478696 DEFB114Q30KQ6 69 aa0.33□□□□□ -2.36
GARNL3-214ENST00000478696 SYNE1Q8NF91 8797 aaKnown RBP0.33□□□□□ -2.36
GARNL3-214ENST00000478696 HMCN2Q8NDA2 5059 aa0.33□□□□□ -2.36
GARNL3-214ENST00000478696 LPAP08519 4548 aa0.32□□□□□ -2.36
GARNL3-214ENST00000478696 FAT1Q14517 4588 aa0.32□□□□□ -2.36
GARNL3-214ENST00000478696 DSTQ03001 7570 aaKnown RBP0.32□□□□□ -2.36
GARNL3-214ENST00000478696 DNAH2Q9P225 4427 aa0.32□□□□□ -2.36
GARNL3-214ENST00000478696 TNXBP22105 4242 aa0.31□□□□□ -2.36
GARNL3-214ENST00000478696 VPS13DQ5THJ4 4388 aa0.31□□□□□ -2.36
GARNL3-214ENST00000478696 H0YAA0 97 aa0.31□□□□□ -2.36
GARNL3-214ENST00000478696 LRP1BQ9NZR2 4599 aa0.31□□□□□ -2.36
GARNL3-214ENST00000478696 MDN1Q9NU22 5596 aa0.31□□□□□ -2.36
GARNL3-214ENST00000478696 DEFB108AA8MXU0 73 aa0.3□□□□□ -2.36
GARNL3-214ENST00000478696 LYNX1G3V0Z9 82 aa0.3□□□□□ -2.36
GARNL3-214ENST00000478696 M0R2T5 61 aa0.3□□□□□ -2.36
GARNL3-214ENST00000478696 SFTA3P0C7M3 94 aa0.3□□□□□ -2.36
GARNL3-214ENST00000478696 MT1HL1P0DM35 61 aa0.3□□□□□ -2.36
GARNL3-214ENST00000478696 PLECQ15149 4684 aaKnown RBP0.3□□□□□ -2.36
GARNL3-214ENST00000478696 KRTAP19-6Q3LI70 58 aa0.3□□□□□ -2.36
GARNL3-214ENST00000478696 DNAH17Q9UFH2 4485 aa0.3□□□□□ -2.36
GARNL3-214ENST00000478696 PRM1P04553 51 aa0.29□□□□□ -2.36
GARNL3-214ENST00000478696 SPRR2EP22531 72 aa0.29□□□□□ -2.36
GARNL3-214ENST00000478696 SPRR2BP35325 72 aa0.29□□□□□ -2.36
GARNL3-214ENST00000478696 SPRR2AP35326 72 aa0.29□□□□□ -2.36
GARNL3-214ENST00000478696 DNAH5Q8TE73 4624 aa0.29□□□□□ -2.36
GARNL3-214ENST00000478696 DNAH11Q96DT5 4516 aa0.28□□□□□ -2.36
GARNL3-214ENST00000478696 K7EMI3 77 aa0.28□□□□□ -2.36
GARNL3-214ENST00000478696 SPRR2DP22532 72 aa0.28□□□□□ -2.36
GARNL3-214ENST00000478696 MT4P47944 62 aa0.28□□□□□ -2.36
GARNL3-214ENST00000478696 DEFB135Q30KP9 77 aa0.28□□□□□ -2.36
GARNL3-214ENST00000478696 DEFB104AQ8WTQ1 72 aa0.28□□□□□ -2.36
GARNL3-214ENST00000478696 DEFB130BP0DP73 79 aa0.27□□□□□ -2.37
GARNL3-214ENST00000478696 DEFB130AP0DP74 79 aa0.27□□□□□ -2.37
GARNL3-214ENST00000478696 MT1HP80294 61 aa0.27□□□□□ -2.37
GARNL3-214ENST00000478696 USH2AO75445 5202 aa0.27□□□□□ -2.37
GARNL3-214ENST00000478696 FLGP20930 4061 aaPredicted RBP0.26□□□□□ -2.37
GARNL3-214ENST00000478696 IAPPP10997 89 aa0.26□□□□□ -2.37
GARNL3-214ENST00000478696 SERF2P84101 59 aa0.26□□□□□ -2.37
GARNL3-214ENST00000478696 NCBP2-AS2Q69YL0 99 aa0.26□□□□□ -2.37
GARNL3-214ENST00000478696 NMES1Q9C002 83 aa0.26□□□□□ -2.37
GARNL3-214ENST00000478696 MUC12Q9UKN1 5478 aa0.25□□□□□ -2.37
GARNL3-214ENST00000478696 MUC17Q685J3 4493 aa0.25□□□□□ -2.37
GARNL3-214ENST00000478696 PHGR1C9JFL3 82 aa0.25□□□□□ -2.37
GARNL3-214ENST00000478696 H3BSH0 61 aa0.25□□□□□ -2.37
GARNL3-214ENST00000478696 FCER1GP30273 86 aa0.25□□□□□ -2.37
GARNL3-214ENST00000478696 DEFB110Q30KQ9 67 aa0.25□□□□□ -2.37
GARNL3-214ENST00000478696 H0YGG7 62 aa0.24□□□□□ -2.37
GARNL3-214ENST00000478696 DEFB136Q30KP8 78 aa0.24□□□□□ -2.37
GARNL3-214ENST00000478696 KRTAP19-2Q3LHN2 52 aa0.24□□□□□ -2.37
GARNL3-214ENST00000478696 DEFB108BQ8NET1 73 aa0.24□□□□□ -2.37
GARNL3-214ENST00000478696 SPRR2FQ96RM1 72 aa0.24□□□□□ -2.37
GARNL3-214ENST00000478696 DNAH8Q96JB1 4490 aa0.24□□□□□ -2.37
GARNL3-214ENST00000478696 DEFB4AO15263 64 aa0.23□□□□□ -2.37
GARNL3-214ENST00000478696 MINOS1Q5TGZ0 78 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms