RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.73□□□□□ -2.13
CDC42BPA-212ENST00000478573 HERC1Q15751 4861 aa1.73□□□□□ -2.13
CDC42BPA-212ENST00000478573 FAM236DA0A1B0GTK5 79 aa1.72□□□□□ -2.13
CDC42BPA-212ENST00000478573 FAM236CP0DP71 79 aa1.72□□□□□ -2.13
CDC42BPA-212ENST00000478573 LINC00158P58513 81 aa1.72□□□□□ -2.13
CDC42BPA-212ENST00000478573 RBM3P98179 157 aaKnown RBP1.72□□□□□ -2.13
CDC42BPA-212ENST00000478573 LINC00575Q6W349 94 aa1.72□□□□□ -2.13
CDC42BPA-212ENST00000478573 Q6ZQT0 140 aa1.72□□□□□ -2.13
CDC42BPA-212ENST00000478573 HMCN1Q96RW7 5635 aa1.72□□□□□ -2.13
CDC42BPA-212ENST00000478573 TRBV7-4A0A0J9YYF1 115 aa1.71□□□□□ -2.14
CDC42BPA-212ENST00000478573 H7BZZ5 65 aa1.71□□□□□ -2.14
CDC42BPA-212ENST00000478573 DSCR8Q96T75 97 aa1.71□□□□□ -2.14
CDC42BPA-212ENST00000478573 XAGE1AQ9HD64 81 aa1.71□□□□□ -2.14
CDC42BPA-212ENST00000478573 C14orf132Q9NPU4 83 aa1.71□□□□□ -2.14
CDC42BPA-212ENST00000478573 COX7BP24311 80 aa1.7□□□□□ -2.14
CDC42BPA-212ENST00000478573 Q5XG85 94 aa1.7□□□□□ -2.14
CDC42BPA-212ENST00000478573 H3BPC8 53 aa1.69□□□□□ -2.14
CDC42BPA-212ENST00000478573 M0R378 163 aa1.69□□□□□ -2.14
CDC42BPA-212ENST00000478573 NCR3O14931 201 aa1.69□□□□□ -2.14
CDC42BPA-212ENST00000478573 SPRR1AP35321 89 aa1.69□□□□□ -2.14
CDC42BPA-212ENST00000478573 ELOF1P60002 83 aaKnown RBP1.69□□□□□ -2.14
CDC42BPA-212ENST00000478573 C20orf197Q8N268 126 aa1.69□□□□□ -2.14
CDC42BPA-212ENST00000478573 HMCN2Q8NDA2 5059 aa1.68□□□□□ -2.14
CDC42BPA-212ENST00000478573 IGLV5-48A0A075B6I7 105 aa1.68□□□□□ -2.14
CDC42BPA-212ENST00000478573 IGKV3D-7A0A0C4DH55 119 aa1.68□□□□□ -2.14
CDC42BPA-212ENST00000478573 NDUFB1O75438 58 aa1.68□□□□□ -2.14
CDC42BPA-212ENST00000478573 Q8NDZ9 215 aa1.68□□□□□ -2.14
CDC42BPA-212ENST00000478573 KRTAP4-1Q9BYQ7 146 aa1.68□□□□□ -2.14
CDC42BPA-212ENST00000478573 KCNQ1DNQ9H478 68 aa1.68□□□□□ -2.14
CDC42BPA-212ENST00000478573 TRAV23DV6A0A075B6W5 121 aa1.67□□□□□ -2.14
CDC42BPA-212ENST00000478573 A0A087WVE0 104 aa1.67□□□□□ -2.14
CDC42BPA-212ENST00000478573 ETDCA0A1B0GVM5 59 aa1.67□□□□□ -2.14
CDC42BPA-212ENST00000478573 RPS29P62273 56 aaKnown RBP1.67□□□□□ -2.14
CDC42BPA-212ENST00000478573 PRLHP81277 87 aa1.67□□□□□ -2.14
CDC42BPA-212ENST00000478573 TMEM254Q8TBM7 123 aa1.67□□□□□ -2.14
CDC42BPA-212ENST00000478573 SPRR4Q96PI1 79 aa1.67□□□□□ -2.14
CDC42BPA-212ENST00000478573 CYP4F30PQ9H0H9 118 aa1.67□□□□□ -2.14
CDC42BPA-212ENST00000478573 LRP2P98164 4655 aa1.66□□□□□ -2.14
CDC42BPA-212ENST00000478573 F8WEM9 126 aa1.66□□□□□ -2.14
CDC42BPA-212ENST00000478573 NREPQ16612 68 aa1.66□□□□□ -2.14
CDC42BPA-212ENST00000478573 TPRXLQ17RH7 258 aa1.66□□□□□ -2.14
CDC42BPA-212ENST00000478573 Q1T7F1 81 aa1.66□□□□□ -2.14
CDC42BPA-212ENST00000478573 C1orf195Q5TG92 126 aa1.66□□□□□ -2.14
CDC42BPA-212ENST00000478573 SPAG11AQ6PDA7 123 aa1.66□□□□□ -2.14
CDC42BPA-212ENST00000478573 Q6ZQY7 126 aa1.66□□□□□ -2.14
CDC42BPA-212ENST00000478573 FP248Q71RG6 208 aaPredicted RBP1.66□□□□□ -2.14
CDC42BPA-212ENST00000478573 PRR15Q8IV56 129 aa1.66□□□□□ -2.14
CDC42BPA-212ENST00000478573 CYSTM1Q9H1C7 97 aa1.66□□□□□ -2.14
CDC42BPA-212ENST00000478573 HRCT1Q6UXD1 115 aa1.65□□□□□ -2.15
CDC42BPA-212ENST00000478573 Q6ZRX8 168 aa1.65□□□□□ -2.15
CDC42BPA-212ENST00000478573 Q9BRP9 147 aa1.65□□□□□ -2.15
CDC42BPA-212ENST00000478573 hDV103S1A0JD37 113 aa1.64□□□□□ -2.15
CDC42BPA-212ENST00000478573 HCG22E2RYF7 251 aa1.64□□□□□ -2.15
CDC42BPA-212ENST00000478573 SPINK1P00995 79 aa1.64□□□□□ -2.15
CDC42BPA-212ENST00000478573 SPRR1BP22528 89 aa1.64□□□□□ -2.15
CDC42BPA-212ENST00000478573 SSBP3-AS1Q7Z2R9 100 aa1.64□□□□□ -2.15
CDC42BPA-212ENST00000478573 LIMD2Q9BT23 127 aa1.64□□□□□ -2.15
CDC42BPA-212ENST00000478573 MUC17Q685J3 4493 aa1.63□□□□□ -2.15
CDC42BPA-212ENST00000478573 FCGBPQ9Y6R7 5405 aaPredicted RBP1.62□□□□□ -2.15
CDC42BPA-212ENST00000478573 LPAP08519 4548 aa1.62□□□□□ -2.15
CDC42BPA-212ENST00000478573 LOC101927531A0A1B0GV80 90 aa1.61□□□□□ -2.15
CDC42BPA-212ENST00000478573 PMAIP1Q13794 54 aa1.61□□□□□ -2.15
CDC42BPA-212ENST00000478573 ASB16-AS1Q495Z4 193 aa1.61□□□□□ -2.15
CDC42BPA-212ENST00000478573 TP53AIP1Q9HCN2 124 aa1.61□□□□□ -2.15
CDC42BPA-212ENST00000478573 PRO2289Q9P1D8 64 aa1.61□□□□□ -2.15
CDC42BPA-212ENST00000478573 SNURFQ9Y675 71 aa1.61□□□□□ -2.15
CDC42BPA-212ENST00000478573 TRAV22A0A0B4J277 110 aa1.6□□□□□ -2.15
CDC42BPA-212ENST00000478573 ATP11AUNQ6ZP68 121 aa1.6□□□□□ -2.15
CDC42BPA-212ENST00000478573 BRK1Q8WUW1 75 aa1.6□□□□□ -2.15
CDC42BPA-212ENST00000478573 RETNLBQ9BQ08 111 aa1.6□□□□□ -2.15
CDC42BPA-212ENST00000478573 PCOTHQ58A44 107 aa1.59□□□□□ -2.15
CDC42BPA-212ENST00000478573 A0A0G2JQZ4 141 aa1.58□□□□□ -2.16
CDC42BPA-212ENST00000478573 KRTAP12-1P59990 96 aa1.58□□□□□ -2.16
CDC42BPA-212ENST00000478573 KRTAP13-4Q3LI77 160 aa1.57□□□□□ -2.16
CDC42BPA-212ENST00000478573 LINC00208Q96KT6 92 aa1.57□□□□□ -2.16
CDC42BPA-212ENST00000478573 CDC42SE1Q9NRR8 79 aa1.57□□□□□ -2.16
CDC42BPA-212ENST00000478573 LINC01558Q9Y6Z2 57 aa1.57□□□□□ -2.16
CDC42BPA-212ENST00000478573 UBR4Q5T4S7 5183 aa1.57□□□□□ -2.16
CDC42BPA-212ENST00000478573 H0Y9P7 68 aa1.56□□□□□ -2.16
CDC42BPA-212ENST00000478573 K7EQZ3 153 aa1.56□□□□□ -2.16
CDC42BPA-212ENST00000478573 Q5VV11 94 aa1.56□□□□□ -2.16
CDC42BPA-212ENST00000478573 CASC2Q6XLA1 102 aa1.56□□□□□ -2.16
CDC42BPA-212ENST00000478573 KTN1-AS1Q86SY8 53 aa1.56□□□□□ -2.16
CDC42BPA-212ENST00000478573 LINC00472Q9H8W2 130 aa1.56□□□□□ -2.16
CDC42BPA-212ENST00000478573 RNF213Q63HN8 5207 aa1.56□□□□□ -2.16
CDC42BPA-212ENST00000478573 A8MUN3 132 aa1.55□□□□□ -2.16
CDC42BPA-212ENST00000478573 DEFB105AQ8NG35 78 aa1.55□□□□□ -2.16
CDC42BPA-212ENST00000478573 RPL37P61927 97 aaKnown RBP1.54□□□□□ -2.16
CDC42BPA-212ENST00000478573 FLGP20930 4061 aaPredicted RBP1.54□□□□□ -2.16
CDC42BPA-212ENST00000478573 A0A087WSZ3 146 aa1.53□□□□□ -2.16
CDC42BPA-212ENST00000478573 MMP24-AS1A0A0U1RRL7 71 aa1.53□□□□□ -2.16
CDC42BPA-212ENST00000478573 A6NN06 94 aa1.53□□□□□ -2.16
CDC42BPA-212ENST00000478573 CHKB-CPT1BH3BT56 60 aa1.53□□□□□ -2.16
CDC42BPA-212ENST00000478573 C7orf65Q6ZTY9 151 aa1.53□□□□□ -2.16
CDC42BPA-212ENST00000478573 COA5Q86WW8 74 aa1.53□□□□□ -2.16
CDC42BPA-212ENST00000478573 C9orf92A6NGG3 77 aa1.52□□□□□ -2.17
CDC42BPA-212ENST00000478573 ACYP2P14621 99 aa1.52□□□□□ -2.17
CDC42BPA-212ENST00000478573 LCA10Q71F78 164 aa1.52□□□□□ -2.17
CDC42BPA-212ENST00000478573 MRPL34Q9BQ48 92 aaKnown RBP1.52□□□□□ -2.17
CDC42BPA-212ENST00000478573 PRR15LQ9BU68 103 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms