RNA–Protein interactions for RNA: ENST00000478282.1

U2AF1-210, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 3,344 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-210ENST00000478282 C9orf92A6NGG3 77 aa7.97□□□□□ -1.13
U2AF1-210ENST00000478282 SMR3BP02814 79 aaPredicted RBP7.97□□□□□ -1.13
U2AF1-210ENST00000478282 Q5VSD8 79 aa7.89□□□□□ -1.15
U2AF1-210ENST00000478282 HERC2O95714 4834 aa7.88□□□□□ -1.15
U2AF1-210ENST00000478282 K7ERS5 55 aa7.88□□□□□ -1.15
U2AF1-210ENST00000478282 ROMO1P60602 79 aa7.87□□□□□ -1.15
U2AF1-210ENST00000478282 COX6B2Q6YFQ2 88 aa7.87□□□□□ -1.15
U2AF1-210ENST00000478282 FAT3Q8TDW7 4589 aa7.83□□□□□ -1.16
U2AF1-210ENST00000478282 A0A0A0MQY5 61 aa7.82□□□□□ -1.16
U2AF1-210ENST00000478282 FLG2Q5D862 2391 aaPredicted RBP7.81□□□□□ -1.16
U2AF1-210ENST00000478282 TNXBP22105 4242 aa7.81□□□□□ -1.16
U2AF1-210ENST00000478282 CRIPTQ9P021 101 aa7.8□□□□□ -1.16
U2AF1-210ENST00000478282 KRTAP4-5Q9BYR2 181 aa7.77□□□□□ -1.17
U2AF1-210ENST00000478282 LRP1Q07954 4544 aaKnown RBP7.75□□□□□ -1.17
U2AF1-210ENST00000478282 KRTAP10-8P60410 259 aa7.72□□□□□ -1.17
U2AF1-210ENST00000478282 ABCA13Q86UQ4 5058 aa7.71□□□□□ -1.17
U2AF1-210ENST00000478282 RPL37P61927 97 aaKnown RBP7.71□□□□□ -1.17
U2AF1-210ENST00000478282 KRTAP10-6P60371 365 aaPredicted RBP7.7□□□□□ -1.18
U2AF1-210ENST00000478282 MYCBP2O75592 4640 aa7.69□□□□□ -1.18
U2AF1-210ENST00000478282 MT1HL1P0DM35 61 aa7.67□□□□□ -1.18
U2AF1-210ENST00000478282 KRTAP13-4Q3LI77 160 aa7.67□□□□□ -1.18
U2AF1-210ENST00000478282 KRTAP3-3Q9BYR6 98 aa7.67□□□□□ -1.18
U2AF1-210ENST00000478282 P0C880 135 aa7.64□□□□□ -1.19
U2AF1-210ENST00000478282 A0A0D9SG42 100 aa7.63□□□□□ -1.19
U2AF1-210ENST00000478282 KRTAP3-2Q9BYR7 98 aa7.63□□□□□ -1.19
U2AF1-210ENST00000478282 TPRXLQ17RH7 258 aa7.59□□□□□ -1.19
U2AF1-210ENST00000478282 DMBT1Q9UGM3 2413 aaPredicted RBP7.57□□□□□ -1.2
U2AF1-210ENST00000478282 S4R3F8 94 aa7.56□□□□□ -1.2
U2AF1-210ENST00000478282 PCLOQ9Y6V0 5065 aa7.53□□□□□ -1.2
U2AF1-210ENST00000478282 SPINT4Q6UDR6 99 aa7.52□□□□□ -1.21
U2AF1-210ENST00000478282 C10orf95Q9H7T3 257 aa7.49□□□□□ -1.21
U2AF1-210ENST00000478282 KRTAP12-2P59991 146 aa7.44□□□□□ -1.22
U2AF1-210ENST00000478282 XP32Q5T750 250 aa7.44□□□□□ -1.22
U2AF1-210ENST00000478282 KRTAP15-1Q3LI76 137 aa7.39□□□□□ -1.23
U2AF1-210ENST00000478282 KRTAP12-1P59990 96 aa7.38□□□□□ -1.23
U2AF1-210ENST00000478282 J3QL48 77 aa7.35□□□□□ -1.23
U2AF1-210ENST00000478282 NDUFAF8A1L188 74 aa7.29□□□□□ -1.24
U2AF1-210ENST00000478282 M0QZ58 72 aa7.27□□□□□ -1.25
U2AF1-210ENST00000478282 HERC1Q15751 4861 aa7.26□□□□□ -1.25
U2AF1-210ENST00000478282 HMCN2Q8NDA2 5059 aa7.22□□□□□ -1.25
U2AF1-210ENST00000478282 LPAP08519 4548 aa7.2□□□□□ -1.26
U2AF1-210ENST00000478282 MUC17Q685J3 4493 aa7.14□□□□□ -1.27
U2AF1-210ENST00000478282 LRP2P98164 4655 aa7.1□□□□□ -1.27
U2AF1-210ENST00000478282 R4GN34 69 aa7.02□□□□□ -1.29
U2AF1-210ENST00000478282 PLAC4Q8WY50 150 aa6.93□□□□□ -1.3
U2AF1-210ENST00000478282 SEC61BP60468 96 aaKnown RBP6.92□□□□□ -1.3
U2AF1-210ENST00000478282 LORP23490 312 aaPredicted RBP6.88□□□□□ -1.31
U2AF1-210ENST00000478282 KRTAP4-1Q9BYQ7 146 aa6.88□□□□□ -1.31
U2AF1-210ENST00000478282 LUZP6Q538Z0 58 aa6.84□□□□□ -1.31
U2AF1-210ENST00000478282 UBR4Q5T4S7 5183 aa6.84□□□□□ -1.32
U2AF1-210ENST00000478282 RNF213Q63HN8 5207 aa6.78□□□□□ -1.32
U2AF1-210ENST00000478282 KRTAP19-2Q3LHN2 52 aa6.77□□□□□ -1.33
U2AF1-210ENST00000478282 PP632Q6XCG6 107 aa6.77□□□□□ -1.33
U2AF1-210ENST00000478282 MUC2Q02817 5179 aa6.75□□□□□ -1.33
U2AF1-210ENST00000478282 CAMK2N1Q7Z7J9 78 aa6.7□□□□□ -1.34
U2AF1-210ENST00000478282 LCE2CQ5TA81 110 aa6.64□□□□□ -1.35
U2AF1-210ENST00000478282 FLGP20930 4061 aaPredicted RBP6.62□□□□□ -1.35
U2AF1-210ENST00000478282 FAT4Q6V0I7 4981 aa6.52□□□□□ -1.37
U2AF1-210ENST00000478282 TNP1P09430 55 aa6.49□□□□□ -1.37
U2AF1-210ENST00000478282 KRTAP23-1A1A580 65 aa6.48□□□□□ -1.37
U2AF1-210ENST00000478282 MT1HP80294 61 aa6.45□□□□□ -1.38
U2AF1-210ENST00000478282 SPRR5A0A1B0GTR4 108 aa6.43□□□□□ -1.38
U2AF1-210ENST00000478282 LCE2AQ5TA79 106 aaPredicted RBP6.4□□□□□ -1.38
U2AF1-210ENST00000478282 KRTAP9-8Q9BYQ0 159 aa6.23□□□□□ -1.41
U2AF1-210ENST00000478282 SPRR2GQ9BYE4 73 aa6.19□□□□□ -1.42
U2AF1-210ENST00000478282 M0R2T5 61 aa6.18□□□□□ -1.42
U2AF1-210ENST00000478282 MT2AP02795 61 aa6.15□□□□□ -1.42
U2AF1-210ENST00000478282 KRTAP19-1Q8IUB9 90 aa6.14□□□□□ -1.43
U2AF1-210ENST00000478282 LCE3AQ5TA76 89 aa6.12□□□□□ -1.43
U2AF1-210ENST00000478282 MT1FP04733 61 aa6.11□□□□□ -1.43
U2AF1-210ENST00000478282 KRTAP9-3Q9BYQ3 159 aa6.02□□□□□ -1.45
U2AF1-210ENST00000478282 KRTAP10-10P60014 251 aa5.98□□□□□ -1.45
U2AF1-210ENST00000478282 KRTAP8-1Q8IUC2 63 aa5.97□□□□□ -1.45
U2AF1-210ENST00000478282 PRO2289Q9P1D8 64 aa5.94□□□□□ -1.46
U2AF1-210ENST00000478282 LCE2DQ5TA82 110 aaPredicted RBP5.89□□□□□ -1.47
U2AF1-210ENST00000478282 INE1O15225 51 aa5.87□□□□□ -1.47
U2AF1-210ENST00000478282 KRTAP19-8Q3LI54 63 aa5.87□□□□□ -1.47
U2AF1-210ENST00000478282 LCE2BO14633 110 aa5.85□□□□□ -1.47
U2AF1-210ENST00000478282 KRTAP10-5P60370 271 aa5.82□□□□□ -1.48
U2AF1-210ENST00000478282 KRTAP12-3P60328 96 aa5.81□□□□□ -1.48
U2AF1-210ENST00000478282 MT1XP80297 61 aa5.81□□□□□ -1.48
U2AF1-210ENST00000478282 MT1BP07438 61 aa5.78□□□□□ -1.48
U2AF1-210ENST00000478282 KRTAP10-12P60413 245 aa5.78□□□□□ -1.48
U2AF1-210ENST00000478282 USH2AO75445 5202 aa5.74□□□□□ -1.49
U2AF1-210ENST00000478282 KRTAP10-7P60409 375 aaPredicted RBP5.67□□□□□ -1.5
U2AF1-210ENST00000478282 KRTAP9-2Q9BYQ4 174 aa5.66□□□□□ -1.5
U2AF1-210ENST00000478282 SSPOA2VEC9 5147 aa5.6□□□□□ -1.51
U2AF1-210ENST00000478282 KRTAP19-6Q3LI70 58 aa5.57□□□□□ -1.52
U2AF1-210ENST00000478282 LCE3CQ5T5A8 94 aa5.49□□□□□ -1.53
U2AF1-210ENST00000478282 KRTAP19-5Q3LI72 72 aa5.48□□□□□ -1.53
U2AF1-210ENST00000478282 FSIP2Q5CZC0 6907 aa5.43□□□□□ -1.54
U2AF1-210ENST00000478282 CRCT1Q9UGL9 99 aa5.42□□□□□ -1.54
U2AF1-210ENST00000478282 FCGBPQ9Y6R7 5405 aaPredicted RBP5.36□□□□□ -1.55
U2AF1-210ENST00000478282 KRTAP9-6A8MVA2 160 aa5.32□□□□□ -1.56
U2AF1-210ENST00000478282 KRTAP9-6A0A140TA67 174 aa5.28□□□□□ -1.56
U2AF1-210ENST00000478282 KRTAP4-8A0A0G2JLE6 195 aa5.24□□□□□ -1.57
U2AF1-210ENST00000478282 KRTAP4-8Q9BYQ9 185 aa5.24□□□□□ -1.57
U2AF1-210ENST00000478282 KRTAP2-3P0C7H8 128 aa5.24□□□□□ -1.57
U2AF1-210ENST00000478282 KRTAP2-4Q9BYR9 128 aa5.24□□□□□ -1.57
U2AF1-210ENST00000478282 KRTAP2-1Q9BYU5 128 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms