RNA–Protein interactions for RNA: ENST00000478089.1

FBXO42-204, Transcript of F-box protein 42, humanhuman

TSL 1 (best)

Gene FBXO42, Length 2,920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO42-204ENST00000478089 DNAH11Q96DT5 4516 aa4.07□□□□□ -1.76
FBXO42-204ENST00000478089 KRTAP13-2Q52LG2 175 aa4.05□□□□□ -1.76
FBXO42-204ENST00000478089 TGP01266 2768 aa4.05□□□□□ -1.76
FBXO42-204ENST00000478089 KRTAP9-9Q9BYP9 154 aa4.05□□□□□ -1.76
FBXO42-204ENST00000478089 KRTAP1-4P0C5Y4 121 aa4.04□□□□□ -1.76
FBXO42-204ENST00000478089 FAT2Q9NYQ8 4349 aa4.04□□□□□ -1.76
FBXO42-204ENST00000478089 PKD1P98161 4303 aa4.03□□□□□ -1.76
FBXO42-204ENST00000478089 BIRC6Q9NR09 4857 aa4.03□□□□□ -1.77
FBXO42-204ENST00000478089 SPINK6Q6UWN8 80 aa4.02□□□□□ -1.77
FBXO42-204ENST00000478089 A0A1B0GVY2 172 aa4.01□□□□□ -1.77
FBXO42-204ENST00000478089 HYDINQ4G0P3 5121 aa4□□□□□ -1.77
FBXO42-204ENST00000478089 KRTAP9-6A0A140TA67 174 aa4□□□□□ -1.77
FBXO42-204ENST00000478089 KRTAP9-7A8MTY7 169 aa4□□□□□ -1.77
FBXO42-204ENST00000478089 RYR2Q92736 4967 aa3.99□□□□□ -1.77
FBXO42-204ENST00000478089 KRTAP13-3Q3SY46 172 aa3.98□□□□□ -1.77
FBXO42-204ENST00000478089 H1FX-AS1Q4G0G2 97 aa3.98□□□□□ -1.77
FBXO42-204ENST00000478089 XP32Q5T750 250 aa3.98□□□□□ -1.77
FBXO42-204ENST00000478089 COX6B2Q6YFQ2 88 aa3.98□□□□□ -1.77
FBXO42-204ENST00000478089 LRP1BQ9NZR2 4599 aa3.97□□□□□ -1.77
FBXO42-204ENST00000478089 SPINK1P00995 79 aa3.97□□□□□ -1.77
FBXO42-204ENST00000478089 RPS29P62273 56 aaKnown RBP3.96□□□□□ -1.78
FBXO42-204ENST00000478089 LCE4AQ5TA78 99 aa3.94□□□□□ -1.78
FBXO42-204ENST00000478089 SACSQ9NZJ4 4579 aa3.93□□□□□ -1.78
FBXO42-204ENST00000478089 KRTAP10-4P60372 401 aaPredicted RBP3.93□□□□□ -1.78
FBXO42-204ENST00000478089 VPS13BQ7Z7G8 4022 aa3.92□□□□□ -1.78
FBXO42-204ENST00000478089 RPL37P61927 97 aaKnown RBP3.92□□□□□ -1.78
FBXO42-204ENST00000478089 SMR3BP02814 79 aaPredicted RBP3.91□□□□□ -1.78
FBXO42-204ENST00000478089 KRTAP12-2P59991 146 aa3.91□□□□□ -1.78
FBXO42-204ENST00000478089 PKHD1L1Q86WI1 4243 aa3.9□□□□□ -1.78
FBXO42-204ENST00000478089 DYNC1H1Q14204 4646 aaKnown RBP3.9□□□□□ -1.79
FBXO42-204ENST00000478089 HERC2O95714 4834 aa3.89□□□□□ -1.79
FBXO42-204ENST00000478089 PKHD1P08F94 4074 aa3.86□□□□□ -1.79
FBXO42-204ENST00000478089 APOBP04114 4563 aaKnown RBP3.84□□□□□ -1.79
FBXO42-204ENST00000478089 RYR3Q15413 4870 aa3.83□□□□□ -1.8
FBXO42-204ENST00000478089 PP632Q6XCG6 107 aa3.8□□□□□ -1.8
FBXO42-204ENST00000478089 FAT1Q14517 4588 aa3.77□□□□□ -1.81
FBXO42-204ENST00000478089 C9orf92A6NGG3 77 aa3.77□□□□□ -1.81
FBXO42-204ENST00000478089 Q5VSD8 79 aa3.77□□□□□ -1.81
FBXO42-204ENST00000478089 KRTAP17-1Q9BYP8 105 aa3.76□□□□□ -1.81
FBXO42-204ENST00000478089 KMT2CQ8NEZ4 4911 aaKnown RBP3.76□□□□□ -1.81
FBXO42-204ENST00000478089 LCE1FQ5T754 118 aa3.75□□□□□ -1.81
FBXO42-204ENST00000478089 KRTAP2-2Q9BYT5 123 aa3.74□□□□□ -1.81
FBXO42-204ENST00000478089 LCE1AQ5T7P2 110 aa3.71□□□□□ -1.82
FBXO42-204ENST00000478089 KRTAP9-3Q9BYQ3 159 aa3.71□□□□□ -1.82
FBXO42-204ENST00000478089 HSPG2P98160 4391 aa3.7□□□□□ -1.82
FBXO42-204ENST00000478089 TNXBP22105 4242 aa3.7□□□□□ -1.82
FBXO42-204ENST00000478089 LOC100996750A0A140TA64 210 aa3.68□□□□□ -1.82
FBXO42-204ENST00000478089 KRTAP4-6Q9BYQ5 205 aa3.68□□□□□ -1.82
FBXO42-204ENST00000478089 MT1HL1P0DM35 61 aa3.67□□□□□ -1.82
FBXO42-204ENST00000478089 S4R3F8 94 aa3.67□□□□□ -1.82
FBXO42-204ENST00000478089 FAT3Q8TDW7 4589 aa3.66□□□□□ -1.82
FBXO42-204ENST00000478089 KRTAP19-1Q8IUB9 90 aa3.65□□□□□ -1.82
FBXO42-204ENST00000478089 RYR1P21817 5038 aa3.65□□□□□ -1.82
FBXO42-204ENST00000478089 SPRR5A0A1B0GTR4 108 aa3.65□□□□□ -1.83
FBXO42-204ENST00000478089 EPPK1P58107 5090 aaKnown RBP3.63□□□□□ -1.83
FBXO42-204ENST00000478089 LRP1Q07954 4544 aaKnown RBP3.63□□□□□ -1.83
FBXO42-204ENST00000478089 DMBT1Q9UGM3 2413 aaPredicted RBP3.59□□□□□ -1.83
FBXO42-204ENST00000478089 A0A0D9SG42 100 aa3.57□□□□□ -1.84
FBXO42-204ENST00000478089 MT3P25713 68 aa3.57□□□□□ -1.84
FBXO42-204ENST00000478089 KIAA1109Q2LD37 5005 aa3.56□□□□□ -1.84
FBXO42-204ENST00000478089 PCLOQ9Y6V0 5065 aa3.55□□□□□ -1.84
FBXO42-204ENST00000478089 KRTAP4-5Q9BYR2 181 aa3.54□□□□□ -1.84
FBXO42-204ENST00000478089 KRTAP10-6P60371 365 aaPredicted RBP3.53□□□□□ -1.84
FBXO42-204ENST00000478089 KRTAP13-4Q3LI77 160 aa3.53□□□□□ -1.84
FBXO42-204ENST00000478089 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.49□□□□□ -1.85
FBXO42-204ENST00000478089 MYCBP2O75592 4640 aa3.48□□□□□ -1.85
FBXO42-204ENST00000478089 KRTAP12-1P59990 96 aa3.47□□□□□ -1.85
FBXO42-204ENST00000478089 ABCA13Q86UQ4 5058 aa3.46□□□□□ -1.85
FBXO42-204ENST00000478089 MUC17Q685J3 4493 aa3.46□□□□□ -1.86
FBXO42-204ENST00000478089 LCE3CQ5T5A8 94 aa3.45□□□□□ -1.86
FBXO42-204ENST00000478089 KRTAP9-2Q9BYQ4 174 aa3.44□□□□□ -1.86
FBXO42-204ENST00000478089 KRTAP4-8Q9BYQ9 185 aa3.4□□□□□ -1.86
FBXO42-204ENST00000478089 LRP2P98164 4655 aa3.4□□□□□ -1.87
FBXO42-204ENST00000478089 LPAP08519 4548 aa3.38□□□□□ -1.87
FBXO42-204ENST00000478089 KRTAP4-12Q9BQ66 201 aa3.37□□□□□ -1.87
FBXO42-204ENST00000478089 KRTAP4-1Q9BYQ7 146 aa3.37□□□□□ -1.87
FBXO42-204ENST00000478089 M0QZ58 72 aa3.33□□□□□ -1.88
FBXO42-204ENST00000478089 KRTAP19-2Q3LHN2 52 aa3.33□□□□□ -1.88
FBXO42-204ENST00000478089 LCE3BQ5TA77 95 aa3.3□□□□□ -1.88
FBXO42-204ENST00000478089 HERC1Q15751 4861 aa3.29□□□□□ -1.88
FBXO42-204ENST00000478089 KRTAP10-12P60413 245 aa3.29□□□□□ -1.88
FBXO42-204ENST00000478089 HMCN2Q8NDA2 5059 aa3.28□□□□□ -1.88
FBXO42-204ENST00000478089 UBR4Q5T4S7 5183 aa3.24□□□□□ -1.89
FBXO42-204ENST00000478089 LCE1EQ5T753 118 aa3.22□□□□□ -1.89
FBXO42-204ENST00000478089 KRTAP10-10P60014 251 aa3.2□□□□□ -1.9
FBXO42-204ENST00000478089 LCE3EQ5T5B0 92 aa3.19□□□□□ -1.9
FBXO42-204ENST00000478089 KRTAP9-8Q9BYQ0 159 aa3.16□□□□□ -1.9
FBXO42-204ENST00000478089 FLGP20930 4061 aaPredicted RBP3.15□□□□□ -1.9
FBXO42-204ENST00000478089 KRTAP4-8A0A0G2JLE6 195 aa3.12□□□□□ -1.91
FBXO42-204ENST00000478089 LCE1DQ5T752 114 aa3.09□□□□□ -1.92
FBXO42-204ENST00000478089 MT1HP80294 61 aa3.07□□□□□ -1.92
FBXO42-204ENST00000478089 MUC2Q02817 5179 aa3.06□□□□□ -1.92
FBXO42-204ENST00000478089 KRTAP6-3Q3LI67 103 aa3.06□□□□□ -1.92
FBXO42-204ENST00000478089 SPRR2GQ9BYE4 73 aa3.05□□□□□ -1.92
FBXO42-204ENST00000478089 M0R2T5 61 aa3.03□□□□□ -1.92
FBXO42-204ENST00000478089 HMCN1Q96RW7 5635 aa3.02□□□□□ -1.93
FBXO42-204ENST00000478089 KRTAP10-7P60409 375 aaPredicted RBP3□□□□□ -1.93
FBXO42-204ENST00000478089 MT2AP02795 61 aa3□□□□□ -1.93
FBXO42-204ENST00000478089 MT1FP04733 61 aa2.99□□□□□ -1.93
FBXO42-204ENST00000478089 KRTAP4-7Q9BYR0 210 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 176.3 ms