RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 KLKP1Q107X0 134 aa9.78□□□□□ -0.84
COL9A3-211ENST00000477612 KRTAP19-8Q3LI54 63 aa9.78□□□□□ -0.84
COL9A3-211ENST00000477612 MT1BP07438 61 aa9.77□□□□□ -0.85
COL9A3-211ENST00000477612 J3QR89 54 aa9.76□□□□□ -0.85
COL9A3-211ENST00000477612 SYNE2Q8WXH0 6885 aaKnown RBP9.73□□□□□ -0.85
COL9A3-211ENST00000477612 Q5VV11 94 aa9.72□□□□□ -0.85
COL9A3-211ENST00000477612 OCR1Q9BZK8 76 aa9.68□□□□□ -0.86
COL9A3-211ENST00000477612 A8MUN3 132 aa9.67□□□□□ -0.86
COL9A3-211ENST00000477612 IMUPQ9GZP8 106 aa9.66□□□□□ -0.86
COL9A3-211ENST00000477612 CRIPTQ9P021 101 aa9.66□□□□□ -0.86
COL9A3-211ENST00000477612 LINC00208Q96KT6 92 aa9.65□□□□□ -0.86
COL9A3-211ENST00000477612 NDUFC1O43677 76 aa9.64□□□□□ -0.87
COL9A3-211ENST00000477612 H0YAA0 97 aa9.63□□□□□ -0.87
COL9A3-211ENST00000477612 KRTAP6-3Q3LI67 103 aa9.62□□□□□ -0.87
COL9A3-211ENST00000477612 A6NN06 94 aa9.61□□□□□ -0.87
COL9A3-211ENST00000477612 MP68P56378 58 aa9.6□□□□□ -0.87
COL9A3-211ENST00000477612 KRTAP10-5P60370 271 aa9.54□□□□□ -0.88
COL9A3-211ENST00000477612 H3BPC8 53 aa9.52□□□□□ -0.89
COL9A3-211ENST00000477612 K7ERU9 68 aa9.51□□□□□ -0.89
COL9A3-211ENST00000477612 ADM2Q7Z4H4 148 aa9.44□□□□□ -0.9
COL9A3-211ENST00000477612 SCGB1A1P11684 91 aa9.4□□□□□ -0.9
COL9A3-211ENST00000477612 MT-ATP8P03928 68 aa9.39□□□□□ -0.91
COL9A3-211ENST00000477612 DMAC1Q96GE9 116 aa9.38□□□□□ -0.91
COL9A3-211ENST00000477612 P0C880 135 aa9.25□□□□□ -0.93
COL9A3-211ENST00000477612 C20orf197Q8N268 126 aa9.24□□□□□ -0.93
COL9A3-211ENST00000477612 MUC12Q9UKN1 5478 aa9.22□□□□□ -0.93
COL9A3-211ENST00000477612 SMIM20Q8N5G0 67 aa9.22□□□□□ -0.93
COL9A3-211ENST00000477612 R4GN34 69 aa9.21□□□□□ -0.94
COL9A3-211ENST00000477612 TRAV7A0A075B6U4 112 aa9.2□□□□□ -0.94
COL9A3-211ENST00000477612 KRTAP5-9P26371 169 aa9.2□□□□□ -0.94
COL9A3-211ENST00000477612 KRTAP3-2Q9BYR7 98 aa9.2□□□□□ -0.94
COL9A3-211ENST00000477612 ACYP2P14621 99 aa9.15□□□□□ -0.94
COL9A3-211ENST00000477612 MT1XP80297 61 aa9.15□□□□□ -0.94
COL9A3-211ENST00000477612 PLAC4Q8WY50 150 aa9.15□□□□□ -0.94
COL9A3-211ENST00000477612 PRO2289Q9P1D8 64 aa9.15□□□□□ -0.94
COL9A3-211ENST00000477612 M0QZ58 72 aa9.12□□□□□ -0.95
COL9A3-211ENST00000477612 NEBP20929 6669 aa9.11□□□□□ -0.95
COL9A3-211ENST00000477612 KMT2DO14686 5537 aa9.04□□□□□ -0.96
COL9A3-211ENST00000477612 SPTSSBQ8NFR3 76 aa9.02□□□□□ -0.97
COL9A3-211ENST00000477612 SERP2Q8N6R1 65 aa8.99□□□□□ -0.97
COL9A3-211ENST00000477612 KRTAP12-2P59991 146 aa8.97□□□□□ -0.97
COL9A3-211ENST00000477612 SNURFQ9Y675 71 aa8.97□□□□□ -0.97
COL9A3-211ENST00000477612 MDN1Q9NU22 5596 aa8.95□□□□□ -0.98
COL9A3-211ENST00000477612 LINC01554Q52M75 96 aa8.94□□□□□ -0.98
COL9A3-211ENST00000477612 SPANXA2-OT1Q8N9U9 137 aa8.93□□□□□ -0.98
COL9A3-211ENST00000477612 CHKB-CPT1BH3BT56 60 aa8.91□□□□□ -0.98
COL9A3-211ENST00000477612 KRTAP20-1Q3LI63 56 aa8.84□□□□□ -0.99
COL9A3-211ENST00000477612 SPRR2FQ96RM1 72 aa8.84□□□□□ -0.99
COL9A3-211ENST00000477612 KRTAP8-1Q8IUC2 63 aa8.82□□□□□ -1
COL9A3-211ENST00000477612 COX7CP15954 63 aa8.78□□□□□ -1
COL9A3-211ENST00000477612 KRTAP4-8A0A0G2JLE6 195 aa8.74□□□□□ -1.01
COL9A3-211ENST00000477612 KRTAP4-8Q9BYQ9 185 aa8.74□□□□□ -1.01
COL9A3-211ENST00000477612 KRTAP10-12P60413 245 aa8.72□□□□□ -1.01
COL9A3-211ENST00000477612 SPRR2EP22531 72 aa8.71□□□□□ -1.02
COL9A3-211ENST00000477612 SPRR2BP35325 72 aa8.71□□□□□ -1.02
COL9A3-211ENST00000477612 SPRR2AP35326 72 aa8.71□□□□□ -1.02
COL9A3-211ENST00000477612 KRTAP10-7P60409 375 aaPredicted RBP8.71□□□□□ -1.02
COL9A3-211ENST00000477612 KRTAP2-3P0C7H8 128 aa8.66□□□□□ -1.02
COL9A3-211ENST00000477612 KRTAP2-4Q9BYR9 128 aa8.66□□□□□ -1.02
COL9A3-211ENST00000477612 KRTAP13-4Q3LI77 160 aa8.65□□□□□ -1.02
COL9A3-211ENST00000477612 LCE1AQ5T7P2 110 aa8.65□□□□□ -1.02
COL9A3-211ENST00000477612 COA5Q86WW8 74 aa8.62□□□□□ -1.03
COL9A3-211ENST00000477612 H7BZZ5 65 aa8.58□□□□□ -1.04
COL9A3-211ENST00000477612 ANAPC13Q9BS18 74 aa8.58□□□□□ -1.04
COL9A3-211ENST00000477612 CYSTM1Q9H1C7 97 aa8.58□□□□□ -1.04
COL9A3-211ENST00000477612 SEC61GP60059 68 aa8.46□□□□□ -1.06
COL9A3-211ENST00000477612 SERP1Q9Y6X1 66 aa8.45□□□□□ -1.06
COL9A3-211ENST00000477612 CAMK2N1Q7Z7J9 78 aa8.43□□□□□ -1.06
COL9A3-211ENST00000477612 CCDC179H3BU77 68 aa8.42□□□□□ -1.06
COL9A3-211ENST00000477612 SPRR2DP22532 72 aa8.42□□□□□ -1.06
COL9A3-211ENST00000477612 KRTAP2-2Q9BYT5 123 aa8.4□□□□□ -1.06
COL9A3-211ENST00000477612 KRTAP2-1Q9BYU5 128 aa8.4□□□□□ -1.06
COL9A3-211ENST00000477612 A0A1B0GU33 70 aa8.34□□□□□ -1.07
COL9A3-211ENST00000477612 SPATA8Q6RVD6 105 aa8.33□□□□□ -1.08
COL9A3-211ENST00000477612 A0A0D9SG42 100 aa8.3□□□□□ -1.08
COL9A3-211ENST00000477612 ATP5EP56381 51 aaPredicted RBP8.24□□□□□ -1.09
COL9A3-211ENST00000477612 KRTAP12-1P59990 96 aa8.22□□□□□ -1.09
COL9A3-211ENST00000477612 LCE3BQ5TA77 95 aa8.21□□□□□ -1.1
COL9A3-211ENST00000477612 SPINT4Q6UDR6 99 aa8.21□□□□□ -1.1
COL9A3-211ENST00000477612 KRTAP19-7Q3SYF9 63 aa8.2□□□□□ -1.1
COL9A3-211ENST00000477612 A0A1B0GU69 56 aa8.17□□□□□ -1.1
COL9A3-211ENST00000477612 TMEM258P61165 79 aa8.12□□□□□ -1.11
COL9A3-211ENST00000477612 SMIM26A0A096LP01 95 aa8.11□□□□□ -1.11
COL9A3-211ENST00000477612 MT1EP04732 61 aa8.1□□□□□ -1.11
COL9A3-211ENST00000477612 LCE5AQ5TCM9 118 aa8.09□□□□□ -1.11
COL9A3-211ENST00000477612 KRTAP19-3Q7Z4W3 81 aa8.04□□□□□ -1.12
COL9A3-211ENST00000477612 A8MU10 97 aa8.01□□□□□ -1.13
COL9A3-211ENST00000477612 PRR15LQ9BU68 103 aa7.95□□□□□ -1.14
COL9A3-211ENST00000477612 LINC01558Q9Y6Z2 57 aa7.95□□□□□ -1.14
COL9A3-211ENST00000477612 KRTAP19-5Q3LI72 72 aa7.94□□□□□ -1.14
COL9A3-211ENST00000477612 DSTQ03001 7570 aaKnown RBP7.92□□□□□ -1.14
COL9A3-211ENST00000477612 MT1GP13640 62 aa7.88□□□□□ -1.15
COL9A3-211ENST00000477612 C10orf95Q9H7T3 257 aa7.87□□□□□ -1.15
COL9A3-211ENST00000477612 TNP1P09430 55 aa7.83□□□□□ -1.16
COL9A3-211ENST00000477612 PP632Q6XCG6 107 aa7.78□□□□□ -1.16
COL9A3-211ENST00000477612 LCE3AQ5TA76 89 aa7.77□□□□□ -1.17
COL9A3-211ENST00000477612 MT1LQ93083 61 aa7.75□□□□□ -1.17
COL9A3-211ENST00000477612 MT1MQ8N339 61 aa7.71□□□□□ -1.18
COL9A3-211ENST00000477612 UQCR11O14957 56 aa7.7□□□□□ -1.18
COL9A3-211ENST00000477612 V9GYY9 64 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 174.9 ms