RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 RYR2Q92736 4967 aa7.16□□□□□ -1.26
DFFB-209ENST00000477548 KRTAP21-3Q3LHN1 58 aa7.15□□□□□ -1.27
DFFB-209ENST00000477548 APOBP04114 4563 aaKnown RBP7.13□□□□□ -1.27
DFFB-209ENST00000477548 SMR3BP02814 79 aaPredicted RBP7.11□□□□□ -1.27
DFFB-209ENST00000477548 RPL37P61927 97 aaKnown RBP7.11□□□□□ -1.27
DFFB-209ENST00000477548 A0A0D9SG42 100 aa7.09□□□□□ -1.27
DFFB-209ENST00000477548 RPS29P62273 56 aaKnown RBP7.08□□□□□ -1.28
DFFB-209ENST00000477548 TPRXLQ17RH7 258 aa7.07□□□□□ -1.28
DFFB-209ENST00000477548 RYR3Q15413 4870 aa7.05□□□□□ -1.28
DFFB-209ENST00000477548 C10orf95Q9H7T3 257 aa7.03□□□□□ -1.28
DFFB-209ENST00000477548 KRTAP13-4Q3LI77 160 aa7□□□□□ -1.29
DFFB-209ENST00000477548 LRP1Q07954 4544 aaKnown RBP7□□□□□ -1.29
DFFB-209ENST00000477548 DMBT1Q9UGM3 2413 aaPredicted RBP6.99□□□□□ -1.29
DFFB-209ENST00000477548 KRTAP10-6P60371 365 aaPredicted RBP6.99□□□□□ -1.29
DFFB-209ENST00000477548 A0A1B0GVY2 172 aa6.97□□□□□ -1.29
DFFB-209ENST00000477548 PKHD1L1Q86WI1 4243 aa6.96□□□□□ -1.3
DFFB-209ENST00000477548 HSPG2P98160 4391 aa6.9□□□□□ -1.3
DFFB-209ENST00000477548 KRTAP10-4P60372 401 aaPredicted RBP6.9□□□□□ -1.3
DFFB-209ENST00000477548 KRTAP3-3Q9BYR6 98 aa6.9□□□□□ -1.3
DFFB-209ENST00000477548 KRTAP3-2Q9BYR7 98 aa6.9□□□□□ -1.31
DFFB-209ENST00000477548 S4R3F8 94 aa6.88□□□□□ -1.31
DFFB-209ENST00000477548 MYCBP2O75592 4640 aa6.87□□□□□ -1.31
DFFB-209ENST00000477548 KIAA1109Q2LD37 5005 aa6.87□□□□□ -1.31
DFFB-209ENST00000477548 KRTAP12-2P59991 146 aa6.83□□□□□ -1.32
DFFB-209ENST00000477548 TNXBP22105 4242 aa6.81□□□□□ -1.32
DFFB-209ENST00000477548 EPPK1P58107 5090 aaKnown RBP6.81□□□□□ -1.32
DFFB-209ENST00000477548 KRTAP17-1Q9BYP8 105 aa6.8□□□□□ -1.32
DFFB-209ENST00000477548 RYR1P21817 5038 aa6.79□□□□□ -1.32
DFFB-209ENST00000477548 FAT3Q8TDW7 4589 aa6.77□□□□□ -1.33
DFFB-209ENST00000477548 KRTAP12-1P59990 96 aa6.73□□□□□ -1.33
DFFB-209ENST00000477548 KRTAP10-8P60410 259 aa6.73□□□□□ -1.33
DFFB-209ENST00000477548 XP32Q5T750 250 aa6.7□□□□□ -1.34
DFFB-209ENST00000477548 Q5VSD8 79 aa6.67□□□□□ -1.34
DFFB-209ENST00000477548 LPAP08519 4548 aa6.62□□□□□ -1.35
DFFB-209ENST00000477548 ABCA13Q86UQ4 5058 aa6.6□□□□□ -1.35
DFFB-209ENST00000477548 M0QZ58 72 aa6.59□□□□□ -1.36
DFFB-209ENST00000477548 CAMK2N1Q7Z7J9 78 aa6.55□□□□□ -1.36
DFFB-209ENST00000477548 LRP2P98164 4655 aa6.55□□□□□ -1.36
DFFB-209ENST00000477548 PLAC4Q8WY50 150 aa6.49□□□□□ -1.37
DFFB-209ENST00000477548 MT1HL1P0DM35 61 aa6.48□□□□□ -1.37
DFFB-209ENST00000477548 KRTAP4-5Q9BYR2 181 aa6.48□□□□□ -1.37
DFFB-209ENST00000477548 R4GN34 69 aa6.4□□□□□ -1.39
DFFB-209ENST00000477548 HERC2O95714 4834 aa6.36□□□□□ -1.39
DFFB-209ENST00000477548 MUC2Q02817 5179 aa6.27□□□□□ -1.41
DFFB-209ENST00000477548 PRO2289Q9P1D8 64 aa6.24□□□□□ -1.41
DFFB-209ENST00000477548 PP632Q6XCG6 107 aa6.21□□□□□ -1.42
DFFB-209ENST00000477548 HERC1Q15751 4861 aa6.19□□□□□ -1.42
DFFB-209ENST00000477548 LORP23490 312 aaPredicted RBP6.19□□□□□ -1.42
DFFB-209ENST00000477548 PCLOQ9Y6V0 5065 aa6.17□□□□□ -1.42
DFFB-209ENST00000477548 BIRC6Q9NR09 4857 aa6.16□□□□□ -1.42
DFFB-209ENST00000477548 MUC17Q685J3 4493 aa6.14□□□□□ -1.43
DFFB-209ENST00000477548 KRTAP4-1Q9BYQ7 146 aa6.06□□□□□ -1.44
DFFB-209ENST00000477548 FAT4Q6V0I7 4981 aa5.97□□□□□ -1.45
DFFB-209ENST00000477548 HMCN2Q8NDA2 5059 aa5.96□□□□□ -1.46
DFFB-209ENST00000477548 TNP1P09430 55 aa5.93□□□□□ -1.46
DFFB-209ENST00000477548 RNF213Q63HN8 5207 aa5.92□□□□□ -1.46
DFFB-209ENST00000477548 SPRR5A0A1B0GTR4 108 aa5.89□□□□□ -1.47
DFFB-209ENST00000477548 UBR4Q5T4S7 5183 aa5.86□□□□□ -1.47
DFFB-209ENST00000477548 KRTAP19-2Q3LHN2 52 aa5.86□□□□□ -1.47
DFFB-209ENST00000477548 KRTAP23-1A1A580 65 aa5.84□□□□□ -1.48
DFFB-209ENST00000477548 INE1O15225 51 aa5.81□□□□□ -1.48
DFFB-209ENST00000477548 FLGP20930 4061 aaPredicted RBP5.78□□□□□ -1.48
DFFB-209ENST00000477548 LCE2CQ5TA81 110 aa5.6□□□□□ -1.51
DFFB-209ENST00000477548 LCE3AQ5TA76 89 aa5.55□□□□□ -1.52
DFFB-209ENST00000477548 M0R2T5 61 aa5.44□□□□□ -1.54
DFFB-209ENST00000477548 MT1HP80294 61 aa5.44□□□□□ -1.54
DFFB-209ENST00000477548 SPRR2GQ9BYE4 73 aa5.43□□□□□ -1.54
DFFB-209ENST00000477548 KRTAP19-1Q8IUB9 90 aa5.4□□□□□ -1.54
DFFB-209ENST00000477548 KRTAP8-1Q8IUC2 63 aa5.36□□□□□ -1.55
DFFB-209ENST00000477548 MT1FP04733 61 aa5.33□□□□□ -1.56
DFFB-209ENST00000477548 MT2AP02795 61 aa5.3□□□□□ -1.56
DFFB-209ENST00000477548 KRTAP9-8Q9BYQ0 159 aa5.3□□□□□ -1.56
DFFB-209ENST00000477548 KRTAP10-10P60014 251 aa5.28□□□□□ -1.56
DFFB-209ENST00000477548 KRTAP12-3P60328 96 aa5.27□□□□□ -1.57
DFFB-209ENST00000477548 USH2AO75445 5202 aa5.24□□□□□ -1.57
DFFB-209ENST00000477548 KRTAP10-12P60413 245 aa5.19□□□□□ -1.58
DFFB-209ENST00000477548 LCE2DQ5TA82 110 aaPredicted RBP5.19□□□□□ -1.58
DFFB-209ENST00000477548 KRTAP10-5P60370 271 aa5.14□□□□□ -1.59
DFFB-209ENST00000477548 MT1XP80297 61 aa5.12□□□□□ -1.59
DFFB-209ENST00000477548 KRTAP19-8Q3LI54 63 aa5.1□□□□□ -1.59
DFFB-209ENST00000477548 MT1BP07438 61 aa5.08□□□□□ -1.6
DFFB-209ENST00000477548 KRTAP9-3Q9BYQ3 159 aa5.07□□□□□ -1.6
DFFB-209ENST00000477548 KRTAP10-7P60409 375 aaPredicted RBP5.05□□□□□ -1.6
DFFB-209ENST00000477548 KMT2DO14686 5537 aa5.01□□□□□ -1.61
DFFB-209ENST00000477548 LCE3CQ5T5A8 94 aa4.96□□□□□ -1.61
DFFB-209ENST00000477548 FSIP2Q5CZC0 6907 aa4.96□□□□□ -1.62
DFFB-209ENST00000477548 LCE2BO14633 110 aa4.96□□□□□ -1.62
DFFB-209ENST00000477548 LCE2AQ5TA79 106 aaPredicted RBP4.94□□□□□ -1.62
DFFB-209ENST00000477548 KRTAP19-5Q3LI72 72 aa4.91□□□□□ -1.62
DFFB-209ENST00000477548 KRTAP9-6A8MVA2 160 aa4.82□□□□□ -1.64
DFFB-209ENST00000477548 SSPOA2VEC9 5147 aa4.77□□□□□ -1.65
DFFB-209ENST00000477548 KRTAP2-3P0C7H8 128 aa4.76□□□□□ -1.65
DFFB-209ENST00000477548 KRTAP2-4Q9BYR9 128 aa4.76□□□□□ -1.65
DFFB-209ENST00000477548 KRTAP2-1Q9BYU5 128 aa4.76□□□□□ -1.65
DFFB-209ENST00000477548 KRTAP4-8A0A0G2JLE6 195 aa4.72□□□□□ -1.65
DFFB-209ENST00000477548 KRTAP4-8Q9BYQ9 185 aa4.72□□□□□ -1.65
DFFB-209ENST00000477548 KRTAP4-7Q9BYR0 210 aa4.66□□□□□ -1.66
DFFB-209ENST00000477548 KRTAP19-7Q3SYF9 63 aa4.55□□□□□ -1.68
DFFB-209ENST00000477548 FCGBPQ9Y6R7 5405 aaPredicted RBP4.49□□□□□ -1.69
DFFB-209ENST00000477548 KRTAP19-4Q3LI73 84 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms