RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 C20orf166-AS1Q96NR2 134 aa8.2□□□□□ -1.1
CLSTN1-205ENST00000477264 KRTAP3-1Q9BYR8 98 aa8.18□□□□□ -1.1
CLSTN1-205ENST00000477264 COX6B2Q6YFQ2 88 aa8.16□□□□□ -1.1
CLSTN1-205ENST00000477264 HSPG2P98160 4391 aa8.15□□□□□ -1.1
CLSTN1-205ENST00000477264 P0C880 135 aa8.12□□□□□ -1.11
CLSTN1-205ENST00000477264 RYR1P21817 5038 aa8.08□□□□□ -1.12
CLSTN1-205ENST00000477264 RPL37P61927 97 aaKnown RBP8.08□□□□□ -1.12
CLSTN1-205ENST00000477264 CRIPTQ9P021 101 aa8.06□□□□□ -1.12
CLSTN1-205ENST00000477264 PKHD1L1Q86WI1 4243 aa8.05□□□□□ -1.12
CLSTN1-205ENST00000477264 KIAA1109Q2LD37 5005 aa8.04□□□□□ -1.12
CLSTN1-205ENST00000477264 KRTAP17-1Q9BYP8 105 aa8.04□□□□□ -1.12
CLSTN1-205ENST00000477264 C9orf92A6NGG3 77 aa8□□□□□ -1.13
CLSTN1-205ENST00000477264 SPINT4Q6UDR6 99 aa8□□□□□ -1.13
CLSTN1-205ENST00000477264 KRTAP10-8P60410 259 aa7.95□□□□□ -1.14
CLSTN1-205ENST00000477264 TPRXLQ17RH7 258 aa7.94□□□□□ -1.14
CLSTN1-205ENST00000477264 FLG2Q5D862 2391 aaPredicted RBP7.94□□□□□ -1.14
CLSTN1-205ENST00000477264 KRTAP10-6P60371 365 aaPredicted RBP7.93□□□□□ -1.14
CLSTN1-205ENST00000477264 HERC2O95714 4834 aa7.92□□□□□ -1.14
CLSTN1-205ENST00000477264 LRP1Q07954 4544 aaKnown RBP7.91□□□□□ -1.14
CLSTN1-205ENST00000477264 KRTAP15-1Q3LI76 137 aa7.87□□□□□ -1.15
CLSTN1-205ENST00000477264 KRTAP4-5Q9BYR2 181 aa7.87□□□□□ -1.15
CLSTN1-205ENST00000477264 TNXBP22105 4242 aa7.87□□□□□ -1.15
CLSTN1-205ENST00000477264 KRTAP13-4Q3LI77 160 aa7.86□□□□□ -1.15
CLSTN1-205ENST00000477264 FAT3Q8TDW7 4589 aa7.85□□□□□ -1.15
CLSTN1-205ENST00000477264 MT1HL1P0DM35 61 aa7.84□□□□□ -1.15
CLSTN1-205ENST00000477264 A0A0D9SG42 100 aa7.83□□□□□ -1.16
CLSTN1-205ENST00000477264 MYCBP2O75592 4640 aa7.83□□□□□ -1.16
CLSTN1-205ENST00000477264 DMBT1Q9UGM3 2413 aaPredicted RBP7.79□□□□□ -1.16
CLSTN1-205ENST00000477264 S4R3F8 94 aa7.78□□□□□ -1.16
CLSTN1-205ENST00000477264 NDUFAF8A1L188 74 aa7.78□□□□□ -1.16
CLSTN1-205ENST00000477264 PCLOQ9Y6V0 5065 aa7.77□□□□□ -1.17
CLSTN1-205ENST00000477264 C10orf95Q9H7T3 257 aa7.76□□□□□ -1.17
CLSTN1-205ENST00000477264 J3QL48 77 aa7.71□□□□□ -1.18
CLSTN1-205ENST00000477264 KRTAP12-2P59991 146 aa7.67□□□□□ -1.18
CLSTN1-205ENST00000477264 ABCA13Q86UQ4 5058 aa7.67□□□□□ -1.18
CLSTN1-205ENST00000477264 XP32Q5T750 250 aa7.66□□□□□ -1.18
CLSTN1-205ENST00000477264 KRTAP12-1P59990 96 aa7.64□□□□□ -1.19
CLSTN1-205ENST00000477264 M0QZ58 72 aa7.58□□□□□ -1.2
CLSTN1-205ENST00000477264 LCE2BO14633 110 aa7.56□□□□□ -1.2
CLSTN1-205ENST00000477264 LPAP08519 4548 aa7.37□□□□□ -1.23
CLSTN1-205ENST00000477264 PLAC4Q8WY50 150 aa7.32□□□□□ -1.24
CLSTN1-205ENST00000477264 HERC1Q15751 4861 aa7.31□□□□□ -1.24
CLSTN1-205ENST00000477264 LRP2P98164 4655 aa7.31□□□□□ -1.24
CLSTN1-205ENST00000477264 SEC61BP60468 96 aaKnown RBP7.3□□□□□ -1.24
CLSTN1-205ENST00000477264 A0A0A0MQY5 61 aa7.26□□□□□ -1.25
CLSTN1-205ENST00000477264 LUZP6Q538Z0 58 aa7.26□□□□□ -1.25
CLSTN1-205ENST00000477264 R4GN34 69 aa7.21□□□□□ -1.26
CLSTN1-205ENST00000477264 PP632Q6XCG6 107 aa7.2□□□□□ -1.26
CLSTN1-205ENST00000477264 HMCN2Q8NDA2 5059 aa7.13□□□□□ -1.27
CLSTN1-205ENST00000477264 LCE2CQ5TA81 110 aa7.09□□□□□ -1.27
CLSTN1-205ENST00000477264 MUC17Q685J3 4493 aa7.07□□□□□ -1.28
CLSTN1-205ENST00000477264 KRTAP4-1Q9BYQ7 146 aa7.06□□□□□ -1.28
CLSTN1-205ENST00000477264 LCE2AQ5TA79 106 aaPredicted RBP7.05□□□□□ -1.28
CLSTN1-205ENST00000477264 MUC2Q02817 5179 aa6.93□□□□□ -1.3
CLSTN1-205ENST00000477264 CAMK2N1Q7Z7J9 78 aa6.89□□□□□ -1.31
CLSTN1-205ENST00000477264 UBR4Q5T4S7 5183 aa6.89□□□□□ -1.31
CLSTN1-205ENST00000477264 LORP23490 312 aaPredicted RBP6.89□□□□□ -1.31
CLSTN1-205ENST00000477264 KRTAP23-1A1A580 65 aa6.88□□□□□ -1.31
CLSTN1-205ENST00000477264 KRTAP19-2Q3LHN2 52 aa6.85□□□□□ -1.31
CLSTN1-205ENST00000477264 SPRR5A0A1B0GTR4 108 aa6.82□□□□□ -1.32
CLSTN1-205ENST00000477264 RNF213Q63HN8 5207 aa6.75□□□□□ -1.33
CLSTN1-205ENST00000477264 TNP1P09430 55 aa6.75□□□□□ -1.33
CLSTN1-205ENST00000477264 FLGP20930 4061 aaPredicted RBP6.71□□□□□ -1.34
CLSTN1-205ENST00000477264 M0R2T5 61 aa6.64□□□□□ -1.35
CLSTN1-205ENST00000477264 MT1HP80294 61 aa6.61□□□□□ -1.35
CLSTN1-205ENST00000477264 FAT4Q6V0I7 4981 aa6.6□□□□□ -1.35
CLSTN1-205ENST00000477264 PRO2289Q9P1D8 64 aa6.52□□□□□ -1.36
CLSTN1-205ENST00000477264 INE1O15225 51 aa6.43□□□□□ -1.38
CLSTN1-205ENST00000477264 KRTAP9-8Q9BYQ0 159 aa6.35□□□□□ -1.39
CLSTN1-205ENST00000477264 KRTAP10-10P60014 251 aa6.34□□□□□ -1.39
CLSTN1-205ENST00000477264 MT2AP02795 61 aa6.34□□□□□ -1.4
CLSTN1-205ENST00000477264 MT1FP04733 61 aa6.3□□□□□ -1.4
CLSTN1-205ENST00000477264 SPRR2GQ9BYE4 73 aa6.28□□□□□ -1.4
CLSTN1-205ENST00000477264 LCE3AQ5TA76 89 aa6.25□□□□□ -1.41
CLSTN1-205ENST00000477264 KRTAP19-1Q8IUB9 90 aa6.18□□□□□ -1.42
CLSTN1-205ENST00000477264 KRTAP8-1Q8IUC2 63 aa6.18□□□□□ -1.42
CLSTN1-205ENST00000477264 KRTAP9-2Q9BYQ4 174 aa6.15□□□□□ -1.43
CLSTN1-205ENST00000477264 KRTAP9-3Q9BYQ3 159 aa6.12□□□□□ -1.43
CLSTN1-205ENST00000477264 LOC100996750A0A140TA64 210 aa6.06□□□□□ -1.44
CLSTN1-205ENST00000477264 KRTAP4-6Q9BYQ5 205 aa6.06□□□□□ -1.44
CLSTN1-205ENST00000477264 KRTAP19-8Q3LI54 63 aa6.04□□□□□ -1.44
CLSTN1-205ENST00000477264 KRTAP9-6A0A140TA67 174 aa5.97□□□□□ -1.45
CLSTN1-205ENST00000477264 KRTAP12-3P60328 96 aa5.97□□□□□ -1.45
CLSTN1-205ENST00000477264 MT1BP07438 61 aa5.96□□□□□ -1.46
CLSTN1-205ENST00000477264 KRTAP10-12P60413 245 aa5.91□□□□□ -1.46
CLSTN1-205ENST00000477264 KRTAP10-5P60370 271 aa5.85□□□□□ -1.47
CLSTN1-205ENST00000477264 MT1XP80297 61 aa5.83□□□□□ -1.48
CLSTN1-205ENST00000477264 CRCT1Q9UGL9 99 aa5.79□□□□□ -1.48
CLSTN1-205ENST00000477264 USH2AO75445 5202 aa5.74□□□□□ -1.49
CLSTN1-205ENST00000477264 FSIP2Q5CZC0 6907 aa5.71□□□□□ -1.49
CLSTN1-205ENST00000477264 KRTAP10-7P60409 375 aaPredicted RBP5.66□□□□□ -1.5
CLSTN1-205ENST00000477264 LCE3CQ5T5A8 94 aa5.65□□□□□ -1.5
CLSTN1-205ENST00000477264 KRTAP4-8Q9BYQ9 185 aa5.64□□□□□ -1.51
CLSTN1-205ENST00000477264 KRTAP19-6Q3LI70 58 aa5.59□□□□□ -1.51
CLSTN1-205ENST00000477264 SSPOA2VEC9 5147 aa5.57□□□□□ -1.52
CLSTN1-205ENST00000477264 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.56□□□□□ -1.52
CLSTN1-205ENST00000477264 KRTAP19-5Q3LI72 72 aa5.53□□□□□ -1.52
CLSTN1-205ENST00000477264 KRTAP4-12Q9BQ66 201 aa5.49□□□□□ -1.53
CLSTN1-205ENST00000477264 KRTAP2-3P0C7H8 128 aa5.48□□□□□ -1.53
CLSTN1-205ENST00000477264 KRTAP2-4Q9BYR9 128 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 172.2 ms