RNA–Protein interactions for RNA: ENST00000476941.5

TRPC1-203, Transcript of transient receptor potential cation channel subfamily C member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPC1, Length 3,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPC1-203ENST00000476941 LRP1Q07954 4544 aaKnown RBP10.06□□□□□ -0.8
TRPC1-203ENST00000476941 RPL37P61927 97 aaKnown RBP10.04□□□□□ -0.8
TRPC1-203ENST00000476941 A0A0D9SG42 100 aa10.04□□□□□ -0.8
TRPC1-203ENST00000476941 TPRXLQ17RH7 258 aa10.04□□□□□ -0.8
TRPC1-203ENST00000476941 RYR2Q92736 4967 aa9.99□□□□□ -0.81
TRPC1-203ENST00000476941 C10orf95Q9H7T3 257 aa9.98□□□□□ -0.81
TRPC1-203ENST00000476941 MYCBP2O75592 4640 aa9.97□□□□□ -0.81
TRPC1-203ENST00000476941 PKHD1L1Q86WI1 4243 aa9.97□□□□□ -0.81
TRPC1-203ENST00000476941 KRTAP21-3Q3LHN1 58 aa9.96□□□□□ -0.81
TRPC1-203ENST00000476941 NDUFAF8A1L188 74 aa9.96□□□□□ -0.82
TRPC1-203ENST00000476941 KRTAP13-4Q3LI77 160 aa9.93□□□□□ -0.82
TRPC1-203ENST00000476941 KRTAP10-6P60371 365 aaPredicted RBP9.89□□□□□ -0.83
TRPC1-203ENST00000476941 Q5VSD8 79 aa9.88□□□□□ -0.83
TRPC1-203ENST00000476941 KRTAP15-1Q3LI76 137 aa9.85□□□□□ -0.83
TRPC1-203ENST00000476941 HSPG2P98160 4391 aa9.82□□□□□ -0.84
TRPC1-203ENST00000476941 FAT3Q8TDW7 4589 aa9.82□□□□□ -0.84
TRPC1-203ENST00000476941 KRTAP10-8P60410 259 aa9.76□□□□□ -0.85
TRPC1-203ENST00000476941 KRTAP3-2Q9BYR7 98 aa9.76□□□□□ -0.85
TRPC1-203ENST00000476941 KRTAP3-3Q9BYR6 98 aa9.75□□□□□ -0.85
TRPC1-203ENST00000476941 TNXBP22105 4242 aa9.75□□□□□ -0.85
TRPC1-203ENST00000476941 S4R3F8 94 aa9.72□□□□□ -0.85
TRPC1-203ENST00000476941 XP32Q5T750 250 aa9.71□□□□□ -0.85
TRPC1-203ENST00000476941 KRTAP17-1Q9BYP8 105 aa9.7□□□□□ -0.86
TRPC1-203ENST00000476941 KIAA1109Q2LD37 5005 aa9.7□□□□□ -0.86
TRPC1-203ENST00000476941 RYR3Q15413 4870 aa9.69□□□□□ -0.86
TRPC1-203ENST00000476941 KRTAP12-2P59991 146 aa9.67□□□□□ -0.86
TRPC1-203ENST00000476941 RYR1P21817 5038 aa9.61□□□□□ -0.87
TRPC1-203ENST00000476941 LPAP08519 4548 aa9.54□□□□□ -0.88
TRPC1-203ENST00000476941 KRTAP12-1P59990 96 aa9.52□□□□□ -0.88
TRPC1-203ENST00000476941 LRP2P98164 4655 aa9.5□□□□□ -0.89
TRPC1-203ENST00000476941 MT1HL1P0DM35 61 aa9.5□□□□□ -0.89
TRPC1-203ENST00000476941 LUZP6Q538Z0 58 aa9.47□□□□□ -0.89
TRPC1-203ENST00000476941 EPPK1P58107 5090 aaKnown RBP9.38□□□□□ -0.91
TRPC1-203ENST00000476941 ABCA13Q86UQ4 5058 aa9.33□□□□□ -0.92
TRPC1-203ENST00000476941 KRTAP4-5Q9BYR2 181 aa9.28□□□□□ -0.92
TRPC1-203ENST00000476941 M0QZ58 72 aa9.27□□□□□ -0.93
TRPC1-203ENST00000476941 SEC61BP60468 96 aaKnown RBP9.25□□□□□ -0.93
TRPC1-203ENST00000476941 PLAC4Q8WY50 150 aa9.18□□□□□ -0.94
TRPC1-203ENST00000476941 J3QL48 77 aa9.02□□□□□ -0.97
TRPC1-203ENST00000476941 R4GN34 69 aa9.01□□□□□ -0.97
TRPC1-203ENST00000476941 KRTAP4-1Q9BYQ7 146 aa8.94□□□□□ -0.98
TRPC1-203ENST00000476941 LORP23490 312 aaPredicted RBP8.91□□□□□ -0.98
TRPC1-203ENST00000476941 MUC2Q02817 5179 aa8.9□□□□□ -0.98
TRPC1-203ENST00000476941 HERC2O95714 4834 aa8.89□□□□□ -0.99
TRPC1-203ENST00000476941 MUC17Q685J3 4493 aa8.82□□□□□ -1
TRPC1-203ENST00000476941 PP632Q6XCG6 107 aa8.73□□□□□ -1.01
TRPC1-203ENST00000476941 CAMK2N1Q7Z7J9 78 aa8.67□□□□□ -1.02
TRPC1-203ENST00000476941 HERC1Q15751 4861 aa8.58□□□□□ -1.04
TRPC1-203ENST00000476941 KRTAP19-2Q3LHN2 52 aa8.57□□□□□ -1.04
TRPC1-203ENST00000476941 FAT4Q6V0I7 4981 aa8.45□□□□□ -1.06
TRPC1-203ENST00000476941 PCLOQ9Y6V0 5065 aa8.41□□□□□ -1.06
TRPC1-203ENST00000476941 BIRC6Q9NR09 4857 aa8.41□□□□□ -1.06
TRPC1-203ENST00000476941 FLGP20930 4061 aaPredicted RBP8.41□□□□□ -1.06
TRPC1-203ENST00000476941 TNP1P09430 55 aa8.35□□□□□ -1.07
TRPC1-203ENST00000476941 SPRR5A0A1B0GTR4 108 aa8.33□□□□□ -1.08
TRPC1-203ENST00000476941 RNF213Q63HN8 5207 aa8.3□□□□□ -1.08
TRPC1-203ENST00000476941 HMCN2Q8NDA2 5059 aa8.28□□□□□ -1.08
TRPC1-203ENST00000476941 M0R2T5 61 aa8.27□□□□□ -1.09
TRPC1-203ENST00000476941 KRTAP23-1A1A580 65 aa8.18□□□□□ -1.1
TRPC1-203ENST00000476941 UBR4Q5T4S7 5183 aa8.15□□□□□ -1.1
TRPC1-203ENST00000476941 PRO2289Q9P1D8 64 aa8.14□□□□□ -1.11
TRPC1-203ENST00000476941 LCE2CQ5TA81 110 aa8.13□□□□□ -1.11
TRPC1-203ENST00000476941 KRTAP10-10P60014 251 aa7.99□□□□□ -1.13
TRPC1-203ENST00000476941 KRTAP19-1Q8IUB9 90 aa7.98□□□□□ -1.13
TRPC1-203ENST00000476941 MT1HP80294 61 aa7.96□□□□□ -1.14
TRPC1-203ENST00000476941 SPRR2GQ9BYE4 73 aa7.92□□□□□ -1.14
TRPC1-203ENST00000476941 MT1FP04733 61 aa7.88□□□□□ -1.15
TRPC1-203ENST00000476941 MT2AP02795 61 aa7.85□□□□□ -1.15
TRPC1-203ENST00000476941 LCE3AQ5TA76 89 aa7.85□□□□□ -1.15
TRPC1-203ENST00000476941 INE1O15225 51 aa7.84□□□□□ -1.15
TRPC1-203ENST00000476941 KRTAP9-8Q9BYQ0 159 aa7.74□□□□□ -1.17
TRPC1-203ENST00000476941 KRTAP8-1Q8IUC2 63 aa7.56□□□□□ -1.2
TRPC1-203ENST00000476941 MT1BP07438 61 aa7.55□□□□□ -1.2
TRPC1-203ENST00000476941 KRTAP19-8Q3LI54 63 aa7.52□□□□□ -1.21
TRPC1-203ENST00000476941 KRTAP10-5P60370 271 aa7.52□□□□□ -1.21
TRPC1-203ENST00000476941 MT1XP80297 61 aa7.51□□□□□ -1.21
TRPC1-203ENST00000476941 KRTAP12-3P60328 96 aa7.43□□□□□ -1.22
TRPC1-203ENST00000476941 USH2AO75445 5202 aa7.42□□□□□ -1.22
TRPC1-203ENST00000476941 KRTAP10-12P60413 245 aa7.41□□□□□ -1.22
TRPC1-203ENST00000476941 KRTAP10-7P60409 375 aaPredicted RBP7.4□□□□□ -1.22
TRPC1-203ENST00000476941 KRTAP9-3Q9BYQ3 159 aa7.4□□□□□ -1.23
TRPC1-203ENST00000476941 KMT2DO14686 5537 aa7.28□□□□□ -1.24
TRPC1-203ENST00000476941 LCE2BO14633 110 aa7.19□□□□□ -1.26
TRPC1-203ENST00000476941 KRTAP19-5Q3LI72 72 aa7.08□□□□□ -1.28
TRPC1-203ENST00000476941 KRTAP4-8A0A0G2JLE6 195 aa7.04□□□□□ -1.28
TRPC1-203ENST00000476941 KRTAP4-8Q9BYQ9 185 aa7.04□□□□□ -1.28
TRPC1-203ENST00000476941 LCE3CQ5T5A8 94 aa6.99□□□□□ -1.29
TRPC1-203ENST00000476941 FSIP2Q5CZC0 6907 aa6.96□□□□□ -1.3
TRPC1-203ENST00000476941 LCE2AQ5TA79 106 aaPredicted RBP6.92□□□□□ -1.3
TRPC1-203ENST00000476941 KRTAP9-6A8MVA2 160 aa6.84□□□□□ -1.31
TRPC1-203ENST00000476941 KRTAP4-7Q9BYR0 210 aa6.78□□□□□ -1.32
TRPC1-203ENST00000476941 KRTAP2-3P0C7H8 128 aa6.73□□□□□ -1.33
TRPC1-203ENST00000476941 KRTAP2-4Q9BYR9 128 aa6.73□□□□□ -1.33
TRPC1-203ENST00000476941 KRTAP2-1Q9BYU5 128 aa6.73□□□□□ -1.33
TRPC1-203ENST00000476941 KRTAP19-7Q3SYF9 63 aa6.68□□□□□ -1.34
TRPC1-203ENST00000476941 SSPOA2VEC9 5147 aa6.66□□□□□ -1.34
TRPC1-203ENST00000476941 MT1LQ93083 61 aa6.48□□□□□ -1.37
TRPC1-203ENST00000476941 MT1EP04732 61 aa6.48□□□□□ -1.37
TRPC1-203ENST00000476941 MUC12Q9UKN1 5478 aa6.42□□□□□ -1.38
TRPC1-203ENST00000476941 FCGBPQ9Y6R7 5405 aaPredicted RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms