RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 C14orf144Q96I85 54 aa1.22□□□□□ -2.21
PTCD3-211ENST00000476215 C12orf57Q99622 126 aa1.22□□□□□ -2.21
PTCD3-211ENST00000476215 HIGD1BQ9P298 99 aa1.22□□□□□ -2.21
PTCD3-211ENST00000476215 TRBV20-1A0A075B6N2 111 aa1.21□□□□□ -2.22
PTCD3-211ENST00000476215 A0A1B0GX51 115 aa1.21□□□□□ -2.22
PTCD3-211ENST00000476215 H3BMG7 143 aa1.21□□□□□ -2.22
PTCD3-211ENST00000476215 S100A6P06703 90 aa1.21□□□□□ -2.22
PTCD3-211ENST00000476215 FABP2P12104 132 aa1.21□□□□□ -2.22
PTCD3-211ENST00000476215 RAB37Q96AX2 223 aa1.21□□□□□ -2.22
PTCD3-211ENST00000476215 SS18L2Q9UHA2 77 aa1.21□□□□□ -2.22
PTCD3-211ENST00000476215 PRO1854Q9UHT4 67 aa1.21□□□□□ -2.22
PTCD3-211ENST00000476215 A0A087WSZ3 146 aa1.2□□□□□ -2.22
PTCD3-211ENST00000476215 TRBV7-4A0A0J9YYF1 115 aa1.2□□□□□ -2.22
PTCD3-211ENST00000476215 S100A1P23297 94 aa1.2□□□□□ -2.22
PTCD3-211ENST00000476215 SPATA45Q537H7 98 aa1.2□□□□□ -2.22
PTCD3-211ENST00000476215 ANKRD29Q8N6D5 301 aa1.2□□□□□ -2.22
PTCD3-211ENST00000476215 LINC00472Q9H8W2 130 aa1.2□□□□□ -2.22
PTCD3-211ENST00000476215 SNURFQ9Y675 71 aa1.2□□□□□ -2.22
PTCD3-211ENST00000476215 TMEM256-PLSCR3K7ERE1 68 aa1.19□□□□□ -2.22
PTCD3-211ENST00000476215 MT2AP02795 61 aa1.19□□□□□ -2.22
PTCD3-211ENST00000476215 FAM236DA0A1B0GTK5 79 aa1.18□□□□□ -2.22
PTCD3-211ENST00000476215 MT1FP04733 61 aa1.18□□□□□ -2.22
PTCD3-211ENST00000476215 CCKP06307 115 aa1.18□□□□□ -2.22
PTCD3-211ENST00000476215 COX6CP09669 75 aa1.18□□□□□ -2.22
PTCD3-211ENST00000476215 FAM236CP0DP71 79 aa1.18□□□□□ -2.22
PTCD3-211ENST00000476215 SIGMAR1Q99720 223 aa1.18□□□□□ -2.22
PTCD3-211ENST00000476215 VAMP8Q9BV40 100 aa1.18□□□□□ -2.22
PTCD3-211ENST00000476215 ORMDL1Q9P0S3 153 aa1.18□□□□□ -2.22
PTCD3-211ENST00000476215 A0A1B0GV72 72 aa1.17□□□□□ -2.22
PTCD3-211ENST00000476215 K7ERJ3 54 aa1.17□□□□□ -2.22
PTCD3-211ENST00000476215 DNAL4O96015 105 aa1.17□□□□□ -2.22
PTCD3-211ENST00000476215 BAALC-AS2P0C853 105 aa1.17□□□□□ -2.22
PTCD3-211ENST00000476215 RBM3P98179 157 aaKnown RBP1.17□□□□□ -2.22
PTCD3-211ENST00000476215 C9JAW5 83 aa1.16□□□□□ -2.22
PTCD3-211ENST00000476215 J3KT08 172 aa1.16□□□□□ -2.22
PTCD3-211ENST00000476215 TRACP01848 142 aa1.16□□□□□ -2.22
PTCD3-211ENST00000476215 SPINK7P58062 85 aa1.16□□□□□ -2.22
PTCD3-211ENST00000476215 HSD52Q0P140 79 aa1.16□□□□□ -2.22
PTCD3-211ENST00000476215 PYY3Q5JQD4 70 aa1.16□□□□□ -2.22
PTCD3-211ENST00000476215 Q6ZQT0 140 aa1.16□□□□□ -2.22
PTCD3-211ENST00000476215 DSCR8Q96T75 97 aa1.16□□□□□ -2.22
PTCD3-211ENST00000476215 VPS25Q9BRG1 176 aa1.16□□□□□ -2.22
PTCD3-211ENST00000476215 NDUFB1O75438 58 aa1.15□□□□□ -2.23
PTCD3-211ENST00000476215 UQCR10Q9UDW1 63 aa1.15□□□□□ -2.23
PTCD3-211ENST00000476215 LOC110117498A0A087WWA1 95 aa1.14□□□□□ -2.23
PTCD3-211ENST00000476215 PDE6GP18545 87 aa1.14□□□□□ -2.23
PTCD3-211ENST00000476215 KRTAP19-6Q3LI70 58 aa1.14□□□□□ -2.23
PTCD3-211ENST00000476215 LYRM7Q5U5X0 104 aa1.14□□□□□ -2.23
PTCD3-211ENST00000476215 PRR15Q8IV56 129 aa1.14□□□□□ -2.23
PTCD3-211ENST00000476215 LINC00846Q9NV44 126 aa1.14□□□□□ -2.23
PTCD3-211ENST00000476215 MACF1Q9UPN3 7388 aaKnown RBP1.13□□□□□ -2.23
PTCD3-211ENST00000476215 JMJD7-PLA2G4BH0Y9G9 81 aa1.13□□□□□ -2.23
PTCD3-211ENST00000476215 ATXN8Q156A1 80 aa1.13□□□□□ -2.23
PTCD3-211ENST00000476215 NREPQ16612 68 aa1.13□□□□□ -2.23
PTCD3-211ENST00000476215 H1FX-AS1Q4G0G2 97 aa1.13□□□□□ -2.23
PTCD3-211ENST00000476215 WFDC13Q8IUB5 93 aa1.13□□□□□ -2.23
PTCD3-211ENST00000476215 SYNE2Q8WXH0 6885 aaKnown RBP1.13□□□□□ -2.23
PTCD3-211ENST00000476215 MUC12Q9UKN1 5478 aa1.12□□□□□ -2.23
PTCD3-211ENST00000476215 hDV103S1A0JD37 113 aa1.12□□□□□ -2.23
PTCD3-211ENST00000476215 TMEM254Q8TBM7 123 aa1.12□□□□□ -2.23
PTCD3-211ENST00000476215 C14orf132Q9NPU4 83 aa1.12□□□□□ -2.23
PTCD3-211ENST00000476215 MMP24-AS1A0A0U1RRL7 71 aa1.11□□□□□ -2.23
PTCD3-211ENST00000476215 M0R143 59 aa1.11□□□□□ -2.23
PTCD3-211ENST00000476215 KRTAP5-10Q6L8G5 202 aa1.11□□□□□ -2.23
PTCD3-211ENST00000476215 MRPL34Q9BQ48 92 aaKnown RBP1.11□□□□□ -2.23
PTCD3-211ENST00000476215 MDN1Q9NU22 5596 aa1.11□□□□□ -2.23
PTCD3-211ENST00000476215 K7EQZ3 153 aa1.09□□□□□ -2.23
PTCD3-211ENST00000476215 TAX1BP3O14907 124 aa1.09□□□□□ -2.23
PTCD3-211ENST00000476215 CASC2Q6XLA1 102 aa1.09□□□□□ -2.23
PTCD3-211ENST00000476215 KMT2DO14686 5537 aa1.09□□□□□ -2.24
PTCD3-211ENST00000476215 A0A1W2PPM0 123 aa1.08□□□□□ -2.24
PTCD3-211ENST00000476215 HCG22E2RYF7 251 aa1.08□□□□□ -2.24
PTCD3-211ENST00000476215 TSTD3H0UI37 97 aa1.08□□□□□ -2.24
PTCD3-211ENST00000476215 CSAG1Q6PB30 78 aa1.08□□□□□ -2.24
PTCD3-211ENST00000476215 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
PTCD3-211ENST00000476215 A6NN06 94 aa1.07□□□□□ -2.24
PTCD3-211ENST00000476215 MT1BP07438 61 aa1.07□□□□□ -2.24
PTCD3-211ENST00000476215 SMIM6P0DI80 62 aa1.07□□□□□ -2.24
PTCD3-211ENST00000476215 KRTAP19-8Q3LI54 63 aa1.07□□□□□ -2.24
PTCD3-211ENST00000476215 SPRR2GQ9BYE4 73 aa1.07□□□□□ -2.24
PTCD3-211ENST00000476215 NEBP20929 6669 aa1.06□□□□□ -2.24
PTCD3-211ENST00000476215 FAM236AA0A1B0GUQ0 79 aa1.06□□□□□ -2.24
PTCD3-211ENST00000476215 FAM236BA0A1B0GV22 79 aa1.06□□□□□ -2.24
PTCD3-211ENST00000476215 LOC105371267A0A1B0GV96 52 aa1.06□□□□□ -2.24
PTCD3-211ENST00000476215 Q5VV11 94 aa1.06□□□□□ -2.24
PTCD3-211ENST00000476215 LCA10Q71F78 164 aa1.06□□□□□ -2.24
PTCD3-211ENST00000476215 UBL5Q9BZL1 73 aa1.06□□□□□ -2.24
PTCD3-211ENST00000476215 TP53AIP1Q9HCN2 124 aa1.06□□□□□ -2.24
PTCD3-211ENST00000476215 S4R3F8 94 aa1.06□□□□□ -2.24
PTCD3-211ENST00000476215 KLKP1Q107X0 134 aa1.05□□□□□ -2.24
PTCD3-211ENST00000476215 CYP4F30PQ9H0H9 118 aa1.05□□□□□ -2.24
PTCD3-211ENST00000476215 SPCS1Q9Y6A9 102 aa1.05□□□□□ -2.24
PTCD3-211ENST00000476215 A0A087WVE0 104 aa1.04□□□□□ -2.24
PTCD3-211ENST00000476215 COL5A1-AS1Q5SY13 56 aa1.04□□□□□ -2.24
PTCD3-211ENST00000476215 CRIPTQ9P021 101 aa1.04□□□□□ -2.24
PTCD3-211ENST00000476215 F8W1H4 67 aa1.03□□□□□ -2.24
PTCD3-211ENST00000476215 K7EP34 96 aa1.03□□□□□ -2.24
PTCD3-211ENST00000476215 KRTAP20-1Q3LI63 56 aa1.03□□□□□ -2.24
PTCD3-211ENST00000476215 IMUPQ9GZP8 106 aa1.03□□□□□ -2.24
PTCD3-211ENST00000476215 LOC101927531A0A1B0GV80 90 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms