RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 OCR1Q9BZK8 76 aa9.51□□□□□ -0.89
LIME1-204ENST00000476183 SYNE2Q8WXH0 6885 aaKnown RBP9.5□□□□□ -0.89
LIME1-204ENST00000476183 KLKP1Q107X0 134 aa9.5□□□□□ -0.89
LIME1-204ENST00000476183 MT1BP07438 61 aa9.49□□□□□ -0.89
LIME1-204ENST00000476183 LINC00208Q96KT6 92 aa9.49□□□□□ -0.89
LIME1-204ENST00000476183 KRTAP19-8Q3LI54 63 aa9.47□□□□□ -0.89
LIME1-204ENST00000476183 J3QR89 54 aa9.44□□□□□ -0.9
LIME1-204ENST00000476183 Q5VV11 94 aa9.43□□□□□ -0.9
LIME1-204ENST00000476183 MP68P56378 58 aa9.42□□□□□ -0.9
LIME1-204ENST00000476183 NDUFC1O43677 76 aa9.41□□□□□ -0.9
LIME1-204ENST00000476183 A8MUN3 132 aa9.4□□□□□ -0.9
LIME1-204ENST00000476183 IMUPQ9GZP8 106 aa9.38□□□□□ -0.91
LIME1-204ENST00000476183 CRIPTQ9P021 101 aa9.34□□□□□ -0.91
LIME1-204ENST00000476183 H0YAA0 97 aa9.33□□□□□ -0.92
LIME1-204ENST00000476183 A6NN06 94 aa9.31□□□□□ -0.92
LIME1-204ENST00000476183 H3BPC8 53 aa9.29□□□□□ -0.92
LIME1-204ENST00000476183 SCGB1A1P11684 91 aa9.28□□□□□ -0.92
LIME1-204ENST00000476183 ADM2Q7Z4H4 148 aa9.25□□□□□ -0.93
LIME1-204ENST00000476183 KRTAP10-5P60370 271 aa9.24□□□□□ -0.93
LIME1-204ENST00000476183 KRTAP6-3Q3LI67 103 aa9.23□□□□□ -0.93
LIME1-204ENST00000476183 DMAC1Q96GE9 116 aa9.2□□□□□ -0.94
LIME1-204ENST00000476183 MT-ATP8P03928 68 aa9.19□□□□□ -0.94
LIME1-204ENST00000476183 K7ERU9 68 aa9.11□□□□□ -0.95
LIME1-204ENST00000476183 P0C880 135 aa9.08□□□□□ -0.96
LIME1-204ENST00000476183 TRAV7A0A075B6U4 112 aa9.05□□□□□ -0.96
LIME1-204ENST00000476183 KRTAP3-2Q9BYR7 98 aa9.03□□□□□ -0.96
LIME1-204ENST00000476183 SMIM20Q8N5G0 67 aa9.02□□□□□ -0.97
LIME1-204ENST00000476183 R4GN34 69 aa8.98□□□□□ -0.97
LIME1-204ENST00000476183 C20orf197Q8N268 126 aa8.97□□□□□ -0.97
LIME1-204ENST00000476183 MUC12Q9UKN1 5478 aa8.96□□□□□ -0.98
LIME1-204ENST00000476183 ACYP2P14621 99 aa8.95□□□□□ -0.98
LIME1-204ENST00000476183 NEBP20929 6669 aa8.93□□□□□ -0.98
LIME1-204ENST00000476183 M0QZ58 72 aa8.93□□□□□ -0.98
LIME1-204ENST00000476183 MT1XP80297 61 aa8.91□□□□□ -0.98
LIME1-204ENST00000476183 PLAC4Q8WY50 150 aa8.9□□□□□ -0.98
LIME1-204ENST00000476183 SNURFQ9Y675 71 aa8.9□□□□□ -0.98
LIME1-204ENST00000476183 PRO2289Q9P1D8 64 aa8.85□□□□□ -0.99
LIME1-204ENST00000476183 KRTAP5-9P26371 169 aa8.84□□□□□ -0.99
LIME1-204ENST00000476183 KMT2DO14686 5537 aa8.83□□□□□ -1
LIME1-204ENST00000476183 LINC01554Q52M75 96 aa8.8□□□□□ -1
LIME1-204ENST00000476183 SPTSSBQ8NFR3 76 aa8.8□□□□□ -1
LIME1-204ENST00000476183 CHKB-CPT1BH3BT56 60 aa8.77□□□□□ -1.01
LIME1-204ENST00000476183 SERP2Q8N6R1 65 aa8.76□□□□□ -1.01
LIME1-204ENST00000476183 SPANXA2-OT1Q8N9U9 137 aa8.74□□□□□ -1.01
LIME1-204ENST00000476183 MDN1Q9NU22 5596 aa8.73□□□□□ -1.01
LIME1-204ENST00000476183 KRTAP12-2P59991 146 aa8.65□□□□□ -1.02
LIME1-204ENST00000476183 SPRR2FQ96RM1 72 aa8.59□□□□□ -1.03
LIME1-204ENST00000476183 KRTAP8-1Q8IUC2 63 aa8.56□□□□□ -1.04
LIME1-204ENST00000476183 KRTAP4-8A0A0G2JLE6 195 aa8.52□□□□□ -1.05
LIME1-204ENST00000476183 KRTAP10-7P60409 375 aaPredicted RBP8.52□□□□□ -1.05
LIME1-204ENST00000476183 KRTAP13-4Q3LI77 160 aa8.52□□□□□ -1.05
LIME1-204ENST00000476183 KRTAP4-8Q9BYQ9 185 aa8.52□□□□□ -1.05
LIME1-204ENST00000476183 KRTAP20-1Q3LI63 56 aa8.51□□□□□ -1.05
LIME1-204ENST00000476183 COA5Q86WW8 74 aa8.51□□□□□ -1.05
LIME1-204ENST00000476183 COX7CP15954 63 aa8.5□□□□□ -1.05
LIME1-204ENST00000476183 KRTAP10-12P60413 245 aa8.45□□□□□ -1.06
LIME1-204ENST00000476183 SPRR2EP22531 72 aa8.44□□□□□ -1.06
LIME1-204ENST00000476183 SPRR2BP35325 72 aa8.44□□□□□ -1.06
LIME1-204ENST00000476183 SPRR2AP35326 72 aa8.44□□□□□ -1.06
LIME1-204ENST00000476183 CYSTM1Q9H1C7 97 aa8.44□□□□□ -1.06
LIME1-204ENST00000476183 H7BZZ5 65 aa8.39□□□□□ -1.07
LIME1-204ENST00000476183 LCE1AQ5T7P2 110 aa8.37□□□□□ -1.07
LIME1-204ENST00000476183 KRTAP2-3P0C7H8 128 aa8.3□□□□□ -1.08
LIME1-204ENST00000476183 KRTAP2-4Q9BYR9 128 aa8.3□□□□□ -1.08
LIME1-204ENST00000476183 SEC61GP60059 68 aa8.28□□□□□ -1.08
LIME1-204ENST00000476183 SERP1Q9Y6X1 66 aa8.28□□□□□ -1.08
LIME1-204ENST00000476183 CAMK2N1Q7Z7J9 78 aa8.26□□□□□ -1.09
LIME1-204ENST00000476183 A0A0D9SG42 100 aa8.22□□□□□ -1.09
LIME1-204ENST00000476183 SPATA8Q6RVD6 105 aa8.22□□□□□ -1.09
LIME1-204ENST00000476183 ANAPC13Q9BS18 74 aa8.2□□□□□ -1.1
LIME1-204ENST00000476183 A0A1B0GU33 70 aa8.19□□□□□ -1.1
LIME1-204ENST00000476183 SPRR2DP22532 72 aa8.16□□□□□ -1.1
LIME1-204ENST00000476183 CCDC179H3BU77 68 aa8.1□□□□□ -1.11
LIME1-204ENST00000476183 SPINT4Q6UDR6 99 aa8.08□□□□□ -1.12
LIME1-204ENST00000476183 KRTAP12-1P59990 96 aa8.07□□□□□ -1.12
LIME1-204ENST00000476183 KRTAP2-2Q9BYT5 123 aa8.05□□□□□ -1.12
LIME1-204ENST00000476183 KRTAP2-1Q9BYU5 128 aa8.05□□□□□ -1.12
LIME1-204ENST00000476183 A0A1B0GU69 56 aa8.04□□□□□ -1.12
LIME1-204ENST00000476183 KRTAP19-7Q3SYF9 63 aa7.97□□□□□ -1.13
LIME1-204ENST00000476183 A8MU10 97 aa7.94□□□□□ -1.14
LIME1-204ENST00000476183 LCE3BQ5TA77 95 aa7.94□□□□□ -1.14
LIME1-204ENST00000476183 SMIM26A0A096LP01 95 aa7.93□□□□□ -1.14
LIME1-204ENST00000476183 ATP5EP56381 51 aaPredicted RBP7.91□□□□□ -1.14
LIME1-204ENST00000476183 MT1EP04732 61 aa7.89□□□□□ -1.15
LIME1-204ENST00000476183 LCE5AQ5TCM9 118 aa7.82□□□□□ -1.16
LIME1-204ENST00000476183 KRTAP19-3Q7Z4W3 81 aa7.8□□□□□ -1.16
LIME1-204ENST00000476183 PRR15LQ9BU68 103 aa7.79□□□□□ -1.16
LIME1-204ENST00000476183 LINC01558Q9Y6Z2 57 aa7.79□□□□□ -1.16
LIME1-204ENST00000476183 KRTAP19-5Q3LI72 72 aa7.78□□□□□ -1.16
LIME1-204ENST00000476183 TMEM258P61165 79 aa7.73□□□□□ -1.17
LIME1-204ENST00000476183 C10orf95Q9H7T3 257 aa7.73□□□□□ -1.17
LIME1-204ENST00000476183 DSTQ03001 7570 aaKnown RBP7.67□□□□□ -1.18
LIME1-204ENST00000476183 TNP1P09430 55 aa7.63□□□□□ -1.19
LIME1-204ENST00000476183 LCE3AQ5TA76 89 aa7.62□□□□□ -1.19
LIME1-204ENST00000476183 MT1GP13640 62 aa7.6□□□□□ -1.19
LIME1-204ENST00000476183 UQCR11O14957 56 aa7.55□□□□□ -1.2
LIME1-204ENST00000476183 MT1LQ93083 61 aa7.55□□□□□ -1.2
LIME1-204ENST00000476183 PP632Q6XCG6 107 aa7.5□□□□□ -1.21
LIME1-204ENST00000476183 MT1MQ8N339 61 aa7.5□□□□□ -1.21
LIME1-204ENST00000476183 MIR22HGQ0VDD5 57 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms