RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-208ENST00000475997 DNAH17Q9UFH2 4485 aa3.08□□□□□ -1.92
HNRNPU-208ENST00000475997 KRTAP21-3Q3LHN1 58 aa3.08□□□□□ -1.92
HNRNPU-208ENST00000475997 KRTAP13-4Q3LI77 160 aa3.07□□□□□ -1.92
HNRNPU-208ENST00000475997 A0A1B0GVY2 172 aa3.07□□□□□ -1.92
HNRNPU-208ENST00000475997 LRP1BQ9NZR2 4599 aa3.07□□□□□ -1.92
HNRNPU-208ENST00000475997 DNAH2Q9P225 4427 aa3.06□□□□□ -1.92
HNRNPU-208ENST00000475997 DNHD1Q96M86 4753 aa3.05□□□□□ -1.92
HNRNPU-208ENST00000475997 TPRXLQ17RH7 258 aa3.05□□□□□ -1.92
HNRNPU-208ENST00000475997 FRAS1Q86XX4 4008 aa3.05□□□□□ -1.92
HNRNPU-208ENST00000475997 DNAH5Q8TE73 4624 aa3.03□□□□□ -1.92
HNRNPU-208ENST00000475997 KRTAP12-2P59991 146 aa3.03□□□□□ -1.92
HNRNPU-208ENST00000475997 HECTD4Q9Y4D8 3996 aa3.01□□□□□ -1.93
HNRNPU-208ENST00000475997 KRTAP10-10P60014 251 aa3.01□□□□□ -1.93
HNRNPU-208ENST00000475997 FAT1Q14517 4588 aa3□□□□□ -1.93
HNRNPU-208ENST00000475997 DNAH6Q9C0G6 4158 aa3□□□□□ -1.93
HNRNPU-208ENST00000475997 KRTAP12-1P59990 96 aa3□□□□□ -1.93
HNRNPU-208ENST00000475997 KRTAP10-4P60372 401 aaPredicted RBP2.99□□□□□ -1.93
HNRNPU-208ENST00000475997 DYNC2H1Q8NCM8 4307 aaKnown RBP2.99□□□□□ -1.93
HNRNPU-208ENST00000475997 VPS13BQ7Z7G8 4022 aa2.97□□□□□ -1.93
HNRNPU-208ENST00000475997 KRTAP10-6P60371 365 aaPredicted RBP2.97□□□□□ -1.93
HNRNPU-208ENST00000475997 KRTAP15-1Q3LI76 137 aa2.94□□□□□ -1.94
HNRNPU-208ENST00000475997 DYNC1H1Q14204 4646 aaKnown RBP2.94□□□□□ -1.94
HNRNPU-208ENST00000475997 KRTAP3-3Q9BYR6 98 aa2.94□□□□□ -1.94
HNRNPU-208ENST00000475997 ALMS1Q8TCU4 4167 aa2.92□□□□□ -1.94
HNRNPU-208ENST00000475997 KRTAP3-2Q9BYR7 98 aa2.91□□□□□ -1.94
HNRNPU-208ENST00000475997 HYDINQ4G0P3 5121 aa2.9□□□□□ -1.95
HNRNPU-208ENST00000475997 MYCBP2O75592 4640 aa2.89□□□□□ -1.95
HNRNPU-208ENST00000475997 MT1HL1P0DM35 61 aa2.89□□□□□ -1.95
HNRNPU-208ENST00000475997 PKHD1P08F94 4074 aa2.87□□□□□ -1.95
HNRNPU-208ENST00000475997 SACSQ9NZJ4 4579 aa2.87□□□□□ -1.95
HNRNPU-208ENST00000475997 LRP1Q07954 4544 aaKnown RBP2.85□□□□□ -1.95
HNRNPU-208ENST00000475997 FAT2Q9NYQ8 4349 aa2.84□□□□□ -1.95
HNRNPU-208ENST00000475997 APOBP04114 4563 aaKnown RBP2.83□□□□□ -1.96
HNRNPU-208ENST00000475997 PKD1P98161 4303 aa2.82□□□□□ -1.96
HNRNPU-208ENST00000475997 KIAA1109Q2LD37 5005 aa2.8□□□□□ -1.96
HNRNPU-208ENST00000475997 KRTAP23-1A1A580 65 aa2.79□□□□□ -1.96
HNRNPU-208ENST00000475997 FAT3Q8TDW7 4589 aa2.79□□□□□ -1.96
HNRNPU-208ENST00000475997 KRTAP4-5Q9BYR2 181 aa2.79□□□□□ -1.96
HNRNPU-208ENST00000475997 RYR1P21817 5038 aa2.78□□□□□ -1.96
HNRNPU-208ENST00000475997 RYR3Q15413 4870 aa2.74□□□□□ -1.97
HNRNPU-208ENST00000475997 LORP23490 312 aaPredicted RBP2.73□□□□□ -1.97
HNRNPU-208ENST00000475997 LRP2P98164 4655 aa2.72□□□□□ -1.97
HNRNPU-208ENST00000475997 KMT2CQ8NEZ4 4911 aaKnown RBP2.72□□□□□ -1.97
HNRNPU-208ENST00000475997 RYR2Q92736 4967 aa2.71□□□□□ -1.98
HNRNPU-208ENST00000475997 KRTAP10-12P60413 245 aa2.7□□□□□ -1.98
HNRNPU-208ENST00000475997 HSPG2P98160 4391 aa2.7□□□□□ -1.98
HNRNPU-208ENST00000475997 KRTAP12-3P60328 96 aa2.68□□□□□ -1.98
HNRNPU-208ENST00000475997 KRTAP4-1Q9BYQ7 146 aa2.67□□□□□ -1.98
HNRNPU-208ENST00000475997 PKHD1L1Q86WI1 4243 aa2.64□□□□□ -1.99
HNRNPU-208ENST00000475997 TNXBP22105 4242 aa2.61□□□□□ -1.99
HNRNPU-208ENST00000475997 LPAP08519 4548 aa2.61□□□□□ -1.99
HNRNPU-208ENST00000475997 CRCT1Q9UGL9 99 aa2.6□□□□□ -1.99
HNRNPU-208ENST00000475997 LCE3AQ5TA76 89 aa2.57□□□□□ -2
HNRNPU-208ENST00000475997 KRTAP10-5P60370 271 aa2.56□□□□□ -2
HNRNPU-208ENST00000475997 HERC2O95714 4834 aa2.55□□□□□ -2
HNRNPU-208ENST00000475997 EPPK1P58107 5090 aaKnown RBP2.53□□□□□ -2
HNRNPU-208ENST00000475997 LCE2DQ5TA82 110 aaPredicted RBP2.53□□□□□ -2
HNRNPU-208ENST00000475997 ABCA13Q86UQ4 5058 aa2.51□□□□□ -2.01
HNRNPU-208ENST00000475997 MUC2Q02817 5179 aa2.45□□□□□ -2.02
HNRNPU-208ENST00000475997 KRTAP19-2Q3LHN2 52 aa2.45□□□□□ -2.02
HNRNPU-208ENST00000475997 SPRR2GQ9BYE4 73 aa2.44□□□□□ -2.02
HNRNPU-208ENST00000475997 MT1HP80294 61 aa2.43□□□□□ -2.02
HNRNPU-208ENST00000475997 KRTAP19-4Q3LI73 84 aa2.43□□□□□ -2.02
HNRNPU-208ENST00000475997 MT2AP02795 61 aa2.41□□□□□ -2.02
HNRNPU-208ENST00000475997 MUC17Q685J3 4493 aa2.41□□□□□ -2.02
HNRNPU-208ENST00000475997 KRTAP19-1Q8IUB9 90 aa2.41□□□□□ -2.02
HNRNPU-208ENST00000475997 MT1FP04733 61 aa2.41□□□□□ -2.02
HNRNPU-208ENST00000475997 FLGP20930 4061 aaPredicted RBP2.38□□□□□ -2.03
HNRNPU-208ENST00000475997 KRTAP8-1Q8IUC2 63 aa2.38□□□□□ -2.03
HNRNPU-208ENST00000475997 LCE2CQ5TA81 110 aa2.38□□□□□ -2.03
HNRNPU-208ENST00000475997 HERC1Q15751 4861 aa2.36□□□□□ -2.03
HNRNPU-208ENST00000475997 FAT4Q6V0I7 4981 aa2.36□□□□□ -2.03
HNRNPU-208ENST00000475997 BIRC6Q9NR09 4857 aa2.35□□□□□ -2.03
HNRNPU-208ENST00000475997 RNF213Q63HN8 5207 aa2.34□□□□□ -2.04
HNRNPU-208ENST00000475997 PCLOQ9Y6V0 5065 aa2.32□□□□□ -2.04
HNRNPU-208ENST00000475997 KRTAP9-8Q9BYQ0 159 aa2.31□□□□□ -2.04
HNRNPU-208ENST00000475997 LCE3CQ5T5A8 94 aa2.3□□□□□ -2.04
HNRNPU-208ENST00000475997 KRTAP19-8Q3LI54 63 aa2.3□□□□□ -2.04
HNRNPU-208ENST00000475997 SPRR5A0A1B0GTR4 108 aa2.3□□□□□ -2.04
HNRNPU-208ENST00000475997 MT1BP07438 61 aa2.28□□□□□ -2.04
HNRNPU-208ENST00000475997 MT1XP80297 61 aa2.28□□□□□ -2.04
HNRNPU-208ENST00000475997 KRTAP10-7P60409 375 aaPredicted RBP2.27□□□□□ -2.05
HNRNPU-208ENST00000475997 HMCN2Q8NDA2 5059 aa2.26□□□□□ -2.05
HNRNPU-208ENST00000475997 UBR4Q5T4S7 5183 aa2.26□□□□□ -2.05
HNRNPU-208ENST00000475997 LOC100996750A0A140TA64 210 aa2.26□□□□□ -2.05
HNRNPU-208ENST00000475997 KRTAP4-6Q9BYQ5 205 aa2.26□□□□□ -2.05
HNRNPU-208ENST00000475997 KRTAP19-5Q3LI72 72 aa2.23□□□□□ -2.05
HNRNPU-208ENST00000475997 KRTAP12-4P60329 112 aa2.22□□□□□ -2.05
HNRNPU-208ENST00000475997 KRTAP9-3Q9BYQ3 159 aa2.22□□□□□ -2.05
HNRNPU-208ENST00000475997 KRTAP4-8A0A0G2JLE6 195 aa2.17□□□□□ -2.06
HNRNPU-208ENST00000475997 KRTAP4-8Q9BYQ9 185 aa2.17□□□□□ -2.06
HNRNPU-208ENST00000475997 LCE2BO14633 110 aa2.15□□□□□ -2.07
HNRNPU-208ENST00000475997 SPRR2FQ96RM1 72 aa2.13□□□□□ -2.07
HNRNPU-208ENST00000475997 FSIP2Q5CZC0 6907 aa2.12□□□□□ -2.07
HNRNPU-208ENST00000475997 LCE3DQ9BYE3 92 aa2.11□□□□□ -2.07
HNRNPU-208ENST00000475997 LCE3EQ5T5B0 92 aa2.11□□□□□ -2.07
HNRNPU-208ENST00000475997 LCE3BQ5TA77 95 aa2.1□□□□□ -2.07
HNRNPU-208ENST00000475997 MT3P25713 68 aa2.09□□□□□ -2.08
HNRNPU-208ENST00000475997 KRTAP4-7Q9BYR0 210 aa2.08□□□□□ -2.08
HNRNPU-208ENST00000475997 USH2AO75445 5202 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms