RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 C9orf92A6NGG3 77 aa5.48□□□□□ -1.53
ABCF1-205ENST00000475993 KRTAP21-3Q3LHN1 58 aa5.48□□□□□ -1.53
ABCF1-205ENST00000475993 KRTAP10-1P60331 282 aa5.46□□□□□ -1.53
ABCF1-205ENST00000475993 S4R3F8 94 aa5.41□□□□□ -1.54
ABCF1-205ENST00000475993 PKD1P98161 4303 aa5.39□□□□□ -1.55
ABCF1-205ENST00000475993 KRTAP12-2P59991 146 aa5.37□□□□□ -1.55
ABCF1-205ENST00000475993 LCE2CQ5TA81 110 aa5.37□□□□□ -1.55
ABCF1-205ENST00000475993 LCE2BO14633 110 aa5.35□□□□□ -1.55
ABCF1-205ENST00000475993 SACSQ9NZJ4 4579 aa5.34□□□□□ -1.55
ABCF1-205ENST00000475993 XP32Q5T750 250 aa5.34□□□□□ -1.55
ABCF1-205ENST00000475993 PLAC4Q8WY50 150 aa5.34□□□□□ -1.55
ABCF1-205ENST00000475993 FAT2Q9NYQ8 4349 aa5.33□□□□□ -1.56
ABCF1-205ENST00000475993 DNHD1Q96M86 4753 aa5.32□□□□□ -1.56
ABCF1-205ENST00000475993 KRTAP12-1P59990 96 aa5.31□□□□□ -1.56
ABCF1-205ENST00000475993 PKHD1L1Q86WI1 4243 aa5.3□□□□□ -1.56
ABCF1-205ENST00000475993 LCE2AQ5TA79 106 aaPredicted RBP5.28□□□□□ -1.56
ABCF1-205ENST00000475993 PKHD1P08F94 4074 aa5.22□□□□□ -1.57
ABCF1-205ENST00000475993 KRTAP10-8P60410 259 aa5.21□□□□□ -1.58
ABCF1-205ENST00000475993 HYDINQ4G0P3 5121 aa5.18□□□□□ -1.58
ABCF1-205ENST00000475993 CAMK2N1Q7Z7J9 78 aa5.18□□□□□ -1.58
ABCF1-205ENST00000475993 M0QZ58 72 aa5.16□□□□□ -1.58
ABCF1-205ENST00000475993 APOBP04114 4563 aaKnown RBP5.15□□□□□ -1.59
ABCF1-205ENST00000475993 SMR3BP02814 79 aaPredicted RBP5.14□□□□□ -1.59
ABCF1-205ENST00000475993 KRTAP10-4P60372 401 aaPredicted RBP5.13□□□□□ -1.59
ABCF1-205ENST00000475993 LRP1Q07954 4544 aaKnown RBP5.11□□□□□ -1.59
ABCF1-205ENST00000475993 HSPG2P98160 4391 aa5.08□□□□□ -1.6
ABCF1-205ENST00000475993 FAT1Q14517 4588 aa5.07□□□□□ -1.6
ABCF1-205ENST00000475993 DYNC1H1Q14204 4646 aaKnown RBP5.06□□□□□ -1.6
ABCF1-205ENST00000475993 FAT3Q8TDW7 4589 aa5.06□□□□□ -1.6
ABCF1-205ENST00000475993 TNXBP22105 4242 aa5.05□□□□□ -1.6
ABCF1-205ENST00000475993 A0A1B0GVY2 172 aa5.02□□□□□ -1.61
ABCF1-205ENST00000475993 PRO2289Q9P1D8 64 aa5.02□□□□□ -1.61
ABCF1-205ENST00000475993 MYCBP2O75592 4640 aa4.98□□□□□ -1.61
ABCF1-205ENST00000475993 LORP23490 312 aaPredicted RBP4.94□□□□□ -1.62
ABCF1-205ENST00000475993 R4GN34 69 aa4.92□□□□□ -1.62
ABCF1-205ENST00000475993 PP632Q6XCG6 107 aa4.91□□□□□ -1.62
ABCF1-205ENST00000475993 KRTAP23-1A1A580 65 aa4.88□□□□□ -1.63
ABCF1-205ENST00000475993 LPAP08519 4548 aa4.85□□□□□ -1.63
ABCF1-205ENST00000475993 KMT2CQ8NEZ4 4911 aaKnown RBP4.81□□□□□ -1.64
ABCF1-205ENST00000475993 RYR2Q92736 4967 aa4.78□□□□□ -1.64
ABCF1-205ENST00000475993 SPRR5A0A1B0GTR4 108 aa4.77□□□□□ -1.65
ABCF1-205ENST00000475993 INE1O15225 51 aa4.74□□□□□ -1.65
ABCF1-205ENST00000475993 LRP2P98164 4655 aa4.73□□□□□ -1.65
ABCF1-205ENST00000475993 Q5VSD8 79 aa4.73□□□□□ -1.65
ABCF1-205ENST00000475993 MT1HL1P0DM35 61 aa4.67□□□□□ -1.66
ABCF1-205ENST00000475993 RYR3Q15413 4870 aa4.62□□□□□ -1.67
ABCF1-205ENST00000475993 TNP1P09430 55 aa4.6□□□□□ -1.67
ABCF1-205ENST00000475993 KIAA1109Q2LD37 5005 aa4.59□□□□□ -1.67
ABCF1-205ENST00000475993 RYR1P21817 5038 aa4.59□□□□□ -1.67
ABCF1-205ENST00000475993 KRTAP17-1Q9BYP8 105 aa4.57□□□□□ -1.68
ABCF1-205ENST00000475993 MUC17Q685J3 4493 aa4.54□□□□□ -1.68
ABCF1-205ENST00000475993 EPPK1P58107 5090 aaKnown RBP4.49□□□□□ -1.69
ABCF1-205ENST00000475993 KRTAP19-2Q3LHN2 52 aa4.48□□□□□ -1.69
ABCF1-205ENST00000475993 KRTAP4-1Q9BYQ7 146 aa4.48□□□□□ -1.69
ABCF1-205ENST00000475993 ABCA13Q86UQ4 5058 aa4.41□□□□□ -1.7
ABCF1-205ENST00000475993 BIRC6Q9NR09 4857 aa4.41□□□□□ -1.7
ABCF1-205ENST00000475993 KRTAP4-5Q9BYR2 181 aa4.35□□□□□ -1.71
ABCF1-205ENST00000475993 MUC2Q02817 5179 aa4.34□□□□□ -1.71
ABCF1-205ENST00000475993 FLGP20930 4061 aaPredicted RBP4.34□□□□□ -1.71
ABCF1-205ENST00000475993 LCE3AQ5TA76 89 aa4.32□□□□□ -1.72
ABCF1-205ENST00000475993 HERC1Q15751 4861 aa4.29□□□□□ -1.72
ABCF1-205ENST00000475993 HERC2O95714 4834 aa4.23□□□□□ -1.73
ABCF1-205ENST00000475993 KRTAP8-1Q8IUC2 63 aa4.23□□□□□ -1.73
ABCF1-205ENST00000475993 SPRR2GQ9BYE4 73 aa4.23□□□□□ -1.73
ABCF1-205ENST00000475993 PCLOQ9Y6V0 5065 aa4.21□□□□□ -1.73
ABCF1-205ENST00000475993 KRTAP19-1Q8IUB9 90 aa4.19□□□□□ -1.74
ABCF1-205ENST00000475993 KRTAP10-12P60413 245 aa4.13□□□□□ -1.75
ABCF1-205ENST00000475993 KRTAP10-10P60014 251 aa4.12□□□□□ -1.75
ABCF1-205ENST00000475993 FAT4Q6V0I7 4981 aa4.11□□□□□ -1.75
ABCF1-205ENST00000475993 KRTAP12-3P60328 96 aa4.09□□□□□ -1.75
ABCF1-205ENST00000475993 RNF213Q63HN8 5207 aa4.05□□□□□ -1.76
ABCF1-205ENST00000475993 KRTAP10-5P60370 271 aa4□□□□□ -1.77
ABCF1-205ENST00000475993 MT1XP80297 61 aa3.98□□□□□ -1.77
ABCF1-205ENST00000475993 KRTAP19-8Q3LI54 63 aa3.97□□□□□ -1.77
ABCF1-205ENST00000475993 MT1FP04733 61 aa3.94□□□□□ -1.78
ABCF1-205ENST00000475993 UBR4Q5T4S7 5183 aa3.93□□□□□ -1.78
ABCF1-205ENST00000475993 M0R2T5 61 aa3.93□□□□□ -1.78
ABCF1-205ENST00000475993 HMCN2Q8NDA2 5059 aa3.93□□□□□ -1.78
ABCF1-205ENST00000475993 MT2AP02795 61 aa3.92□□□□□ -1.78
ABCF1-205ENST00000475993 MT1BP07438 61 aa3.91□□□□□ -1.78
ABCF1-205ENST00000475993 KRTAP10-7P60409 375 aaPredicted RBP3.89□□□□□ -1.79
ABCF1-205ENST00000475993 LCE3CQ5T5A8 94 aa3.89□□□□□ -1.79
ABCF1-205ENST00000475993 MT1HP80294 61 aa3.87□□□□□ -1.79
ABCF1-205ENST00000475993 KRTAP9-8Q9BYQ0 159 aa3.86□□□□□ -1.79
ABCF1-205ENST00000475993 KRTAP2-3P0C7H8 128 aa3.82□□□□□ -1.8
ABCF1-205ENST00000475993 KRTAP2-4Q9BYR9 128 aa3.82□□□□□ -1.8
ABCF1-205ENST00000475993 KRTAP2-1Q9BYU5 128 aa3.82□□□□□ -1.8
ABCF1-205ENST00000475993 KRTAP9-6A8MVA2 160 aa3.81□□□□□ -1.8
ABCF1-205ENST00000475993 KRTAP19-5Q3LI72 72 aa3.8□□□□□ -1.8
ABCF1-205ENST00000475993 LCE4AQ5TA78 99 aa3.72□□□□□ -1.81
ABCF1-205ENST00000475993 KRTAP9-4Q9BYQ2 154 aa3.71□□□□□ -1.82
ABCF1-205ENST00000475993 KRTAP9-3Q9BYQ3 159 aa3.67□□□□□ -1.82
ABCF1-205ENST00000475993 LCE5AQ5TCM9 118 aa3.66□□□□□ -1.82
ABCF1-205ENST00000475993 USH2AO75445 5202 aa3.65□□□□□ -1.82
ABCF1-205ENST00000475993 KRTAP9-9Q9BYP9 154 aa3.65□□□□□ -1.83
ABCF1-205ENST00000475993 KRTAP9-6A0A140TA67 174 aa3.63□□□□□ -1.83
ABCF1-205ENST00000475993 KRTAP9-7A8MTY7 169 aa3.63□□□□□ -1.83
ABCF1-205ENST00000475993 KRTAP4-7Q9BYR0 210 aa3.59□□□□□ -1.84
ABCF1-205ENST00000475993 KMT2DO14686 5537 aa3.56□□□□□ -1.84
ABCF1-205ENST00000475993 KRTAP4-8A0A0G2JLE6 195 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms