RNA–Protein interactions for RNA: ENST00000475560.5

SRGAP3-205, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-205ENST00000475560 NEBP20929 6669 aa1.32□□□□□ -2.2
SRGAP3-205ENST00000475560 LYNX1G3V0Z9 82 aa1.32□□□□□ -2.2
SRGAP3-205ENST00000475560 H0YGG7 62 aa1.32□□□□□ -2.2
SRGAP3-205ENST00000475560 K7EIM0 57 aa1.32□□□□□ -2.2
SRGAP3-205ENST00000475560 MINOS1Q5TGZ0 78 aa1.31□□□□□ -2.2
SRGAP3-205ENST00000475560 C6orf48Q9UBA6 75 aa1.31□□□□□ -2.2
SRGAP3-205ENST00000475560 WFDC10BQ8IUB3 73 aa1.3□□□□□ -2.2
SRGAP3-205ENST00000475560 WFDC13Q8IUB5 93 aa1.3□□□□□ -2.2
SRGAP3-205ENST00000475560 PRO0255Q9UI72 69 aa1.3□□□□□ -2.2
SRGAP3-205ENST00000475560 TOMM7Q9P0U1 55 aa1.29□□□□□ -2.2
SRGAP3-205ENST00000475560 AKAP9Q99996 3911 aa1.29□□□□□ -2.2
SRGAP3-205ENST00000475560 DEFB131AP59861 70 aa1.28□□□□□ -2.2
SRGAP3-205ENST00000475560 KLK9Q2XQG4 91 aa1.28□□□□□ -2.2
SRGAP3-205ENST00000475560 KAAG1Q9UBP8 84 aa1.28□□□□□ -2.2
SRGAP3-205ENST00000475560 PRKDCP78527 4128 aaKnown RBP1.28□□□□□ -2.2
SRGAP3-205ENST00000475560 STAB2Q8WWQ8 2551 aa1.27□□□□□ -2.21
SRGAP3-205ENST00000475560 COX6B2Q6YFQ2 88 aa1.27□□□□□ -2.21
SRGAP3-205ENST00000475560 DEFB104AQ8WTQ1 72 aa1.27□□□□□ -2.21
SRGAP3-205ENST00000475560 SYNE2Q8WXH0 6885 aaKnown RBP1.27□□□□□ -2.21
SRGAP3-205ENST00000475560 ANK2Q01484 3957 aa1.26□□□□□ -2.21
SRGAP3-205ENST00000475560 MMP24-AS1A0A0U1RRL7 71 aa1.26□□□□□ -2.21
SRGAP3-205ENST00000475560 ALMS1Q8TCU4 4167 aa1.26□□□□□ -2.21
SRGAP3-205ENST00000475560 RNF213Q63HN8 5207 aa1.26□□□□□ -2.21
SRGAP3-205ENST00000475560 SSPOA2VEC9 5147 aa1.25□□□□□ -2.21
SRGAP3-205ENST00000475560 H0YAA0 97 aa1.25□□□□□ -2.21
SRGAP3-205ENST00000475560 MRPL34Q9BQ48 92 aaKnown RBP1.25□□□□□ -2.21
SRGAP3-205ENST00000475560 CRIPTQ9P021 101 aa1.25□□□□□ -2.21
SRGAP3-205ENST00000475560 PKDREJQ9NTG1 2253 aa1.25□□□□□ -2.21
SRGAP3-205ENST00000475560 A8MTW9 85 aa1.24□□□□□ -2.21
SRGAP3-205ENST00000475560 APELAP0DMC3 54 aa1.24□□□□□ -2.21
SRGAP3-205ENST00000475560 DEFB110Q30KQ9 67 aa1.24□□□□□ -2.21
SRGAP3-205ENST00000475560 KRTAP20-1Q3LI63 56 aa1.24□□□□□ -2.21
SRGAP3-205ENST00000475560 DEFB124Q8NES8 71 aa1.24□□□□□ -2.21
SRGAP3-205ENST00000475560 WNK2Q9Y3S1 2297 aa1.24□□□□□ -2.21
SRGAP3-205ENST00000475560 TACC2O95359 2948 aa1.23□□□□□ -2.21
SRGAP3-205ENST00000475560 COL7A1Q02388 2944 aa1.23□□□□□ -2.21
SRGAP3-205ENST00000475560 USMG5Q96IX5 58 aa1.22□□□□□ -2.21
SRGAP3-205ENST00000475560 VPS13CQ709C8 3753 aa1.22□□□□□ -2.21
SRGAP3-205ENST00000475560 DEFB109BQ30KR1 87 aa1.21□□□□□ -2.22
SRGAP3-205ENST00000475560 H1FX-AS1Q4G0G2 97 aa1.21□□□□□ -2.22
SRGAP3-205ENST00000475560 CLPSL2Q6UWE3 100 aa1.21□□□□□ -2.22
SRGAP3-205ENST00000475560 AHNAK2Q8IVF2 5795 aa1.21□□□□□ -2.22
SRGAP3-205ENST00000475560 H3BUA1 57 aa1.2□□□□□ -2.22
SRGAP3-205ENST00000475560 DEFB105AQ8NG35 78 aa1.2□□□□□ -2.22
SRGAP3-205ENST00000475560 SMR3AQ99954 134 aa1.2□□□□□ -2.22
SRGAP3-205ENST00000475560 MACF1Q9UPN3 7388 aaKnown RBP1.2□□□□□ -2.22
SRGAP3-205ENST00000475560 HMCN2Q8NDA2 5059 aa1.19□□□□□ -2.22
SRGAP3-205ENST00000475560 SPRR1AP35321 89 aa1.19□□□□□ -2.22
SRGAP3-205ENST00000475560 RHPN1-AS1Q9BWJ2 59 aa1.19□□□□□ -2.22
SRGAP3-205ENST00000475560 AKAP6Q13023 2319 aa1.18□□□□□ -2.22
SRGAP3-205ENST00000475560 SACSQ9NZJ4 4579 aa1.18□□□□□ -2.22
SRGAP3-205ENST00000475560 DEFB130BP0DP73 79 aa1.18□□□□□ -2.22
SRGAP3-205ENST00000475560 DEFB130AP0DP74 79 aa1.18□□□□□ -2.22
SRGAP3-205ENST00000475560 DYNC2H1Q8NCM8 4307 aaKnown RBP1.17□□□□□ -2.22
SRGAP3-205ENST00000475560 SPRR1BP22528 89 aa1.17□□□□□ -2.22
SRGAP3-205ENST00000475560 CD52P31358 61 aa1.17□□□□□ -2.22
SRGAP3-205ENST00000475560 DEFB1P60022 68 aa1.17□□□□□ -2.22
SRGAP3-205ENST00000475560 DEFB108BQ8NET1 73 aa1.17□□□□□ -2.22
SRGAP3-205ENST00000475560 Q9Y3F1 56 aa1.17□□□□□ -2.22
SRGAP3-205ENST00000475560 H3BUX3 64 aa1.16□□□□□ -2.22
SRGAP3-205ENST00000475560 DNAH1Q9P2D7 4330 aa1.15□□□□□ -2.22
SRGAP3-205ENST00000475560 KRTAP19-3Q7Z4W3 81 aa1.15□□□□□ -2.23
SRGAP3-205ENST00000475560 HTN1P15515 57 aa1.14□□□□□ -2.23
SRGAP3-205ENST00000475560 PRLHP81277 87 aa1.14□□□□□ -2.23
SRGAP3-205ENST00000475560 LELP1Q5T871 98 aa1.14□□□□□ -2.23
SRGAP3-205ENST00000475560 TRRAPQ9Y4A5 3859 aa1.14□□□□□ -2.23
SRGAP3-205ENST00000475560 KRTAP4-1Q9BYQ7 146 aa1.13□□□□□ -2.23
SRGAP3-205ENST00000475560 ZNF469Q96JG9 3925 aaPredicted RBP1.12□□□□□ -2.23
SRGAP3-205ENST00000475560 KMT2DO14686 5537 aa1.12□□□□□ -2.23
SRGAP3-205ENST00000475560 NOP10Q9NPE3 64 aaKnown RBP1.12□□□□□ -2.23
SRGAP3-205ENST00000475560 SRRM2Q9UQ35 2752 aaKnown RBP1.12□□□□□ -2.23
SRGAP3-205ENST00000475560 AHNAKQ09666 5890 aaKnown RBP1.11□□□□□ -2.23
SRGAP3-205ENST00000475560 SPINK1P00995 79 aa1.11□□□□□ -2.23
SRGAP3-205ENST00000475560 Q5VSD8 79 aa1.11□□□□□ -2.23
SRGAP3-205ENST00000475560 S4R3F8 94 aa1.11□□□□□ -2.23
SRGAP3-205ENST00000475560 HMCN1Q96RW7 5635 aa1.1□□□□□ -2.23
SRGAP3-205ENST00000475560 MUC5BQ9HC84 5762 aaPredicted RBP1.1□□□□□ -2.23
SRGAP3-205ENST00000475560 APLNQ9ULZ1 77 aa1.09□□□□□ -2.23
SRGAP3-205ENST00000475560 CMYA5Q8N3K9 4069 aa1.09□□□□□ -2.24
SRGAP3-205ENST00000475560 DEFB136Q30KP8 78 aa1.08□□□□□ -2.24
SRGAP3-205ENST00000475560 PKHD1P08F94 4074 aa1.07□□□□□ -2.24
SRGAP3-205ENST00000475560 DEFB133Q30KQ1 61 aa1.07□□□□□ -2.24
SRGAP3-205ENST00000475560 FRAS1Q86XX4 4008 aa1.06□□□□□ -2.24
SRGAP3-205ENST00000475560 KMT2AQ03164 3969 aa1.06□□□□□ -2.24
SRGAP3-205ENST00000475560 SPINK6Q6UWN8 80 aa1.06□□□□□ -2.24
SRGAP3-205ENST00000475560 USH2AO75445 5202 aa1.06□□□□□ -2.24
SRGAP3-205ENST00000475560 FAT3Q8TDW7 4589 aa1.05□□□□□ -2.24
SRGAP3-205ENST00000475560 FCGBPQ9Y6R7 5405 aaPredicted RBP1.05□□□□□ -2.24
SRGAP3-205ENST00000475560 KRTAP2-3P0C7H8 128 aa1.05□□□□□ -2.24
SRGAP3-205ENST00000475560 KRTAP2-4Q9BYR9 128 aa1.05□□□□□ -2.24
SRGAP3-205ENST00000475560 KRTAP2-1Q9BYU5 128 aa1.05□□□□□ -2.24
SRGAP3-205ENST00000475560 LRP2P98164 4655 aa1.03□□□□□ -2.24
SRGAP3-205ENST00000475560 H3BNG1 76 aa1.03□□□□□ -2.24
SRGAP3-205ENST00000475560 HECTD4Q9Y4D8 3996 aa1.02□□□□□ -2.25
SRGAP3-205ENST00000475560 MYCBP2O75592 4640 aa1.02□□□□□ -2.25
SRGAP3-205ENST00000475560 A0A096LPF7 62 aa1.02□□□□□ -2.25
SRGAP3-205ENST00000475560 M0QZ58 72 aa1.02□□□□□ -2.25
SRGAP3-205ENST00000475560 LINC01556Q5JQF7 62 aa1.02□□□□□ -2.25
SRGAP3-205ENST00000475560 HSPG2P98160 4391 aa1.01□□□□□ -2.25
SRGAP3-205ENST00000475560 A0A096LNI7 61 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms