RNA–Protein interactions for RNA: ENST00000475411.5

CBWD1-212, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 4,534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-212ENST00000475411 DNAH1Q9P2D7 4330 aa2.87□□□□□ -1.95
CBWD1-212ENST00000475411 HECTD4Q9Y4D8 3996 aa2.87□□□□□ -1.95
CBWD1-212ENST00000475411 LOC100996750A0A140TA64 210 aa2.86□□□□□ -1.95
CBWD1-212ENST00000475411 KRTAP4-6Q9BYQ5 205 aa2.86□□□□□ -1.95
CBWD1-212ENST00000475411 DNAH7Q8WXX0 4024 aa2.86□□□□□ -1.95
CBWD1-212ENST00000475411 DYNC2H1Q8NCM8 4307 aaKnown RBP2.85□□□□□ -1.95
CBWD1-212ENST00000475411 KMT2AQ03164 3969 aa2.84□□□□□ -1.95
CBWD1-212ENST00000475411 MEGF8Q7Z7M0 2845 aa2.83□□□□□ -1.96
CBWD1-212ENST00000475411 TNP1P09430 55 aa2.83□□□□□ -1.96
CBWD1-212ENST00000475411 KRTAP23-1A1A580 65 aa2.82□□□□□ -1.96
CBWD1-212ENST00000475411 HUWE1Q7Z6Z7 4374 aaKnown RBP2.81□□□□□ -1.96
CBWD1-212ENST00000475411 PKHD1L1Q86WI1 4243 aa2.79□□□□□ -1.96
CBWD1-212ENST00000475411 DNHD1Q96M86 4753 aa2.78□□□□□ -1.96
CBWD1-212ENST00000475411 FRAS1Q86XX4 4008 aa2.78□□□□□ -1.97
CBWD1-212ENST00000475411 DNAH9Q9NYC9 4486 aa2.77□□□□□ -1.97
CBWD1-212ENST00000475411 COL7A1Q02388 2944 aa2.77□□□□□ -1.97
CBWD1-212ENST00000475411 INE1O15225 51 aa2.76□□□□□ -1.97
CBWD1-212ENST00000475411 DNAH11Q96DT5 4516 aa2.75□□□□□ -1.97
CBWD1-212ENST00000475411 KRTAP15-1Q3LI76 137 aa2.75□□□□□ -1.97
CBWD1-212ENST00000475411 KRTAP9-6A0A140TA67 174 aa2.71□□□□□ -1.98
CBWD1-212ENST00000475411 VPS13DQ5THJ4 4388 aa2.71□□□□□ -1.98
CBWD1-212ENST00000475411 DNAH10Q8IVF4 4471 aa2.7□□□□□ -1.98
CBWD1-212ENST00000475411 KRTAP17-1Q9BYP8 105 aa2.7□□□□□ -1.98
CBWD1-212ENST00000475411 PKHD1P08F94 4074 aa2.69□□□□□ -1.98
CBWD1-212ENST00000475411 KRTAP9-2Q9BYQ4 174 aa2.67□□□□□ -1.98
CBWD1-212ENST00000475411 SRRM2Q9UQ35 2752 aaKnown RBP2.67□□□□□ -1.98
CBWD1-212ENST00000475411 PLECQ15149 4684 aaKnown RBP2.67□□□□□ -1.98
CBWD1-212ENST00000475411 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.65□□□□□ -1.98
CBWD1-212ENST00000475411 KRTAP4-8Q9BYQ9 185 aa2.65□□□□□ -1.98
CBWD1-212ENST00000475411 BIRC6Q9NR09 4857 aa2.65□□□□□ -1.99
CBWD1-212ENST00000475411 FAT3Q8TDW7 4589 aa2.64□□□□□ -1.99
CBWD1-212ENST00000475411 DNAH5Q8TE73 4624 aa2.62□□□□□ -1.99
CBWD1-212ENST00000475411 DYNC1H1Q14204 4646 aaKnown RBP2.61□□□□□ -1.99
CBWD1-212ENST00000475411 KRTAP12-2P59991 146 aa2.61□□□□□ -1.99
CBWD1-212ENST00000475411 KRTAP13-4Q3LI77 160 aa2.6□□□□□ -1.99
CBWD1-212ENST00000475411 PKD1P98161 4303 aa2.59□□□□□ -2
CBWD1-212ENST00000475411 KRTAP12-1P59990 96 aa2.58□□□□□ -2
CBWD1-212ENST00000475411 FAT2Q9NYQ8 4349 aa2.58□□□□□ -2
CBWD1-212ENST00000475411 DNAH17Q9UFH2 4485 aa2.56□□□□□ -2
CBWD1-212ENST00000475411 KRTAP3-1Q9BYR8 98 aa2.55□□□□□ -2
CBWD1-212ENST00000475411 MT1HP80294 61 aa2.55□□□□□ -2
CBWD1-212ENST00000475411 KRTAP19-4Q3LI73 84 aa2.54□□□□□ -2
CBWD1-212ENST00000475411 KRTAP10-6P60371 365 aaPredicted RBP2.54□□□□□ -2
CBWD1-212ENST00000475411 LRP1BQ9NZR2 4599 aa2.54□□□□□ -2
CBWD1-212ENST00000475411 VPS13BQ7Z7G8 4022 aa2.54□□□□□ -2
CBWD1-212ENST00000475411 RYR1P21817 5038 aa2.53□□□□□ -2
CBWD1-212ENST00000475411 RYR2Q92736 4967 aa2.53□□□□□ -2
CBWD1-212ENST00000475411 STARD9Q9P2P6 4700 aa2.53□□□□□ -2
CBWD1-212ENST00000475411 LCE1DQ5T752 114 aa2.52□□□□□ -2.01
CBWD1-212ENST00000475411 DNAH2Q9P225 4427 aa2.52□□□□□ -2.01
CBWD1-212ENST00000475411 HSPG2P98160 4391 aa2.51□□□□□ -2.01
CBWD1-212ENST00000475411 KRTAP9-9Q9BYP9 154 aa2.5□□□□□ -2.01
CBWD1-212ENST00000475411 KRTAP9-4Q9BYQ2 154 aa2.5□□□□□ -2.01
CBWD1-212ENST00000475411 KRTAP4-8A0A0G2JLE6 195 aa2.5□□□□□ -2.01
CBWD1-212ENST00000475411 MYCBP2O75592 4640 aa2.49□□□□□ -2.01
CBWD1-212ENST00000475411 KRTAP4-1Q9BYQ7 146 aa2.49□□□□□ -2.01
CBWD1-212ENST00000475411 RYR3Q15413 4870 aa2.48□□□□□ -2.01
CBWD1-212ENST00000475411 KIAA1109Q2LD37 5005 aa2.48□□□□□ -2.01
CBWD1-212ENST00000475411 KRTAP19-1Q8IUB9 90 aa2.48□□□□□ -2.01
CBWD1-212ENST00000475411 LCE4AQ5TA78 99 aa2.47□□□□□ -2.01
CBWD1-212ENST00000475411 DNAH8Q96JB1 4490 aa2.46□□□□□ -2.02
CBWD1-212ENST00000475411 HERC1Q15751 4861 aa2.46□□□□□ -2.02
CBWD1-212ENST00000475411 MT2AP02795 61 aa2.45□□□□□ -2.02
CBWD1-212ENST00000475411 HYDINQ4G0P3 5121 aa2.44□□□□□ -2.02
CBWD1-212ENST00000475411 KRTAP4-12Q9BQ66 201 aa2.44□□□□□ -2.02
CBWD1-212ENST00000475411 SACSQ9NZJ4 4579 aa2.44□□□□□ -2.02
CBWD1-212ENST00000475411 KRTAP10-12P60413 245 aa2.43□□□□□ -2.02
CBWD1-212ENST00000475411 HERC2O95714 4834 aa2.43□□□□□ -2.02
CBWD1-212ENST00000475411 PCLOQ9Y6V0 5065 aa2.42□□□□□ -2.02
CBWD1-212ENST00000475411 KRTAP8-1Q8IUC2 63 aa2.41□□□□□ -2.02
CBWD1-212ENST00000475411 FAT1Q14517 4588 aa2.39□□□□□ -2.03
CBWD1-212ENST00000475411 KRTAP4-7Q9BYR0 210 aa2.39□□□□□ -2.03
CBWD1-212ENST00000475411 MT1FP04733 61 aa2.38□□□□□ -2.03
CBWD1-212ENST00000475411 SPRR2GQ9BYE4 73 aa2.37□□□□□ -2.03
CBWD1-212ENST00000475411 APOBP04114 4563 aaKnown RBP2.37□□□□□ -2.03
CBWD1-212ENST00000475411 KMT2CQ8NEZ4 4911 aaKnown RBP2.36□□□□□ -2.03
CBWD1-212ENST00000475411 CRCT1Q9UGL9 99 aa2.34□□□□□ -2.03
CBWD1-212ENST00000475411 KRTAP4-9Q9BYQ8 210 aa2.31□□□□□ -2.04
CBWD1-212ENST00000475411 KRTAP19-8Q3LI54 63 aa2.29□□□□□ -2.04
CBWD1-212ENST00000475411 KRTAP9-7A8MTY7 169 aa2.28□□□□□ -2.04
CBWD1-212ENST00000475411 SPRR2FQ96RM1 72 aa2.28□□□□□ -2.04
CBWD1-212ENST00000475411 KRTAP12-3P60328 96 aa2.28□□□□□ -2.04
CBWD1-212ENST00000475411 EPPK1P58107 5090 aaKnown RBP2.27□□□□□ -2.05
CBWD1-212ENST00000475411 KRTAP4-11Q9BYQ6 195 aa2.27□□□□□ -2.05
CBWD1-212ENST00000475411 ABCA13Q86UQ4 5058 aa2.26□□□□□ -2.05
CBWD1-212ENST00000475411 KRTAP9-8Q9BYQ0 159 aa2.25□□□□□ -2.05
CBWD1-212ENST00000475411 KRTAP10-5P60370 271 aa2.25□□□□□ -2.05
CBWD1-212ENST00000475411 LCE5AQ5TCM9 118 aa2.25□□□□□ -2.05
CBWD1-212ENST00000475411 KRTAP4-2Q9BYR5 136 aa2.23□□□□□ -2.05
CBWD1-212ENST00000475411 SPRR2EP22531 72 aa2.22□□□□□ -2.05
CBWD1-212ENST00000475411 SPRR2BP35325 72 aa2.22□□□□□ -2.05
CBWD1-212ENST00000475411 SPRR2AP35326 72 aa2.22□□□□□ -2.05
CBWD1-212ENST00000475411 KRTAP9-3Q9BYQ3 159 aa2.22□□□□□ -2.05
CBWD1-212ENST00000475411 LCE3AQ5TA76 89 aa2.22□□□□□ -2.05
CBWD1-212ENST00000475411 LRP1Q07954 4544 aaKnown RBP2.21□□□□□ -2.06
CBWD1-212ENST00000475411 KRTAP10-7P60409 375 aaPredicted RBP2.19□□□□□ -2.06
CBWD1-212ENST00000475411 KRTAP19-2Q3LHN2 52 aa2.18□□□□□ -2.06
CBWD1-212ENST00000475411 SPRR2DP22532 72 aa2.17□□□□□ -2.06
CBWD1-212ENST00000475411 OBSCNQ5VST9 7968 aa2.17□□□□□ -2.06
CBWD1-212ENST00000475411 KRTAP19-6Q3LI70 58 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms