RNA–Protein interactions for RNA: ENST00000475323.5

ARHGEF39-203, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 2

Gene ARHGEF39, Length 2,862 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-203ENST00000475323 KRTAP10-4P60372 401 aaPredicted RBP7.09□□□□□ -1.27
ARHGEF39-203ENST00000475323 LRP1Q07954 4544 aaKnown RBP7.08□□□□□ -1.28
ARHGEF39-203ENST00000475323 HSPG2P98160 4391 aa7.08□□□□□ -1.28
ARHGEF39-203ENST00000475323 SPINT4Q6UDR6 99 aa7.06□□□□□ -1.28
ARHGEF39-203ENST00000475323 MYCBP2O75592 4640 aa7.05□□□□□ -1.28
ARHGEF39-203ENST00000475323 RYR2Q92736 4967 aa7.04□□□□□ -1.28
ARHGEF39-203ENST00000475323 A0A1B0GVY2 172 aa7.04□□□□□ -1.28
ARHGEF39-203ENST00000475323 FAT3Q8TDW7 4589 aa7.04□□□□□ -1.28
ARHGEF39-203ENST00000475323 KRTAP13-4Q3LI77 160 aa7□□□□□ -1.29
ARHGEF39-203ENST00000475323 A0A0D9SG42 100 aa6.99□□□□□ -1.29
ARHGEF39-203ENST00000475323 K7ERS5 55 aa6.99□□□□□ -1.29
ARHGEF39-203ENST00000475323 KRTAP10-6P60371 365 aaPredicted RBP6.99□□□□□ -1.29
ARHGEF39-203ENST00000475323 KRTAP3-3Q9BYR6 98 aa6.99□□□□□ -1.29
ARHGEF39-203ENST00000475323 TNXBP22105 4242 aa6.96□□□□□ -1.3
ARHGEF39-203ENST00000475323 KRTAP10-8P60410 259 aa6.94□□□□□ -1.3
ARHGEF39-203ENST00000475323 KRTAP3-2Q9BYR7 98 aa6.92□□□□□ -1.3
ARHGEF39-203ENST00000475323 RPL37P61927 97 aaKnown RBP6.91□□□□□ -1.3
ARHGEF39-203ENST00000475323 LUZP6Q538Z0 58 aa6.87□□□□□ -1.31
ARHGEF39-203ENST00000475323 KRTAP15-1Q3LI76 137 aa6.86□□□□□ -1.31
ARHGEF39-203ENST00000475323 LPAP08519 4548 aa6.86□□□□□ -1.31
ARHGEF39-203ENST00000475323 RYR3Q15413 4870 aa6.85□□□□□ -1.31
ARHGEF39-203ENST00000475323 TPRXLQ17RH7 258 aa6.85□□□□□ -1.31
ARHGEF39-203ENST00000475323 C10orf95Q9H7T3 257 aa6.84□□□□□ -1.31
ARHGEF39-203ENST00000475323 S4R3F8 94 aa6.84□□□□□ -1.31
ARHGEF39-203ENST00000475323 XP32Q5T750 250 aa6.82□□□□□ -1.32
ARHGEF39-203ENST00000475323 KRTAP12-2P59991 146 aa6.77□□□□□ -1.33
ARHGEF39-203ENST00000475323 Q5VSD8 79 aa6.76□□□□□ -1.33
ARHGEF39-203ENST00000475323 LRP2P98164 4655 aa6.74□□□□□ -1.33
ARHGEF39-203ENST00000475323 RYR1P21817 5038 aa6.71□□□□□ -1.34
ARHGEF39-203ENST00000475323 KIAA1109Q2LD37 5005 aa6.7□□□□□ -1.34
ARHGEF39-203ENST00000475323 KRTAP17-1Q9BYP8 105 aa6.7□□□□□ -1.34
ARHGEF39-203ENST00000475323 KRTAP12-1P59990 96 aa6.67□□□□□ -1.34
ARHGEF39-203ENST00000475323 EPPK1P58107 5090 aaKnown RBP6.62□□□□□ -1.35
ARHGEF39-203ENST00000475323 SEC61BP60468 96 aaKnown RBP6.58□□□□□ -1.36
ARHGEF39-203ENST00000475323 MT1HL1P0DM35 61 aa6.57□□□□□ -1.36
ARHGEF39-203ENST00000475323 ABCA13Q86UQ4 5058 aa6.52□□□□□ -1.36
ARHGEF39-203ENST00000475323 M0QZ58 72 aa6.49□□□□□ -1.37
ARHGEF39-203ENST00000475323 KRTAP4-5Q9BYR2 181 aa6.42□□□□□ -1.38
ARHGEF39-203ENST00000475323 LCE2DQ5TA82 110 aaPredicted RBP6.39□□□□□ -1.39
ARHGEF39-203ENST00000475323 LORP23490 312 aaPredicted RBP6.39□□□□□ -1.39
ARHGEF39-203ENST00000475323 R4GN34 69 aa6.39□□□□□ -1.39
ARHGEF39-203ENST00000475323 MUC17Q685J3 4493 aa6.34□□□□□ -1.39
ARHGEF39-203ENST00000475323 KRTAP4-1Q9BYQ7 146 aa6.25□□□□□ -1.41
ARHGEF39-203ENST00000475323 HERC2O95714 4834 aa6.24□□□□□ -1.41
ARHGEF39-203ENST00000475323 MUC2Q02817 5179 aa6.21□□□□□ -1.42
ARHGEF39-203ENST00000475323 PLAC4Q8WY50 150 aa6.21□□□□□ -1.42
ARHGEF39-203ENST00000475323 J3QL48 77 aa6.2□□□□□ -1.42
ARHGEF39-203ENST00000475323 KRTAP19-2Q3LHN2 52 aa6.1□□□□□ -1.43
ARHGEF39-203ENST00000475323 BIRC6Q9NR09 4857 aa6.1□□□□□ -1.43
ARHGEF39-203ENST00000475323 CAMK2N1Q7Z7J9 78 aa6.09□□□□□ -1.43
ARHGEF39-203ENST00000475323 HERC1Q15751 4861 aa5.98□□□□□ -1.45
ARHGEF39-203ENST00000475323 FLGP20930 4061 aaPredicted RBP5.98□□□□□ -1.45
ARHGEF39-203ENST00000475323 PCLOQ9Y6V0 5065 aa5.97□□□□□ -1.45
ARHGEF39-203ENST00000475323 PP632Q6XCG6 107 aa5.96□□□□□ -1.46
ARHGEF39-203ENST00000475323 FAT4Q6V0I7 4981 aa5.89□□□□□ -1.47
ARHGEF39-203ENST00000475323 PRO2289Q9P1D8 64 aa5.87□□□□□ -1.47
ARHGEF39-203ENST00000475323 HMCN2Q8NDA2 5059 aa5.84□□□□□ -1.47
ARHGEF39-203ENST00000475323 TNP1P09430 55 aa5.84□□□□□ -1.48
ARHGEF39-203ENST00000475323 SPRR5A0A1B0GTR4 108 aa5.69□□□□□ -1.5
ARHGEF39-203ENST00000475323 KRTAP23-1A1A580 65 aa5.67□□□□□ -1.5
ARHGEF39-203ENST00000475323 LCE2CQ5TA81 110 aa5.66□□□□□ -1.5
ARHGEF39-203ENST00000475323 RNF213Q63HN8 5207 aa5.66□□□□□ -1.5
ARHGEF39-203ENST00000475323 UBR4Q5T4S7 5183 aa5.66□□□□□ -1.5
ARHGEF39-203ENST00000475323 KRTAP19-1Q8IUB9 90 aa5.65□□□□□ -1.5
ARHGEF39-203ENST00000475323 SPRR2GQ9BYE4 73 aa5.61□□□□□ -1.51
ARHGEF39-203ENST00000475323 LCE3AQ5TA76 89 aa5.59□□□□□ -1.51
ARHGEF39-203ENST00000475323 M0R2T5 61 aa5.57□□□□□ -1.52
ARHGEF39-203ENST00000475323 INE1O15225 51 aa5.55□□□□□ -1.52
ARHGEF39-203ENST00000475323 MT1FP04733 61 aa5.49□□□□□ -1.53
ARHGEF39-203ENST00000475323 MT1HP80294 61 aa5.48□□□□□ -1.53
ARHGEF39-203ENST00000475323 KRTAP10-10P60014 251 aa5.48□□□□□ -1.53
ARHGEF39-203ENST00000475323 MT2AP02795 61 aa5.45□□□□□ -1.54
ARHGEF39-203ENST00000475323 KRTAP9-8Q9BYQ0 159 aa5.39□□□□□ -1.55
ARHGEF39-203ENST00000475323 KRTAP8-1Q8IUC2 63 aa5.36□□□□□ -1.55
ARHGEF39-203ENST00000475323 KRTAP10-5P60370 271 aa5.34□□□□□ -1.55
ARHGEF39-203ENST00000475323 MT1XP80297 61 aa5.34□□□□□ -1.56
ARHGEF39-203ENST00000475323 MT1BP07438 61 aa5.33□□□□□ -1.56
ARHGEF39-203ENST00000475323 KRTAP19-8Q3LI54 63 aa5.32□□□□□ -1.56
ARHGEF39-203ENST00000475323 KRTAP12-3P60328 96 aa5.28□□□□□ -1.56
ARHGEF39-203ENST00000475323 KRTAP10-12P60413 245 aa5.26□□□□□ -1.57
ARHGEF39-203ENST00000475323 KRTAP10-7P60409 375 aaPredicted RBP5.25□□□□□ -1.57
ARHGEF39-203ENST00000475323 LCE2BO14633 110 aa5.18□□□□□ -1.58
ARHGEF39-203ENST00000475323 KMT2DO14686 5537 aa5.16□□□□□ -1.58
ARHGEF39-203ENST00000475323 KRTAP9-3Q9BYQ3 159 aa5.14□□□□□ -1.59
ARHGEF39-203ENST00000475323 USH2AO75445 5202 aa5.13□□□□□ -1.59
ARHGEF39-203ENST00000475323 KRTAP19-5Q3LI72 72 aa5.04□□□□□ -1.6
ARHGEF39-203ENST00000475323 LCE3CQ5T5A8 94 aa4.97□□□□□ -1.61
ARHGEF39-203ENST00000475323 LCE2AQ5TA79 106 aaPredicted RBP4.97□□□□□ -1.61
ARHGEF39-203ENST00000475323 KRTAP4-8A0A0G2JLE6 195 aa4.94□□□□□ -1.62
ARHGEF39-203ENST00000475323 KRTAP4-8Q9BYQ9 185 aa4.94□□□□□ -1.62
ARHGEF39-203ENST00000475323 KRTAP9-6A8MVA2 160 aa4.9□□□□□ -1.62
ARHGEF39-203ENST00000475323 KRTAP4-7Q9BYR0 210 aa4.84□□□□□ -1.63
ARHGEF39-203ENST00000475323 LOC100996750A0A140TA64 210 aa4.83□□□□□ -1.64
ARHGEF39-203ENST00000475323 KRTAP4-6Q9BYQ5 205 aa4.83□□□□□ -1.64
ARHGEF39-203ENST00000475323 KRTAP19-7Q3SYF9 63 aa4.75□□□□□ -1.65
ARHGEF39-203ENST00000475323 KRTAP2-3P0C7H8 128 aa4.68□□□□□ -1.66
ARHGEF39-203ENST00000475323 KRTAP2-4Q9BYR9 128 aa4.68□□□□□ -1.66
ARHGEF39-203ENST00000475323 KRTAP2-1Q9BYU5 128 aa4.68□□□□□ -1.66
ARHGEF39-203ENST00000475323 FSIP2Q5CZC0 6907 aa4.68□□□□□ -1.66
ARHGEF39-203ENST00000475323 SSPOA2VEC9 5147 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms