RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 ITPR1Q14643 2758 aa0.14□□□□□ -2.39
HDAC9-222ENST00000474742 WDR87Q6ZQQ6 2873 aa0.14□□□□□ -2.39
HDAC9-222ENST00000474742 CFAP46Q8IYW2 2715 aa0.14□□□□□ -2.39
HDAC9-222ENST00000474742 DEFB108AA8MXU0 73 aa0.14□□□□□ -2.39
HDAC9-222ENST00000474742 SPRR2AP35326 72 aa0.14□□□□□ -2.39
HDAC9-222ENST00000474742 RPL39P5Q59GN2 51 aa0.14□□□□□ -2.39
HDAC9-222ENST00000474742 BSNQ9UPA5 3926 aa0.14□□□□□ -2.39
HDAC9-222ENST00000474742 COL7A1Q02388 2944 aa0.14□□□□□ -2.39
HDAC9-222ENST00000474742 LRBAP50851 2863 aa0.14□□□□□ -2.39
HDAC9-222ENST00000474742 CHD7Q9P2D1 2997 aa0.14□□□□□ -2.39
HDAC9-222ENST00000474742 TLN1Q9Y490 2541 aaKnown RBP0.14□□□□□ -2.39
HDAC9-222ENST00000474742 PRKDCP78527 4128 aaKnown RBP0.14□□□□□ -2.39
HDAC9-222ENST00000474742 KMT2AQ03164 3969 aa0.13□□□□□ -2.39
HDAC9-222ENST00000474742 CRYBG3Q68DQ2 2970 aa0.13□□□□□ -2.39
HDAC9-222ENST00000474742 CEP295Q9C0D2 2601 aa0.13□□□□□ -2.39
HDAC9-222ENST00000474742 MAP1AP78559 2803 aaPredicted RBP0.13□□□□□ -2.39
HDAC9-222ENST00000474742 APELAP0DMC3 54 aa0.13□□□□□ -2.39
HDAC9-222ENST00000474742 RPS29P62273 56 aaKnown RBP0.13□□□□□ -2.39
HDAC9-222ENST00000474742 DEFB124Q8NES8 71 aa0.13□□□□□ -2.39
HDAC9-222ENST00000474742 SPRR2GQ9BYE4 73 aa0.13□□□□□ -2.39
HDAC9-222ENST00000474742 ITPR3Q14573 2671 aa0.13□□□□□ -2.39
HDAC9-222ENST00000474742 COL6A3P12111 3177 aa0.13□□□□□ -2.39
HDAC9-222ENST00000474742 AKAP9Q99996 3911 aa0.13□□□□□ -2.39
HDAC9-222ENST00000474742 CELSR1Q9NYQ6 3014 aa0.13□□□□□ -2.39
HDAC9-222ENST00000474742 CENPEQ02224 2701 aa0.13□□□□□ -2.39
HDAC9-222ENST00000474742 ITPR2Q14571 2701 aa0.13□□□□□ -2.39
HDAC9-222ENST00000474742 PCLOQ9Y6V0 5065 aa0.13□□□□□ -2.39
HDAC9-222ENST00000474742 SYNE1Q8NF91 8797 aaKnown RBP0.12□□□□□ -2.39
HDAC9-222ENST00000474742 PDZD2O15018 2839 aa0.12□□□□□ -2.39
HDAC9-222ENST00000474742 ADGRG4Q8IZF6 3080 aa0.12□□□□□ -2.39
HDAC9-222ENST00000474742 SPRR2EP22531 72 aa0.12□□□□□ -2.39
HDAC9-222ENST00000474742 LINC01556Q5JQF7 62 aa0.12□□□□□ -2.39
HDAC9-222ENST00000474742 FLGP20930 4061 aaPredicted RBP0.12□□□□□ -2.39
HDAC9-222ENST00000474742 TNXBP22105 4242 aa0.12□□□□□ -2.39
HDAC9-222ENST00000474742 LAMA1P25391 3075 aa0.12□□□□□ -2.39
HDAC9-222ENST00000474742 FAT2Q9NYQ8 4349 aa0.11□□□□□ -2.39
HDAC9-222ENST00000474742 RANBP2P49792 3224 aaKnown RBP0.11□□□□□ -2.39
HDAC9-222ENST00000474742 PRUNE2Q8WUY3 3088 aa0.11□□□□□ -2.39
HDAC9-222ENST00000474742 MYCBP2O75592 4640 aa0.11□□□□□ -2.39
HDAC9-222ENST00000474742 A0A096LPF7 62 aa0.11□□□□□ -2.39
HDAC9-222ENST00000474742 DEFB4AO15263 64 aa0.11□□□□□ -2.39
HDAC9-222ENST00000474742 MT1AP04731 61 aa0.11□□□□□ -2.39
HDAC9-222ENST00000474742 HTN3P15516 51 aa0.11□□□□□ -2.39
HDAC9-222ENST00000474742 KRTAP21-1Q3LI58 79 aa0.11□□□□□ -2.39
HDAC9-222ENST00000474742 KRTAP8-1Q8IUC2 63 aa0.11□□□□□ -2.39
HDAC9-222ENST00000474742 DEFB108BQ8NET1 73 aa0.11□□□□□ -2.39
HDAC9-222ENST00000474742 COX14Q96I36 57 aa0.11□□□□□ -2.39
HDAC9-222ENST00000474742 SPRR2FQ96RM1 72 aa0.11□□□□□ -2.39
HDAC9-222ENST00000474742 MGAQ8IWI9 3026 aa0.11□□□□□ -2.39
HDAC9-222ENST00000474742 DMXL2Q8TDJ6 3036 aa0.11□□□□□ -2.39
HDAC9-222ENST00000474742 SSPOA2VEC9 5147 aa0.11□□□□□ -2.39
HDAC9-222ENST00000474742 PKD1P98161 4303 aa0.11□□□□□ -2.39
HDAC9-222ENST00000474742 HECTD4Q9Y4D8 3996 aa0.11□□□□□ -2.39
HDAC9-222ENST00000474742 UBR4Q5T4S7 5183 aa0.11□□□□□ -2.39
HDAC9-222ENST00000474742 TRIOO75962 3097 aa0.11□□□□□ -2.39
HDAC9-222ENST00000474742 CELSR3Q9NYQ7 3312 aa0.11□□□□□ -2.39
HDAC9-222ENST00000474742 DNAH3Q8TD57 4116 aa0.11□□□□□ -2.39
HDAC9-222ENST00000474742 C5orf42Q9H799 3197 aa0.1□□□□□ -2.39
HDAC9-222ENST00000474742 NIPBLQ6KC79 2804 aaeCLIP0.1□□□□□ -2.39
HDAC9-222ENST00000474742 CFAP54Q96N23 3096 aa0.1□□□□□ -2.39
HDAC9-222ENST00000474742 KMT2CQ8NEZ4 4911 aaKnown RBP0.1□□□□□ -2.39
HDAC9-222ENST00000474742 LYSTQ99698 3801 aa0.1□□□□□ -2.39
HDAC9-222ENST00000474742 LPAP08519 4548 aa0.1□□□□□ -2.39
HDAC9-222ENST00000474742 FRYLO94915 3013 aa0.1□□□□□ -2.39
HDAC9-222ENST00000474742 PKHD1P08F94 4074 aa0.1□□□□□ -2.39
HDAC9-222ENST00000474742 PHGR1C9JFL3 82 aa0.1□□□□□ -2.39
HDAC9-222ENST00000474742 KRTAP6-2Q3LI66 62 aa0.1□□□□□ -2.39
HDAC9-222ENST00000474742 LAMA3Q16787 3333 aa0.1□□□□□ -2.39
HDAC9-222ENST00000474742 LRP1Q07954 4544 aaKnown RBP0.1□□□□□ -2.39
HDAC9-222ENST00000474742 VPS13BQ7Z7G8 4022 aa0.1□□□□□ -2.39
HDAC9-222ENST00000474742 MT1HP80294 61 aa0.09□□□□□ -2.4
HDAC9-222ENST00000474742 DNAH1Q9P2D7 4330 aa0.09□□□□□ -2.4
HDAC9-222ENST00000474742 DNAH9Q9NYC9 4486 aa0.09□□□□□ -2.4
HDAC9-222ENST00000474742 HSPG2P98160 4391 aa0.09□□□□□ -2.4
HDAC9-222ENST00000474742 LAMA2P24043 3122 aaKnown RBP0.09□□□□□ -2.4
HDAC9-222ENST00000474742 DYNC2H1Q8NCM8 4307 aaKnown RBP0.08□□□□□ -2.4
HDAC9-222ENST00000474742 DNAH6Q9C0G6 4158 aa0.08□□□□□ -2.4
HDAC9-222ENST00000474742 DNAH7Q8WXX0 4024 aa0.08□□□□□ -2.4
HDAC9-222ENST00000474742 ANK3Q12955 4377 aaKnown RBP0.08□□□□□ -2.4
HDAC9-222ENST00000474742 CUBNO60494 3623 aa0.08□□□□□ -2.4
HDAC9-222ENST00000474742 DNAH2Q9P225 4427 aa0.08□□□□□ -2.4
HDAC9-222ENST00000474742 NBPF19A0A087WUL8 3843 aa0.08□□□□□ -2.4
HDAC9-222ENST00000474742 SMR3BP02814 79 aaPredicted RBP0.08□□□□□ -2.4
HDAC9-222ENST00000474742 SRCAPQ6ZRS2 3230 aa0.08□□□□□ -2.4
HDAC9-222ENST00000474742 ATMQ13315 3056 aa0.08□□□□□ -2.4
HDAC9-222ENST00000474742 PKHD1L1Q86WI1 4243 aa0.08□□□□□ -2.4
HDAC9-222ENST00000474742 CMYA5Q8N3K9 4069 aa0.08□□□□□ -2.4
HDAC9-222ENST00000474742 FREM2Q5SZK8 3169 aa0.07□□□□□ -2.4
HDAC9-222ENST00000474742 EYSQ5T1H1 3165 aa0.07□□□□□ -2.4
HDAC9-222ENST00000474742 DNAH12Q6ZR08 3092 aa0.07□□□□□ -2.4
HDAC9-222ENST00000474742 DNAH11Q96DT5 4516 aa0.07□□□□□ -2.4
HDAC9-222ENST00000474742 EPPK1P58107 5090 aaKnown RBP0.07□□□□□ -2.4
HDAC9-222ENST00000474742 STATHP02808 62 aa0.07□□□□□ -2.4
HDAC9-222ENST00000474742 MT1EP04732 61 aa0.07□□□□□ -2.4
HDAC9-222ENST00000474742 MT1HL1P0DM35 61 aa0.07□□□□□ -2.4
HDAC9-222ENST00000474742 KRTAP19-8Q3LI54 63 aa0.07□□□□□ -2.4
HDAC9-222ENST00000474742 KRTAP19-7Q3SYF9 63 aa0.07□□□□□ -2.4
HDAC9-222ENST00000474742 MT1LQ93083 61 aa0.07□□□□□ -2.4
HDAC9-222ENST00000474742 LAMA5O15230 3695 aa0.07□□□□□ -2.4
HDAC9-222ENST00000474742 MUC3AQ02505 3323 aa0.07□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms