RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 PKIGQ9Y2B9 76 aa0.73□□□□□ -2.29
CCDC39-203ENST00000473854 SSPOA2VEC9 5147 aa0.73□□□□□ -2.29
CCDC39-203ENST00000473854 TRAV7A0A075B6U4 112 aa0.72□□□□□ -2.29
CCDC39-203ENST00000473854 HCG22E2RYF7 251 aa0.72□□□□□ -2.29
CCDC39-203ENST00000473854 H7BZZ5 65 aa0.72□□□□□ -2.29
CCDC39-203ENST00000473854 UQCRQO14949 82 aa0.72□□□□□ -2.29
CCDC39-203ENST00000473854 PDE6GP18545 87 aa0.72□□□□□ -2.29
CCDC39-203ENST00000473854 NREPQ16612 68 aa0.72□□□□□ -2.29
CCDC39-203ENST00000473854 HRCT1Q6UXD1 115 aa0.72□□□□□ -2.29
CCDC39-203ENST00000473854 WFDC13Q8IUB5 93 aa0.72□□□□□ -2.29
CCDC39-203ENST00000473854 SERP2Q8N6R1 65 aa0.72□□□□□ -2.29
CCDC39-203ENST00000473854 ZCCHC13Q8WW36 166 aaKnown RBP0.72□□□□□ -2.29
CCDC39-203ENST00000473854 SNURFQ9Y675 71 aa0.72□□□□□ -2.29
CCDC39-203ENST00000473854 A0A0U1RQV1 116 aa0.71□□□□□ -2.3
CCDC39-203ENST00000473854 FAM236DA0A1B0GTK5 79 aa0.71□□□□□ -2.3
CCDC39-203ENST00000473854 A0A1B0GW54 56 aa0.71□□□□□ -2.3
CCDC39-203ENST00000473854 A8MWP4 228 aa0.71□□□□□ -2.3
CCDC39-203ENST00000473854 SMR3BP02814 79 aaPredicted RBP0.71□□□□□ -2.3
CCDC39-203ENST00000473854 FAM236CP0DP71 79 aa0.71□□□□□ -2.3
CCDC39-203ENST00000473854 KLKP1Q107X0 134 aa0.71□□□□□ -2.3
CCDC39-203ENST00000473854 ASB16-AS1Q495Z4 193 aa0.71□□□□□ -2.3
CCDC39-203ENST00000473854 FAM229BQ4G0N7 80 aa0.71□□□□□ -2.3
CCDC39-203ENST00000473854 PRR15Q8IV56 129 aa0.71□□□□□ -2.3
CCDC39-203ENST00000473854 C20orf197Q8N268 126 aa0.71□□□□□ -2.3
CCDC39-203ENST00000473854 C8orf17Q9NRJ1 99 aa0.71□□□□□ -2.3
CCDC39-203ENST00000473854 ZNF706Q9Y5V0 76 aaPredicted RBP0.71□□□□□ -2.3
CCDC39-203ENST00000473854 KMT2DO14686 5537 aa0.7□□□□□ -2.3
CCDC39-203ENST00000473854 IGHV6-1A0A0B4J1U7 121 aa0.7□□□□□ -2.3
CCDC39-203ENST00000473854 TRAV22A0A0B4J277 110 aa0.7□□□□□ -2.3
CCDC39-203ENST00000473854 H0Y9P7 68 aa0.7□□□□□ -2.3
CCDC39-203ENST00000473854 TMEM258P61165 79 aa0.7□□□□□ -2.3
CCDC39-203ENST00000473854 CD164Q04900 197 aa0.7□□□□□ -2.3
CCDC39-203ENST00000473854 C1orf195Q5TG92 126 aa0.7□□□□□ -2.3
CCDC39-203ENST00000473854 SPINK6Q6UWN8 80 aa0.7□□□□□ -2.3
CCDC39-203ENST00000473854 LINC00336Q6ZUF6 198 aa0.7□□□□□ -2.3
CCDC39-203ENST00000473854 TMEM254Q8TBM7 123 aa0.7□□□□□ -2.3
CCDC39-203ENST00000473854 DPH3Q96FX2 82 aa0.7□□□□□ -2.3
CCDC39-203ENST00000473854 hDV103S1A0JD37 113 aa0.69□□□□□ -2.3
CCDC39-203ENST00000473854 J3KT08 172 aa0.69□□□□□ -2.3
CCDC39-203ENST00000473854 MT1HL1P0DM35 61 aa0.69□□□□□ -2.3
CCDC39-203ENST00000473854 Q5VSD8 79 aa0.69□□□□□ -2.3
CCDC39-203ENST00000473854 Q5XG85 94 aa0.69□□□□□ -2.3
CCDC39-203ENST00000473854 CASC2Q6XLA1 102 aa0.69□□□□□ -2.3
CCDC39-203ENST00000473854 FP248Q71RG6 208 aaPredicted RBP0.69□□□□□ -2.3
CCDC39-203ENST00000473854 SSBP3-AS1Q7Z2R9 100 aa0.69□□□□□ -2.3
CCDC39-203ENST00000473854 SMIM20Q8N5G0 67 aa0.69□□□□□ -2.3
CCDC39-203ENST00000473854 LINC00304Q8N9R0 145 aa0.69□□□□□ -2.3
CCDC39-203ENST00000473854 RETNLBQ9BQ08 111 aa0.69□□□□□ -2.3
CCDC39-203ENST00000473854 MRPL34Q9BQ48 92 aaKnown RBP0.69□□□□□ -2.3
CCDC39-203ENST00000473854 C9orf92A6NGG3 77 aa0.68□□□□□ -2.3
CCDC39-203ENST00000473854 A8MUU9 505 aa0.68□□□□□ -2.3
CCDC39-203ENST00000473854 C8orf87E5RJ46 101 aa0.68□□□□□ -2.3
CCDC39-203ENST00000473854 NDUFC1O43677 76 aa0.68□□□□□ -2.3
CCDC39-203ENST00000473854 RPS29P62273 56 aaKnown RBP0.68□□□□□ -2.3
CCDC39-203ENST00000473854 PCOTHQ58A44 107 aa0.68□□□□□ -2.3
CCDC39-203ENST00000473854 C1orf64Q8NEQ6 169 aa0.68□□□□□ -2.3
CCDC39-203ENST00000473854 LINC00208Q96KT6 92 aa0.68□□□□□ -2.3
CCDC39-203ENST00000473854 LIMD2Q9BT23 127 aa0.68□□□□□ -2.3
CCDC39-203ENST00000473854 CYP4F30PQ9H0H9 118 aa0.68□□□□□ -2.3
CCDC39-203ENST00000473854 SERP1Q9Y6X1 66 aa0.68□□□□□ -2.3
CCDC39-203ENST00000473854 H3BPC8 53 aa0.67□□□□□ -2.3
CCDC39-203ENST00000473854 NDUFS5O43920 106 aa0.67□□□□□ -2.3
CCDC39-203ENST00000473854 NDUFB1O75438 58 aa0.67□□□□□ -2.3
CCDC39-203ENST00000473854 SPINK1P00995 79 aa0.67□□□□□ -2.3
CCDC39-203ENST00000473854 MP68P56378 58 aa0.67□□□□□ -2.3
CCDC39-203ENST00000473854 ATP5EP56381 51 aaPredicted RBP0.67□□□□□ -2.3
CCDC39-203ENST00000473854 LINC00313P59037 77 aa0.67□□□□□ -2.3
CCDC39-203ENST00000473854 C4orf26Q17RF5 130 aa0.67□□□□□ -2.3
CCDC39-203ENST00000473854 COA5Q86WW8 74 aa0.67□□□□□ -2.3
CCDC39-203ENST00000473854 SPANXA2-OT1Q8N9U9 137 aa0.67□□□□□ -2.3
CCDC39-203ENST00000473854 C20orf166-AS1Q96NR2 134 aa0.67□□□□□ -2.3
CCDC39-203ENST00000473854 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
CCDC39-203ENST00000473854 MUC5BQ9HC84 5762 aaPredicted RBP0.66□□□□□ -2.3
CCDC39-203ENST00000473854 LOC101927531A0A1B0GV80 90 aa0.66□□□□□ -2.3
CCDC39-203ENST00000473854 HRES1P13985 223 aa0.66□□□□□ -2.3
CCDC39-203ENST00000473854 RPS28P62857 69 aaKnown RBP0.66□□□□□ -2.3
CCDC39-203ENST00000473854 SPAG11AQ6PDA7 123 aa0.66□□□□□ -2.3
CCDC39-203ENST00000473854 DMAC1Q96GE9 116 aa0.66□□□□□ -2.3
CCDC39-203ENST00000473854 TP53AIP1Q9HCN2 124 aa0.66□□□□□ -2.3
CCDC39-203ENST00000473854 MUC12Q9UKN1 5478 aa0.66□□□□□ -2.3
CCDC39-203ENST00000473854 AHNAKQ09666 5890 aaKnown RBP0.66□□□□□ -2.3
CCDC39-203ENST00000473854 SMIM26A0A096LP01 95 aa0.65□□□□□ -2.31
CCDC39-203ENST00000473854 RPL37P61927 97 aaKnown RBP0.65□□□□□ -2.31
CCDC39-203ENST00000473854 Q5VV11 94 aa0.65□□□□□ -2.31
CCDC39-203ENST00000473854 C7orf65Q6ZTY9 151 aa0.65□□□□□ -2.31
CCDC39-203ENST00000473854 A8MUN3 132 aa0.64□□□□□ -2.31
CCDC39-203ENST00000473854 PSPHP1O15172 72 aa0.64□□□□□ -2.31
CCDC39-203ENST00000473854 TPRXLQ17RH7 258 aa0.64□□□□□ -2.31
CCDC39-203ENST00000473854 Q1T7F1 81 aa0.64□□□□□ -2.31
CCDC39-203ENST00000473854 KRTAP19-2Q3LHN2 52 aa0.64□□□□□ -2.31
CCDC39-203ENST00000473854 MDN1Q9NU22 5596 aa0.64□□□□□ -2.31
CCDC39-203ENST00000473854 SPINK7P58062 85 aa0.63□□□□□ -2.31
CCDC39-203ENST00000473854 COX6B2Q6YFQ2 88 aa0.63□□□□□ -2.31
CCDC39-203ENST00000473854 PRR15LQ9BU68 103 aa0.63□□□□□ -2.31
CCDC39-203ENST00000473854 LINC01558Q9Y6Z2 57 aa0.63□□□□□ -2.31
CCDC39-203ENST00000473854 H0YAA0 97 aa0.62□□□□□ -2.31
CCDC39-203ENST00000473854 CHKB-CPT1BH3BT56 60 aa0.62□□□□□ -2.31
CCDC39-203ENST00000473854 ACYP2P14621 99 aa0.62□□□□□ -2.31
CCDC39-203ENST00000473854 LCA10Q71F78 164 aa0.62□□□□□ -2.31
CCDC39-203ENST00000473854 BRK1Q8WUW1 75 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms