RNA–Protein interactions for RNA: ENST00000473835.6

U2SURP-208, Transcript of U2 snRNP associated SURP domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene U2SURP, Length 7,276 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2SURP-208ENST00000473835 FAT3Q8TDW7 4589 aa2.46□□□□□ -2.02
U2SURP-208ENST00000473835 LRP1Q07954 4544 aaKnown RBP2.46□□□□□ -2.02
U2SURP-208ENST00000473835 RPS29P62273 56 aaKnown RBP2.46□□□□□ -2.02
U2SURP-208ENST00000473835 HSPG2P98160 4391 aa2.44□□□□□ -2.02
U2SURP-208ENST00000473835 A0A1B0GVY2 172 aa2.44□□□□□ -2.02
U2SURP-208ENST00000473835 C10orf95Q9H7T3 257 aa2.43□□□□□ -2.02
U2SURP-208ENST00000473835 FAT1Q14517 4588 aa2.43□□□□□ -2.02
U2SURP-208ENST00000473835 KIAA1109Q2LD37 5005 aa2.43□□□□□ -2.02
U2SURP-208ENST00000473835 FLG2Q5D862 2391 aaPredicted RBP2.42□□□□□ -2.02
U2SURP-208ENST00000473835 KRTAP10-4P60372 401 aaPredicted RBP2.42□□□□□ -2.02
U2SURP-208ENST00000473835 C9orf92A6NGG3 77 aa2.42□□□□□ -2.02
U2SURP-208ENST00000473835 RPL37P61927 97 aaKnown RBP2.41□□□□□ -2.02
U2SURP-208ENST00000473835 RYR3Q15413 4870 aa2.4□□□□□ -2.03
U2SURP-208ENST00000473835 KRTAP12-2P59991 146 aa2.4□□□□□ -2.03
U2SURP-208ENST00000473835 NDUFAF8A1L188 74 aa2.39□□□□□ -2.03
U2SURP-208ENST00000473835 K7ERS5 55 aa2.38□□□□□ -2.03
U2SURP-208ENST00000473835 KRTAP10-8P60410 259 aa2.38□□□□□ -2.03
U2SURP-208ENST00000473835 LPAP08519 4548 aa2.38□□□□□ -2.03
U2SURP-208ENST00000473835 BIRC6Q9NR09 4857 aa2.38□□□□□ -2.03
U2SURP-208ENST00000473835 XP32Q5T750 250 aa2.37□□□□□ -2.03
U2SURP-208ENST00000473835 A0A0D9SG42 100 aa2.37□□□□□ -2.03
U2SURP-208ENST00000473835 SPINT4Q6UDR6 99 aa2.37□□□□□ -2.03
U2SURP-208ENST00000473835 S4R3F8 94 aa2.36□□□□□ -2.03
U2SURP-208ENST00000473835 KRTAP12-1P59990 96 aa2.36□□□□□ -2.03
U2SURP-208ENST00000473835 HERC2O95714 4834 aa2.35□□□□□ -2.03
U2SURP-208ENST00000473835 KMT2CQ8NEZ4 4911 aaKnown RBP2.33□□□□□ -2.04
U2SURP-208ENST00000473835 KRTAP17-1Q9BYP8 105 aa2.32□□□□□ -2.04
U2SURP-208ENST00000473835 ABCA13Q86UQ4 5058 aa2.32□□□□□ -2.04
U2SURP-208ENST00000473835 SMR3BP02814 79 aaPredicted RBP2.29□□□□□ -2.04
U2SURP-208ENST00000473835 EPPK1P58107 5090 aaKnown RBP2.28□□□□□ -2.04
U2SURP-208ENST00000473835 PCLOQ9Y6V0 5065 aa2.28□□□□□ -2.04
U2SURP-208ENST00000473835 LRP2P98164 4655 aa2.25□□□□□ -2.05
U2SURP-208ENST00000473835 LCE2DQ5TA82 110 aaPredicted RBP2.25□□□□□ -2.05
U2SURP-208ENST00000473835 MT1HL1P0DM35 61 aa2.24□□□□□ -2.05
U2SURP-208ENST00000473835 M0QZ58 72 aa2.23□□□□□ -2.05
U2SURP-208ENST00000473835 HERC1Q15751 4861 aa2.23□□□□□ -2.05
U2SURP-208ENST00000473835 A0A0A0MQY5 61 aa2.22□□□□□ -2.05
U2SURP-208ENST00000473835 HMCN2Q8NDA2 5059 aa2.22□□□□□ -2.05
U2SURP-208ENST00000473835 MUC17Q685J3 4493 aa2.21□□□□□ -2.06
U2SURP-208ENST00000473835 PLAC4Q8WY50 150 aa2.21□□□□□ -2.06
U2SURP-208ENST00000473835 DMBT1Q9UGM3 2413 aaPredicted RBP2.21□□□□□ -2.06
U2SURP-208ENST00000473835 LORP23490 312 aaPredicted RBP2.2□□□□□ -2.06
U2SURP-208ENST00000473835 Q5VSD8 79 aa2.19□□□□□ -2.06
U2SURP-208ENST00000473835 LUZP6Q538Z0 58 aa2.16□□□□□ -2.06
U2SURP-208ENST00000473835 SPRR5A0A1B0GTR4 108 aa2.14□□□□□ -2.07
U2SURP-208ENST00000473835 KRTAP19-2Q3LHN2 52 aa2.12□□□□□ -2.07
U2SURP-208ENST00000473835 R4GN34 69 aa2.12□□□□□ -2.07
U2SURP-208ENST00000473835 RNF213Q63HN8 5207 aa2.11□□□□□ -2.07
U2SURP-208ENST00000473835 PP632Q6XCG6 107 aa2.1□□□□□ -2.07
U2SURP-208ENST00000473835 FLGP20930 4061 aaPredicted RBP2.09□□□□□ -2.07
U2SURP-208ENST00000473835 KRTAP4-1Q9BYQ7 146 aa2.09□□□□□ -2.08
U2SURP-208ENST00000473835 MUC2Q02817 5179 aa2.08□□□□□ -2.08
U2SURP-208ENST00000473835 UBR4Q5T4S7 5183 aa2.08□□□□□ -2.08
U2SURP-208ENST00000473835 KRTAP4-5Q9BYR2 181 aa2.05□□□□□ -2.08
U2SURP-208ENST00000473835 SEC61BP60468 96 aaKnown RBP2.05□□□□□ -2.08
U2SURP-208ENST00000473835 KRTAP23-1A1A580 65 aa2.04□□□□□ -2.08
U2SURP-208ENST00000473835 CAMK2N1Q7Z7J9 78 aa2□□□□□ -2.09
U2SURP-208ENST00000473835 FAT4Q6V0I7 4981 aa1.98□□□□□ -2.09
U2SURP-208ENST00000473835 TNP1P09430 55 aa1.97□□□□□ -2.09
U2SURP-208ENST00000473835 PRO2289Q9P1D8 64 aa1.96□□□□□ -2.1
U2SURP-208ENST00000473835 J3QL48 77 aa1.95□□□□□ -2.1
U2SURP-208ENST00000473835 LCE2CQ5TA81 110 aa1.94□□□□□ -2.1
U2SURP-208ENST00000473835 LCE2AQ5TA79 106 aaPredicted RBP1.93□□□□□ -2.1
U2SURP-208ENST00000473835 LCE3AQ5TA76 89 aa1.93□□□□□ -2.1
U2SURP-208ENST00000473835 KRTAP19-1Q8IUB9 90 aa1.92□□□□□ -2.1
U2SURP-208ENST00000473835 SPRR2GQ9BYE4 73 aa1.92□□□□□ -2.1
U2SURP-208ENST00000473835 INE1O15225 51 aa1.89□□□□□ -2.11
U2SURP-208ENST00000473835 KRTAP8-1Q8IUC2 63 aa1.89□□□□□ -2.11
U2SURP-208ENST00000473835 KRTAP10-12P60413 245 aa1.88□□□□□ -2.11
U2SURP-208ENST00000473835 KRTAP19-8Q3LI54 63 aa1.85□□□□□ -2.11
U2SURP-208ENST00000473835 KRTAP10-5P60370 271 aa1.84□□□□□ -2.11
U2SURP-208ENST00000473835 MT1HP80294 61 aa1.83□□□□□ -2.12
U2SURP-208ENST00000473835 MT1XP80297 61 aa1.83□□□□□ -2.12
U2SURP-208ENST00000473835 MT1FP04733 61 aa1.82□□□□□ -2.12
U2SURP-208ENST00000473835 MT2AP02795 61 aa1.81□□□□□ -2.12
U2SURP-208ENST00000473835 KRTAP9-8Q9BYQ0 159 aa1.81□□□□□ -2.12
U2SURP-208ENST00000473835 USH2AO75445 5202 aa1.81□□□□□ -2.12
U2SURP-208ENST00000473835 MT1BP07438 61 aa1.8□□□□□ -2.12
U2SURP-208ENST00000473835 KRTAP12-3P60328 96 aa1.8□□□□□ -2.12
U2SURP-208ENST00000473835 KRTAP10-7P60409 375 aaPredicted RBP1.78□□□□□ -2.12
U2SURP-208ENST00000473835 KRTAP10-10P60014 251 aa1.78□□□□□ -2.12
U2SURP-208ENST00000473835 SSPOA2VEC9 5147 aa1.77□□□□□ -2.13
U2SURP-208ENST00000473835 KRTAP9-3Q9BYQ3 159 aa1.76□□□□□ -2.13
U2SURP-208ENST00000473835 KRTAP9-6A8MVA2 160 aa1.76□□□□□ -2.13
U2SURP-208ENST00000473835 KMT2DO14686 5537 aa1.74□□□□□ -2.13
U2SURP-208ENST00000473835 LCE3CQ5T5A8 94 aa1.73□□□□□ -2.13
U2SURP-208ENST00000473835 KRTAP2-3P0C7H8 128 aa1.72□□□□□ -2.13
U2SURP-208ENST00000473835 KRTAP2-4Q9BYR9 128 aa1.72□□□□□ -2.13
U2SURP-208ENST00000473835 KRTAP2-1Q9BYU5 128 aa1.72□□□□□ -2.13
U2SURP-208ENST00000473835 KRTAP19-5Q3LI72 72 aa1.71□□□□□ -2.14
U2SURP-208ENST00000473835 KRTAP19-4Q3LI73 84 aa1.69□□□□□ -2.14
U2SURP-208ENST00000473835 M0R2T5 61 aa1.66□□□□□ -2.14
U2SURP-208ENST00000473835 LCE2BO14633 110 aa1.66□□□□□ -2.14
U2SURP-208ENST00000473835 KRTAP4-7Q9BYR0 210 aa1.65□□□□□ -2.14
U2SURP-208ENST00000473835 KRTAP9-9Q9BYP9 154 aa1.64□□□□□ -2.15
U2SURP-208ENST00000473835 KRTAP9-4Q9BYQ2 154 aa1.64□□□□□ -2.15
U2SURP-208ENST00000473835 KRTAP4-8A0A0G2JLE6 195 aa1.64□□□□□ -2.15
U2SURP-208ENST00000473835 KRTAP19-7Q3SYF9 63 aa1.64□□□□□ -2.15
U2SURP-208ENST00000473835 KRTAP4-8Q9BYQ9 185 aa1.64□□□□□ -2.15
U2SURP-208ENST00000473835 KRTAP19-6Q3LI70 58 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms