RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 SEC61BP60468 96 aaKnown RBP3.93□□□□□ -1.78
CKS1B-205ENST00000473344 ZNF706Q9Y5V0 76 aaPredicted RBP3.93□□□□□ -1.78
CKS1B-205ENST00000473344 DSCR10P59022 87 aa3.92□□□□□ -1.78
CKS1B-205ENST00000473344 COA5Q86WW8 74 aa3.92□□□□□ -1.78
CKS1B-205ENST00000473344 Q8N377 158 aa3.92□□□□□ -1.78
CKS1B-205ENST00000473344 A0A1W2PNM2 257 aa3.91□□□□□ -1.78
CKS1B-205ENST00000473344 SPINK1P00995 79 aa3.91□□□□□ -1.78
CKS1B-205ENST00000473344 KRTAP13-3Q3SY46 172 aa3.91□□□□□ -1.78
CKS1B-205ENST00000473344 CRCT1Q9UGL9 99 aa3.91□□□□□ -1.78
CKS1B-205ENST00000473344 K7EQZ3 153 aa3.9□□□□□ -1.79
CKS1B-205ENST00000473344 MOBPQ13875 183 aa3.9□□□□□ -1.79
CKS1B-205ENST00000473344 LINC01554Q52M75 96 aa3.9□□□□□ -1.79
CKS1B-205ENST00000473344 Q6ZRX8 168 aa3.9□□□□□ -1.79
CKS1B-205ENST00000473344 ST20-AS1Q8NBB2 130 aa3.9□□□□□ -1.79
CKS1B-205ENST00000473344 Q8NDZ9 215 aa3.9□□□□□ -1.79
CKS1B-205ENST00000473344 DEFB105AQ8NG35 78 aa3.89□□□□□ -1.79
CKS1B-205ENST00000473344 IGLV8-61A0A075B6I0 122 aa3.87□□□□□ -1.79
CKS1B-205ENST00000473344 A8MWP4 228 aa3.87□□□□□ -1.79
CKS1B-205ENST00000473344 KRTAP4-1Q9BYQ7 146 aa3.87□□□□□ -1.79
CKS1B-205ENST00000473344 IGLV9-49A0A0B4J1Y8 123 aa3.86□□□□□ -1.79
CKS1B-205ENST00000473344 SPRR1AP35321 89 aa3.86□□□□□ -1.79
CKS1B-205ENST00000473344 WFDC13Q8IUB5 93 aa3.86□□□□□ -1.79
CKS1B-205ENST00000473344 RPS29P62273 56 aaKnown RBP3.85□□□□□ -1.79
CKS1B-205ENST00000473344 LINC00313P59037 77 aa3.84□□□□□ -1.79
CKS1B-205ENST00000473344 LINC00483Q53H64 154 aa3.84□□□□□ -1.79
CKS1B-205ENST00000473344 SSBP3-AS1Q7Z2R9 100 aa3.84□□□□□ -1.79
CKS1B-205ENST00000473344 ACYP2P14621 99 aa3.82□□□□□ -1.8
CKS1B-205ENST00000473344 KRTAP4-16G5E9R7 235 aaPredicted RBP3.81□□□□□ -1.8
CKS1B-205ENST00000473344 A0A087WSZ3 146 aa3.8□□□□□ -1.8
CKS1B-205ENST00000473344 MT1HP80294 61 aa3.8□□□□□ -1.8
CKS1B-205ENST00000473344 IGFL1Q6UW32 110 aa3.8□□□□□ -1.8
CKS1B-205ENST00000473344 M0R2T5 61 aa3.79□□□□□ -1.8
CKS1B-205ENST00000473344 PCOTHQ58A44 107 aa3.79□□□□□ -1.8
CKS1B-205ENST00000473344 A8MU10 97 aa3.78□□□□□ -1.8
CKS1B-205ENST00000473344 UQCR11O14957 56 aa3.78□□□□□ -1.8
CKS1B-205ENST00000473344 SPRR1BP22528 89 aa3.78□□□□□ -1.8
CKS1B-205ENST00000473344 SPATA8Q6RVD6 105 aa3.78□□□□□ -1.8
CKS1B-205ENST00000473344 C9orf92A6NGG3 77 aa3.77□□□□□ -1.81
CKS1B-205ENST00000473344 SPINK7P58062 85 aa3.77□□□□□ -1.81
CKS1B-205ENST00000473344 A0A1B0GU69 56 aa3.76□□□□□ -1.81
CKS1B-205ENST00000473344 KRTAP19-2Q3LHN2 52 aa3.76□□□□□ -1.81
CKS1B-205ENST00000473344 LINC00472Q9H8W2 130 aa3.76□□□□□ -1.81
CKS1B-205ENST00000473344 MMP24-AS1A0A0U1RRL7 71 aa3.75□□□□□ -1.81
CKS1B-205ENST00000473344 HRES1P13985 223 aa3.75□□□□□ -1.81
CKS1B-205ENST00000473344 KRTAP10-6P60371 365 aaPredicted RBP3.75□□□□□ -1.81
CKS1B-205ENST00000473344 COX6B2Q6YFQ2 88 aa3.75□□□□□ -1.81
CKS1B-205ENST00000473344 MIR22HGQ0VDD5 57 aa3.74□□□□□ -1.81
CKS1B-205ENST00000473344 DEFB116Q30KQ4 102 aa3.73□□□□□ -1.81
CKS1B-205ENST00000473344 C8orf17Q9NRJ1 99 aa3.73□□□□□ -1.81
CKS1B-205ENST00000473344 MRPL34Q9BQ48 92 aaKnown RBP3.72□□□□□ -1.81
CKS1B-205ENST00000473344 NOTCH2NLQ7Z3S9 236 aa3.71□□□□□ -1.82
CKS1B-205ENST00000473344 A0A1B0GVX0 72 aa3.7□□□□□ -1.82
CKS1B-205ENST00000473344 RPL37P61927 97 aaKnown RBP3.69□□□□□ -1.82
CKS1B-205ENST00000473344 DMAC1Q96GE9 116 aa3.69□□□□□ -1.82
CKS1B-205ENST00000473344 PRAC1Q96KF2 57 aa3.69□□□□□ -1.82
CKS1B-205ENST00000473344 USH2AO75445 5202 aa3.69□□□□□ -1.82
CKS1B-205ENST00000473344 FLGP20930 4061 aaPredicted RBP3.69□□□□□ -1.82
CKS1B-205ENST00000473344 IGHV6-1A0A0B4J1U7 121 aa3.67□□□□□ -1.82
CKS1B-205ENST00000473344 K7ERS5 55 aa3.65□□□□□ -1.83
CKS1B-205ENST00000473344 CSAG1Q6PB30 78 aa3.65□□□□□ -1.83
CKS1B-205ENST00000473344 SSPOA2VEC9 5147 aa3.65□□□□□ -1.83
CKS1B-205ENST00000473344 MACF1Q9UPN3 7388 aaKnown RBP3.63□□□□□ -1.83
CKS1B-205ENST00000473344 LCE1AQ5T7P2 110 aa3.63□□□□□ -1.83
CKS1B-205ENST00000473344 A0A0G2JQZ4 141 aa3.62□□□□□ -1.83
CKS1B-205ENST00000473344 ROMO1P60602 79 aa3.61□□□□□ -1.83
CKS1B-205ENST00000473344 KRTAP25-1Q3LHN0 102 aa3.61□□□□□ -1.83
CKS1B-205ENST00000473344 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.6□□□□□ -1.83
CKS1B-205ENST00000473344 ADM2Q7Z4H4 148 aa3.6□□□□□ -1.83
CKS1B-205ENST00000473344 SYNE2Q8WXH0 6885 aaKnown RBP3.6□□□□□ -1.83
CKS1B-205ENST00000473344 Q96NJ1 140 aa3.59□□□□□ -1.83
CKS1B-205ENST00000473344 FCGBPQ9Y6R7 5405 aaPredicted RBP3.56□□□□□ -1.84
CKS1B-205ENST00000473344 IGKV2-30P06310 120 aa3.56□□□□□ -1.84
CKS1B-205ENST00000473344 KRTAP10-7P60409 375 aaPredicted RBP3.56□□□□□ -1.84
CKS1B-205ENST00000473344 Q5W150 140 aa3.53□□□□□ -1.84
CKS1B-205ENST00000473344 IGKV2D-30A0A075B6S6 120 aa3.52□□□□□ -1.85
CKS1B-205ENST00000473344 A8MUU9 505 aa3.52□□□□□ -1.85
CKS1B-205ENST00000473344 C20orf166-AS1Q96NR2 134 aa3.5□□□□□ -1.85
CKS1B-205ENST00000473344 MT2AP02795 61 aa3.49□□□□□ -1.85
CKS1B-205ENST00000473344 KRTAP10-10P60014 251 aa3.48□□□□□ -1.85
CKS1B-205ENST00000473344 KRTAP5-11Q6L8G4 156 aa3.48□□□□□ -1.85
CKS1B-205ENST00000473344 A0A1B0GU33 70 aa3.47□□□□□ -1.85
CKS1B-205ENST00000473344 MT1FP04733 61 aa3.46□□□□□ -1.86
CKS1B-205ENST00000473344 KRTAP16-1A8MUX0 517 aa3.44□□□□□ -1.86
CKS1B-205ENST00000473344 SPINT4Q6UDR6 99 aa3.44□□□□□ -1.86
CKS1B-205ENST00000473344 H1FX-AS1Q4G0G2 97 aa3.43□□□□□ -1.86
CKS1B-205ENST00000473344 KRTAP2-2Q9BYT5 123 aa3.41□□□□□ -1.86
CKS1B-205ENST00000473344 LCE1EQ5T753 118 aa3.4□□□□□ -1.87
CKS1B-205ENST00000473344 H0YAA0 97 aa3.39□□□□□ -1.87
CKS1B-205ENST00000473344 A0A0A0MQY5 61 aa3.38□□□□□ -1.87
CKS1B-205ENST00000473344 KRTAP19-6Q3LI70 58 aa3.38□□□□□ -1.87
CKS1B-205ENST00000473344 CRIPTQ9P021 101 aa3.37□□□□□ -1.87
CKS1B-205ENST00000473344 P0C880 135 aa3.35□□□□□ -1.87
CKS1B-205ENST00000473344 KRTAP6-3Q3LI67 103 aa3.34□□□□□ -1.87
CKS1B-205ENST00000473344 NEBP20929 6669 aa3.34□□□□□ -1.88
CKS1B-205ENST00000473344 MUC12Q9UKN1 5478 aa3.31□□□□□ -1.88
CKS1B-205ENST00000473344 NDUFAF8A1L188 74 aa3.3□□□□□ -1.88
CKS1B-205ENST00000473344 LUZP6Q538Z0 58 aa3.27□□□□□ -1.89
CKS1B-205ENST00000473344 MT3P25713 68 aa3.23□□□□□ -1.89
CKS1B-205ENST00000473344 KRTAP20-1Q3LI63 56 aa3.2□□□□□ -1.9
CKS1B-205ENST00000473344 MDN1Q9NU22 5596 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms