RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 A8MUU9 505 aa4.21□□□□□ -1.74
CCDC171-205ENST00000472806 C20orf166-AS1Q96NR2 134 aa4.21□□□□□ -1.74
CCDC171-205ENST00000472806 SACSQ9NZJ4 4579 aa4.21□□□□□ -1.74
CCDC171-205ENST00000472806 KRTAP2-2Q9BYT5 123 aa4.2□□□□□ -1.74
CCDC171-205ENST00000472806 A6NED7 52 aa4.19□□□□□ -1.74
CCDC171-205ENST00000472806 KRTAP10-6P60371 365 aaPredicted RBP4.19□□□□□ -1.74
CCDC171-205ENST00000472806 SPTSSBQ8NFR3 76 aa4.19□□□□□ -1.74
CCDC171-205ENST00000472806 DYNC1H1Q14204 4646 aaKnown RBP4.18□□□□□ -1.74
CCDC171-205ENST00000472806 Q5VSD8 79 aa4.17□□□□□ -1.74
CCDC171-205ENST00000472806 VPS13BQ7Z7G8 4022 aa4.17□□□□□ -1.74
CCDC171-205ENST00000472806 C9orf92A6NGG3 77 aa4.16□□□□□ -1.74
CCDC171-205ENST00000472806 A0A1B0GU69 56 aa4.15□□□□□ -1.75
CCDC171-205ENST00000472806 KRTAP10-8P60410 259 aa4.15□□□□□ -1.75
CCDC171-205ENST00000472806 CDC42SE1Q9NRR8 79 aa4.15□□□□□ -1.75
CCDC171-205ENST00000472806 ATP11AUNQ6ZP68 121 aa4.13□□□□□ -1.75
CCDC171-205ENST00000472806 SEC61GP60059 68 aa4.12□□□□□ -1.75
CCDC171-205ENST00000472806 APOBP04114 4563 aaKnown RBP4.12□□□□□ -1.75
CCDC171-205ENST00000472806 SPINK7P58062 85 aa4.1□□□□□ -1.75
CCDC171-205ENST00000472806 RYR2Q92736 4967 aa4.1□□□□□ -1.75
CCDC171-205ENST00000472806 PKHD1L1Q86WI1 4243 aa4.08□□□□□ -1.76
CCDC171-205ENST00000472806 UQCR11O14957 56 aa4.07□□□□□ -1.76
CCDC171-205ENST00000472806 PMAIP1Q13794 54 aa4.07□□□□□ -1.76
CCDC171-205ENST00000472806 LCA10Q71F78 164 aa4.07□□□□□ -1.76
CCDC171-205ENST00000472806 PKHD1P08F94 4074 aa4.06□□□□□ -1.76
CCDC171-205ENST00000472806 RPL37P61927 97 aaKnown RBP4.06□□□□□ -1.76
CCDC171-205ENST00000472806 COX6B2Q6YFQ2 88 aa4.06□□□□□ -1.76
CCDC171-205ENST00000472806 MIR22HGQ0VDD5 57 aa4.03□□□□□ -1.76
CCDC171-205ENST00000472806 SPATA8Q6RVD6 105 aa4.03□□□□□ -1.76
CCDC171-205ENST00000472806 FAT1Q14517 4588 aa4.03□□□□□ -1.76
CCDC171-205ENST00000472806 FLG2Q5D862 2391 aaPredicted RBP4.02□□□□□ -1.77
CCDC171-205ENST00000472806 A8MU10 97 aa4□□□□□ -1.77
CCDC171-205ENST00000472806 MT1HL1P0DM35 61 aa3.99□□□□□ -1.77
CCDC171-205ENST00000472806 A6NN06 94 aa3.98□□□□□ -1.77
CCDC171-205ENST00000472806 KTN1-AS1Q86SY8 53 aa3.98□□□□□ -1.77
CCDC171-205ENST00000472806 TPRXLQ17RH7 258 aa3.97□□□□□ -1.77
CCDC171-205ENST00000472806 FAT3Q8TDW7 4589 aa3.95□□□□□ -1.78
CCDC171-205ENST00000472806 KMT2CQ8NEZ4 4911 aaKnown RBP3.95□□□□□ -1.78
CCDC171-205ENST00000472806 A0A1B0GU33 70 aa3.94□□□□□ -1.78
CCDC171-205ENST00000472806 LCE1EQ5T753 118 aa3.94□□□□□ -1.78
CCDC171-205ENST00000472806 HSPG2P98160 4391 aa3.93□□□□□ -1.78
CCDC171-205ENST00000472806 RYR1P21817 5038 aa3.93□□□□□ -1.78
CCDC171-205ENST00000472806 H1FX-AS1Q4G0G2 97 aa3.93□□□□□ -1.78
CCDC171-205ENST00000472806 S4R3F8 94 aa3.93□□□□□ -1.78
CCDC171-205ENST00000472806 TNXBP22105 4242 aa3.92□□□□□ -1.78
CCDC171-205ENST00000472806 RBM12B-AS1Q9P1G2 102 aa3.92□□□□□ -1.78
CCDC171-205ENST00000472806 K7ERS5 55 aa3.89□□□□□ -1.79
CCDC171-205ENST00000472806 SEC61BP60468 96 aaKnown RBP3.87□□□□□ -1.79
CCDC171-205ENST00000472806 DMBT1Q9UGM3 2413 aaPredicted RBP3.85□□□□□ -1.79
CCDC171-205ENST00000472806 LRP1Q07954 4544 aaKnown RBP3.85□□□□□ -1.79
CCDC171-205ENST00000472806 H0YAA0 97 aa3.85□□□□□ -1.79
CCDC171-205ENST00000472806 RYR3Q15413 4870 aa3.85□□□□□ -1.79
CCDC171-205ENST00000472806 CSAG1Q6PB30 78 aa3.83□□□□□ -1.8
CCDC171-205ENST00000472806 KIAA1109Q2LD37 5005 aa3.79□□□□□ -1.8
CCDC171-205ENST00000472806 ADM2Q7Z4H4 148 aa3.75□□□□□ -1.81
CCDC171-205ENST00000472806 M0QZ58 72 aa3.74□□□□□ -1.81
CCDC171-205ENST00000472806 MYCBP2O75592 4640 aa3.72□□□□□ -1.81
CCDC171-205ENST00000472806 KRTAP5-1Q6L8H4 278 aa3.72□□□□□ -1.81
CCDC171-205ENST00000472806 PRAC1Q96KF2 57 aa3.72□□□□□ -1.81
CCDC171-205ENST00000472806 P0C880 135 aa3.71□□□□□ -1.82
CCDC171-205ENST00000472806 EPPK1P58107 5090 aaKnown RBP3.71□□□□□ -1.82
CCDC171-205ENST00000472806 A0A0D9SG42 100 aa3.69□□□□□ -1.82
CCDC171-205ENST00000472806 ROMO1P60602 79 aa3.69□□□□□ -1.82
CCDC171-205ENST00000472806 KRTAP13-4Q3LI77 160 aa3.69□□□□□ -1.82
CCDC171-205ENST00000472806 LINC01554Q52M75 96 aa3.66□□□□□ -1.82
CCDC171-205ENST00000472806 KRTAP25-1Q3LHN0 102 aa3.65□□□□□ -1.83
CCDC171-205ENST00000472806 R4GN34 69 aa3.64□□□□□ -1.83
CCDC171-205ENST00000472806 KRTAP10-5P60370 271 aa3.63□□□□□ -1.83
CCDC171-205ENST00000472806 SPINT4Q6UDR6 99 aa3.62□□□□□ -1.83
CCDC171-205ENST00000472806 LRP2P98164 4655 aa3.62□□□□□ -1.83
CCDC171-205ENST00000472806 KRTAP4-1Q9BYQ7 146 aa3.61□□□□□ -1.83
CCDC171-205ENST00000472806 MUC17Q685J3 4493 aa3.61□□□□□ -1.83
CCDC171-205ENST00000472806 BIRC6Q9NR09 4857 aa3.6□□□□□ -1.83
CCDC171-205ENST00000472806 KRTAP12-1P59990 96 aa3.6□□□□□ -1.83
CCDC171-205ENST00000472806 KRTAP4-4Q9BYR3 166 aa3.6□□□□□ -1.83
CCDC171-205ENST00000472806 KRTAP12-2P59991 146 aa3.59□□□□□ -1.83
CCDC171-205ENST00000472806 HERC2O95714 4834 aa3.59□□□□□ -1.83
CCDC171-205ENST00000472806 LPAP08519 4548 aa3.58□□□□□ -1.84
CCDC171-205ENST00000472806 CRIPTQ9P021 101 aa3.57□□□□□ -1.84
CCDC171-205ENST00000472806 KRTAP19-2Q3LHN2 52 aa3.56□□□□□ -1.84
CCDC171-205ENST00000472806 MT3P25713 68 aa3.55□□□□□ -1.84
CCDC171-205ENST00000472806 KRTAP5-4Q6L8H1 288 aa3.55□□□□□ -1.84
CCDC171-205ENST00000472806 ABCA13Q86UQ4 5058 aa3.55□□□□□ -1.84
CCDC171-205ENST00000472806 KRTAP9-6A8MVA2 160 aa3.54□□□□□ -1.84
CCDC171-205ENST00000472806 KRTAP5-9P26371 169 aa3.51□□□□□ -1.85
CCDC171-205ENST00000472806 LCE1FQ5T754 118 aa3.46□□□□□ -1.86
CCDC171-205ENST00000472806 KRTAP10-12P60413 245 aa3.45□□□□□ -1.86
CCDC171-205ENST00000472806 CAMK2N1Q7Z7J9 78 aa3.45□□□□□ -1.86
CCDC171-205ENST00000472806 C10orf95Q9H7T3 257 aa3.42□□□□□ -1.86
CCDC171-205ENST00000472806 M0R2T5 61 aa3.41□□□□□ -1.86
CCDC171-205ENST00000472806 HERC1Q15751 4861 aa3.41□□□□□ -1.86
CCDC171-205ENST00000472806 PP632Q6XCG6 107 aa3.39□□□□□ -1.87
CCDC171-205ENST00000472806 FLGP20930 4061 aaPredicted RBP3.37□□□□□ -1.87
CCDC171-205ENST00000472806 HMCN2Q8NDA2 5059 aa3.36□□□□□ -1.87
CCDC171-205ENST00000472806 PLAC4Q8WY50 150 aa3.36□□□□□ -1.87
CCDC171-205ENST00000472806 PCLOQ9Y6V0 5065 aa3.35□□□□□ -1.87
CCDC171-205ENST00000472806 MT1HP80294 61 aa3.35□□□□□ -1.87
CCDC171-205ENST00000472806 SPRR2GQ9BYE4 73 aa3.34□□□□□ -1.87
CCDC171-205ENST00000472806 TNP1P09430 55 aa3.33□□□□□ -1.88
CCDC171-205ENST00000472806 A0A0A0MQY5 61 aa3.32□□□□□ -1.88
CCDC171-205ENST00000472806 OBSCNQ5VST9 7968 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms