RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 NDUFB1O75438 58 aa4.14□□□□□ -1.75
VCL-204ENST00000472585 ATXN8Q156A1 80 aa4.14□□□□□ -1.75
VCL-204ENST00000472585 Q5W150 140 aa4.14□□□□□ -1.75
VCL-204ENST00000472585 DSCR8Q96T75 97 aa4.14□□□□□ -1.75
VCL-204ENST00000472585 MMP24-AS1A0A0U1RRL7 71 aa4.12□□□□□ -1.75
VCL-204ENST00000472585 J3QR89 54 aa4.12□□□□□ -1.75
VCL-204ENST00000472585 ETDBQ3ZM63 59 aa4.12□□□□□ -1.75
VCL-204ENST00000472585 PRR15Q8IV56 129 aa4.12□□□□□ -1.75
VCL-204ENST00000472585 C9JAW5 83 aa4.11□□□□□ -1.75
VCL-204ENST00000472585 C5orf47Q569G3 176 aa4.11□□□□□ -1.75
VCL-204ENST00000472585 BAALC-AS2P0C853 105 aa4.1□□□□□ -1.75
VCL-204ENST00000472585 MRPL34Q9BQ48 92 aaKnown RBP4.1□□□□□ -1.75
VCL-204ENST00000472585 H3BT86 120 aa4.09□□□□□ -1.75
VCL-204ENST00000472585 C4orf26Q17RF5 130 aa4.09□□□□□ -1.75
VCL-204ENST00000472585 TMEM254Q8TBM7 123 aa4.09□□□□□ -1.75
VCL-204ENST00000472585 SCGB1A1P11684 91 aa4.06□□□□□ -1.76
VCL-204ENST00000472585 SPRR2DP22532 72 aa4.06□□□□□ -1.76
VCL-204ENST00000472585 LOC110117498A0A087WWA1 95 aa4.04□□□□□ -1.76
VCL-204ENST00000472585 hDV103S1A0JD37 113 aa4.04□□□□□ -1.76
VCL-204ENST00000472585 K7EQZ3 153 aa4.04□□□□□ -1.76
VCL-204ENST00000472585 NDUFS5O43920 106 aa4.04□□□□□ -1.76
VCL-204ENST00000472585 C7orf65Q6ZTY9 151 aa4.04□□□□□ -1.76
VCL-204ENST00000472585 GPR98Q8WXG9 6306 aa4.04□□□□□ -1.76
VCL-204ENST00000472585 A0A0A0MQY5 61 aa4.02□□□□□ -1.77
VCL-204ENST00000472585 FAM240AA0A1B0GVK7 77 aa4.02□□□□□ -1.77
VCL-204ENST00000472585 A0A1B0GW54 56 aa4.02□□□□□ -1.77
VCL-204ENST00000472585 LCA10Q71F78 164 aa4.02□□□□□ -1.77
VCL-204ENST00000472585 KLKP1Q107X0 134 aa4.01□□□□□ -1.77
VCL-204ENST00000472585 KRTAP8-1Q8IUC2 63 aa4.01□□□□□ -1.77
VCL-204ENST00000472585 C14orf132Q9NPU4 83 aa4.01□□□□□ -1.77
VCL-204ENST00000472585 JMJD7-PLA2G4BH0Y9G9 81 aa4□□□□□ -1.77
VCL-204ENST00000472585 NREPQ16612 68 aa4□□□□□ -1.77
VCL-204ENST00000472585 CSAG1Q6PB30 78 aa4□□□□□ -1.77
VCL-204ENST00000472585 MT-ATP8P03928 68 aa3.99□□□□□ -1.77
VCL-204ENST00000472585 S4R3F8 94 aa3.99□□□□□ -1.77
VCL-204ENST00000472585 ACYP1P07311 99 aa3.97□□□□□ -1.77
VCL-204ENST00000472585 PDE6GP18545 87 aa3.96□□□□□ -1.78
VCL-204ENST00000472585 Q8N9L7 120 aa3.96□□□□□ -1.78
VCL-204ENST00000472585 HCG22E2RYF7 251 aa3.95□□□□□ -1.78
VCL-204ENST00000472585 C1orf64Q8NEQ6 169 aa3.95□□□□□ -1.78
VCL-204ENST00000472585 A0A087WVE0 104 aa3.94□□□□□ -1.78
VCL-204ENST00000472585 MT3P25713 68 aa3.94□□□□□ -1.78
VCL-204ENST00000472585 MT1XP80297 61 aa3.94□□□□□ -1.78
VCL-204ENST00000472585 PRO2289Q9P1D8 64 aa3.94□□□□□ -1.78
VCL-204ENST00000472585 CASC2Q6XLA1 102 aa3.92□□□□□ -1.78
VCL-204ENST00000472585 LINC00643Q86TS7 51 aa3.92□□□□□ -1.78
VCL-204ENST00000472585 CRIPTQ9P021 101 aa3.91□□□□□ -1.78
VCL-204ENST00000472585 BPY2O14599 106 aa3.9□□□□□ -1.79
VCL-204ENST00000472585 CXCL6P80162 114 aa3.89□□□□□ -1.79
VCL-204ENST00000472585 ANAPC13Q9BS18 74 aa3.87□□□□□ -1.79
VCL-204ENST00000472585 HIST1H4AP62805 103 aaKnown RBP3.85□□□□□ -1.79
VCL-204ENST00000472585 ATP5EP2Q5VTU8 51 aa3.85□□□□□ -1.79
VCL-204ENST00000472585 DSTQ03001 7570 aaKnown RBP3.85□□□□□ -1.79
VCL-204ENST00000472585 KRTAP12-2P59991 146 aa3.84□□□□□ -1.79
VCL-204ENST00000472585 UBL5Q9BZL1 73 aa3.84□□□□□ -1.79
VCL-204ENST00000472585 KRTAP10-7P60409 375 aaPredicted RBP3.82□□□□□ -1.8
VCL-204ENST00000472585 CCDC179H3BU77 68 aa3.8□□□□□ -1.8
VCL-204ENST00000472585 PLAC4Q8WY50 150 aa3.8□□□□□ -1.8
VCL-204ENST00000472585 ATOX1O00244 68 aa3.79□□□□□ -1.8
VCL-204ENST00000472585 H0YAA0 97 aa3.78□□□□□ -1.8
VCL-204ENST00000472585 CYP4F30PQ9H0H9 118 aa3.78□□□□□ -1.8
VCL-204ENST00000472585 UQCRQO14949 82 aa3.77□□□□□ -1.81
VCL-204ENST00000472585 COX7CP15954 63 aa3.77□□□□□ -1.81
VCL-204ENST00000472585 A8MUN3 132 aa3.76□□□□□ -1.81
VCL-204ENST00000472585 ADM2Q7Z4H4 148 aa3.75□□□□□ -1.81
VCL-204ENST00000472585 SERP2Q8N6R1 65 aa3.75□□□□□ -1.81
VCL-204ENST00000472585 KRTAP10-12P60413 245 aa3.72□□□□□ -1.81
VCL-204ENST00000472585 TP53AIP1Q9HCN2 124 aa3.72□□□□□ -1.81
VCL-204ENST00000472585 SMIM20Q8N5G0 67 aa3.71□□□□□ -1.82
VCL-204ENST00000472585 TRAV7A0A075B6U4 112 aa3.7□□□□□ -1.82
VCL-204ENST00000472585 NDUFC1O43677 76 aa3.7□□□□□ -1.82
VCL-204ENST00000472585 P0C880 135 aa3.68□□□□□ -1.82
VCL-204ENST00000472585 LCE1EQ5T753 118 aa3.68□□□□□ -1.82
VCL-204ENST00000472585 CYSTM1Q9H1C7 97 aa3.68□□□□□ -1.82
VCL-204ENST00000472585 TMEM258P61165 79 aa3.67□□□□□ -1.82
VCL-204ENST00000472585 OCR1Q9BZK8 76 aa3.65□□□□□ -1.83
VCL-204ENST00000472585 KRTAP5-11Q6L8G4 156 aa3.64□□□□□ -1.83
VCL-204ENST00000472585 HMCN1Q96RW7 5635 aa3.63□□□□□ -1.83
VCL-204ENST00000472585 LOC101927531A0A1B0GV80 90 aa3.63□□□□□ -1.83
VCL-204ENST00000472585 RPS28P62857 69 aaKnown RBP3.63□□□□□ -1.83
VCL-204ENST00000472585 C20orf197Q8N268 126 aa3.63□□□□□ -1.83
VCL-204ENST00000472585 R4GN34 69 aa3.63□□□□□ -1.83
VCL-204ENST00000472585 TRAV22A0A0B4J277 110 aa3.62□□□□□ -1.83
VCL-204ENST00000472585 H7BZZ5 65 aa3.62□□□□□ -1.83
VCL-204ENST00000472585 M0QZ58 72 aa3.61□□□□□ -1.83
VCL-204ENST00000472585 AHNAK2Q8IVF2 5795 aa3.6□□□□□ -1.83
VCL-204ENST00000472585 MT4P47944 62 aa3.58□□□□□ -1.84
VCL-204ENST00000472585 LINC01554Q52M75 96 aa3.58□□□□□ -1.84
VCL-204ENST00000472585 KRTAP5-10Q6L8G5 202 aa3.58□□□□□ -1.84
VCL-204ENST00000472585 SNURFQ9Y675 71 aa3.58□□□□□ -1.84
VCL-204ENST00000472585 ATP5EP56381 51 aaPredicted RBP3.57□□□□□ -1.84
VCL-204ENST00000472585 H0Y9P7 68 aa3.55□□□□□ -1.84
VCL-204ENST00000472585 H3BPC8 53 aa3.55□□□□□ -1.84
VCL-204ENST00000472585 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.55□□□□□ -1.84
VCL-204ENST00000472585 SERP1Q9Y6X1 66 aa3.55□□□□□ -1.84
VCL-204ENST00000472585 MP68P56378 58 aa3.53□□□□□ -1.84
VCL-204ENST00000472585 KRTAP19-7Q3SYF9 63 aa3.53□□□□□ -1.84
VCL-204ENST00000472585 KRTAP5-7Q6L8G8 165 aa3.51□□□□□ -1.85
VCL-204ENST00000472585 KRTAP19-3Q7Z4W3 81 aa3.5□□□□□ -1.85
VCL-204ENST00000472585 LINC00208Q96KT6 92 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 161.2 ms