RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 PDE6GP18545 87 aa2.9□□□□□ -1.95
HDAC3-206ENST00000471968 COX7BP24311 80 aa2.9□□□□□ -1.95
HDAC3-206ENST00000471968 RBM3P98179 157 aaKnown RBP2.9□□□□□ -1.95
HDAC3-206ENST00000471968 Q6ZRX8 168 aa2.9□□□□□ -1.95
HDAC3-206ENST00000471968 PRR15Q8IV56 129 aa2.9□□□□□ -1.95
HDAC3-206ENST00000471968 BRK1Q8WUW1 75 aa2.9□□□□□ -1.95
HDAC3-206ENST00000471968 TRBV7-4A0A0J9YYF1 115 aa2.89□□□□□ -1.95
HDAC3-206ENST00000471968 SPRR1AP35321 89 aa2.88□□□□□ -1.95
HDAC3-206ENST00000471968 LCE4AQ5TA78 99 aa2.88□□□□□ -1.95
HDAC3-206ENST00000471968 DEFB105AQ8NG35 78 aa2.88□□□□□ -1.95
HDAC3-206ENST00000471968 Q96NJ1 140 aa2.88□□□□□ -1.95
HDAC3-206ENST00000471968 KRTAP16-1A8MUX0 517 aa2.87□□□□□ -1.95
HDAC3-206ENST00000471968 CD164Q04900 197 aa2.87□□□□□ -1.95
HDAC3-206ENST00000471968 PMAIP1Q13794 54 aa2.87□□□□□ -1.95
HDAC3-206ENST00000471968 Q6ZQT0 140 aa2.87□□□□□ -1.95
HDAC3-206ENST00000471968 Q6ZVQ6 151 aa2.86□□□□□ -1.95
HDAC3-206ENST00000471968 TMEM254Q8TBM7 123 aa2.86□□□□□ -1.95
HDAC3-206ENST00000471968 Q9BRP9 147 aa2.86□□□□□ -1.95
HDAC3-206ENST00000471968 KRTAP4-8A0A0G2JLE6 195 aa2.85□□□□□ -1.95
HDAC3-206ENST00000471968 H3BS24 57 aa2.85□□□□□ -1.95
HDAC3-206ENST00000471968 ELOF1P60002 83 aaKnown RBP2.85□□□□□ -1.95
HDAC3-206ENST00000471968 NREPQ16612 68 aa2.85□□□□□ -1.95
HDAC3-206ENST00000471968 IGFL1Q6UW32 110 aa2.85□□□□□ -1.95
HDAC3-206ENST00000471968 ST20-AS1Q8NBB2 130 aa2.85□□□□□ -1.95
HDAC3-206ENST00000471968 KRTAP4-8Q9BYQ9 185 aa2.85□□□□□ -1.95
HDAC3-206ENST00000471968 SNURFQ9Y675 71 aa2.85□□□□□ -1.95
HDAC3-206ENST00000471968 Q1T7F1 81 aa2.84□□□□□ -1.95
HDAC3-206ENST00000471968 NOTCH2NLQ7Z3S9 236 aa2.84□□□□□ -1.95
HDAC3-206ENST00000471968 A8MUU9 505 aa2.83□□□□□ -1.96
HDAC3-206ENST00000471968 BPY2O14599 106 aa2.83□□□□□ -1.96
HDAC3-206ENST00000471968 LINC00575Q6W349 94 aa2.83□□□□□ -1.96
HDAC3-206ENST00000471968 KRTAP4-6Q9BYQ5 205 aa2.83□□□□□ -1.96
HDAC3-206ENST00000471968 hDV103S1A0JD37 113 aa2.82□□□□□ -1.96
HDAC3-206ENST00000471968 OCR1Q9BZK8 76 aa2.82□□□□□ -1.96
HDAC3-206ENST00000471968 A0A1B0GW54 56 aa2.8□□□□□ -1.96
HDAC3-206ENST00000471968 SPRR1BP22528 89 aa2.8□□□□□ -1.96
HDAC3-206ENST00000471968 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.8□□□□□ -1.96
HDAC3-206ENST00000471968 Q6ZQY7 126 aa2.8□□□□□ -1.96
HDAC3-206ENST00000471968 SPRR2GQ9BYE4 73 aa2.8□□□□□ -1.96
HDAC3-206ENST00000471968 A0A1W2PNM2 257 aa2.79□□□□□ -1.96
HDAC3-206ENST00000471968 IGKV4-1P06312 121 aa2.79□□□□□ -1.96
HDAC3-206ENST00000471968 KTN1-AS1Q86SY8 53 aa2.79□□□□□ -1.96
HDAC3-206ENST00000471968 CYP4F30PQ9H0H9 118 aa2.79□□□□□ -1.96
HDAC3-206ENST00000471968 NDUFB1O75438 58 aa2.78□□□□□ -1.96
HDAC3-206ENST00000471968 IGLV5-48A0A075B6I7 105 aa2.77□□□□□ -1.97
HDAC3-206ENST00000471968 NDUFS5O43920 106 aa2.77□□□□□ -1.97
HDAC3-206ENST00000471968 TRAV22A0A0B4J277 110 aa2.76□□□□□ -1.97
HDAC3-206ENST00000471968 C1orf64Q8NEQ6 169 aa2.76□□□□□ -1.97
HDAC3-206ENST00000471968 KRTAP12-2P59991 146 aa2.74□□□□□ -1.97
HDAC3-206ENST00000471968 SPANXA2-OT1Q8N9U9 137 aa2.74□□□□□ -1.97
HDAC3-206ENST00000471968 H3BPC8 53 aa2.73□□□□□ -1.97
HDAC3-206ENST00000471968 KRTAP4-7Q9BYR0 210 aa2.73□□□□□ -1.97
HDAC3-206ENST00000471968 PSPHP1O15172 72 aa2.72□□□□□ -1.97
HDAC3-206ENST00000471968 PRO2289Q9P1D8 64 aa2.72□□□□□ -1.97
HDAC3-206ENST00000471968 A0A087WSZ3 146 aa2.71□□□□□ -1.98
HDAC3-206ENST00000471968 LOC101927531A0A1B0GV80 90 aa2.71□□□□□ -1.98
HDAC3-206ENST00000471968 A8MUN3 132 aa2.71□□□□□ -1.98
HDAC3-206ENST00000471968 MP68P56378 58 aa2.71□□□□□ -1.98
HDAC3-206ENST00000471968 C7orf65Q6ZTY9 151 aa2.71□□□□□ -1.98
HDAC3-206ENST00000471968 Q8N9L7 120 aa2.71□□□□□ -1.98
HDAC3-206ENST00000471968 HCG22E2RYF7 251 aa2.7□□□□□ -1.98
HDAC3-206ENST00000471968 CHKB-CPT1BH3BT56 60 aa2.7□□□□□ -1.98
HDAC3-206ENST00000471968 LINC00208Q96KT6 92 aa2.7□□□□□ -1.98
HDAC3-206ENST00000471968 CDC42SE1Q9NRR8 79 aa2.7□□□□□ -1.98
HDAC3-206ENST00000471968 MT1XP80297 61 aa2.69□□□□□ -1.98
HDAC3-206ENST00000471968 LCA10Q71F78 164 aa2.68□□□□□ -1.98
HDAC3-206ENST00000471968 PRR15LQ9BU68 103 aa2.68□□□□□ -1.98
HDAC3-206ENST00000471968 A6NED7 52 aa2.67□□□□□ -1.98
HDAC3-206ENST00000471968 LCE5AQ5TCM9 118 aa2.67□□□□□ -1.98
HDAC3-206ENST00000471968 KRTAP5-4Q6L8H1 288 aa2.67□□□□□ -1.98
HDAC3-206ENST00000471968 K7EQZ3 153 aa2.66□□□□□ -1.98
HDAC3-206ENST00000471968 DSCR10P59022 87 aa2.66□□□□□ -1.98
HDAC3-206ENST00000471968 WFDC13Q8IUB5 93 aa2.66□□□□□ -1.98
HDAC3-206ENST00000471968 SPTSSBQ8NFR3 76 aa2.66□□□□□ -1.98
HDAC3-206ENST00000471968 LINC00313P59037 77 aa2.65□□□□□ -1.99
HDAC3-206ENST00000471968 LINC01558Q9Y6Z2 57 aa2.65□□□□□ -1.99
HDAC3-206ENST00000471968 IGHV6-1A0A0B4J1U7 121 aa2.64□□□□□ -1.99
HDAC3-206ENST00000471968 C8orf87E5RJ46 101 aa2.64□□□□□ -1.99
HDAC3-206ENST00000471968 H0Y9P7 68 aa2.64□□□□□ -1.99
HDAC3-206ENST00000471968 SPINK7P58062 85 aa2.64□□□□□ -1.99
HDAC3-206ENST00000471968 CASC2Q6XLA1 102 aa2.64□□□□□ -1.99
HDAC3-206ENST00000471968 A8MU10 97 aa2.63□□□□□ -1.99
HDAC3-206ENST00000471968 DEFB116Q30KQ4 102 aa2.63□□□□□ -1.99
HDAC3-206ENST00000471968 COA5Q86WW8 74 aa2.63□□□□□ -1.99
HDAC3-206ENST00000471968 H1FX-AS1Q4G0G2 97 aa2.62□□□□□ -1.99
HDAC3-206ENST00000471968 KRTAP20-2Q3LI61 65 aa2.61□□□□□ -1.99
HDAC3-206ENST00000471968 A0A1B0GVX0 72 aa2.6□□□□□ -1.99
HDAC3-206ENST00000471968 TP53AIP1Q9HCN2 124 aa2.6□□□□□ -1.99
HDAC3-206ENST00000471968 KRTAP5-8O75690 187 aa2.59□□□□□ -1.99
HDAC3-206ENST00000471968 LINC01554Q52M75 96 aa2.59□□□□□ -1.99
HDAC3-206ENST00000471968 LINC00472Q9H8W2 130 aa2.58□□□□□ -2
HDAC3-206ENST00000471968 KRTAP10-7P60409 375 aaPredicted RBP2.57□□□□□ -2
HDAC3-206ENST00000471968 KRTAP4-11Q9BYQ6 195 aa2.57□□□□□ -2
HDAC3-206ENST00000471968 KRTAP19-3Q7Z4W3 81 aa2.56□□□□□ -2
HDAC3-206ENST00000471968 C8orf17Q9NRJ1 99 aa2.56□□□□□ -2
HDAC3-206ENST00000471968 MMP24-AS1A0A0U1RRL7 71 aa2.55□□□□□ -2
HDAC3-206ENST00000471968 MRPL34Q9BQ48 92 aaKnown RBP2.53□□□□□ -2
HDAC3-206ENST00000471968 SYNE1Q8NF91 8797 aaKnown RBP2.52□□□□□ -2.01
HDAC3-206ENST00000471968 KRTAP10-12P60413 245 aa2.52□□□□□ -2.01
HDAC3-206ENST00000471968 SPATA8Q6RVD6 105 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms