RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 KRTAP13-4Q3LI77 160 aa2.26□□□□□ -2.05
CKS1B-204ENST00000471245 C12orf57Q99622 126 aa2.26□□□□□ -2.05
CKS1B-204ENST00000471245 SPANXDQ9BXN6 97 aa2.26□□□□□ -2.05
CKS1B-204ENST00000471245 MUC19Q7Z5P9 8384 aa2.25□□□□□ -2.05
CKS1B-204ENST00000471245 hDV103S1A0JD37 113 aa2.25□□□□□ -2.05
CKS1B-204ENST00000471245 DLEU1O43261 78 aa2.25□□□□□ -2.05
CKS1B-204ENST00000471245 KRTAP2-3P0C7H8 128 aa2.25□□□□□ -2.05
CKS1B-204ENST00000471245 KRTAP12-1P59990 96 aa2.25□□□□□ -2.05
CKS1B-204ENST00000471245 TMEM254Q8TBM7 123 aa2.25□□□□□ -2.05
CKS1B-204ENST00000471245 KRTAP2-4Q9BYR9 128 aa2.25□□□□□ -2.05
CKS1B-204ENST00000471245 TRBV7-7A0A0K0K1E9 115 aa2.24□□□□□ -2.05
CKS1B-204ENST00000471245 APOC3P02656 99 aa2.24□□□□□ -2.05
CKS1B-204ENST00000471245 Q96NJ1 140 aa2.24□□□□□ -2.05
CKS1B-204ENST00000471245 KRTAP5-7Q6L8G8 165 aa2.23□□□□□ -2.05
CKS1B-204ENST00000471245 MDN1Q9NU22 5596 aa2.22□□□□□ -2.05
CKS1B-204ENST00000471245 ZNF815PA8K554 130 aa2.22□□□□□ -2.05
CKS1B-204ENST00000471245 KRTAP12-4P60329 112 aa2.22□□□□□ -2.05
CKS1B-204ENST00000471245 SMIM11BQ8TCY0 68 aa2.22□□□□□ -2.05
CKS1B-204ENST00000471245 RAB37Q96AX2 223 aa2.22□□□□□ -2.05
CKS1B-204ENST00000471245 KMT2DO14686 5537 aa2.22□□□□□ -2.05
CKS1B-204ENST00000471245 SYS1-DBNDD2H3BUS1 97 aa2.21□□□□□ -2.06
CKS1B-204ENST00000471245 SMIM6P0DI80 62 aa2.21□□□□□ -2.06
CKS1B-204ENST00000471245 LINC01545Q5VT33 79 aa2.21□□□□□ -2.06
CKS1B-204ENST00000471245 COA5Q86WW8 74 aa2.21□□□□□ -2.06
CKS1B-204ENST00000471245 SVBPQ8N300 66 aa2.21□□□□□ -2.06
CKS1B-204ENST00000471245 CLEC2BQ92478 149 aa2.21□□□□□ -2.06
CKS1B-204ENST00000471245 VPS25Q9BRG1 176 aa2.21□□□□□ -2.06
CKS1B-204ENST00000471245 H3BUT2 72 aa2.2□□□□□ -2.06
CKS1B-204ENST00000471245 OCIAD2Q56VL3 154 aa2.2□□□□□ -2.06
CKS1B-204ENST00000471245 LINC00575Q6W349 94 aa2.2□□□□□ -2.06
CKS1B-204ENST00000471245 Q6ZQY7 126 aa2.2□□□□□ -2.06
CKS1B-204ENST00000471245 MUSTN1Q8IVN3 82 aa2.2□□□□□ -2.06
CKS1B-204ENST00000471245 C14orf144Q96I85 54 aa2.2□□□□□ -2.06
CKS1B-204ENST00000471245 TRACP01848 142 aa2.19□□□□□ -2.06
CKS1B-204ENST00000471245 Q6JHZ5 121 aa2.19□□□□□ -2.06
CKS1B-204ENST00000471245 TEN1Q86WV5 123 aa2.19□□□□□ -2.06
CKS1B-204ENST00000471245 A6NN06 94 aa2.18□□□□□ -2.06
CKS1B-204ENST00000471245 F8WEM9 126 aa2.18□□□□□ -2.06
CKS1B-204ENST00000471245 C3orf79P0CE67 100 aa2.18□□□□□ -2.06
CKS1B-204ENST00000471245 IFITM1P13164 125 aa2.18□□□□□ -2.06
CKS1B-204ENST00000471245 TRAV13-2A0A0B4J235 113 aa2.17□□□□□ -2.06
CKS1B-204ENST00000471245 hADV29S1A0JD25 119 aa2.17□□□□□ -2.06
CKS1B-204ENST00000471245 J3QR89 54 aa2.17□□□□□ -2.06
CKS1B-204ENST00000471245 ATOH7Q8N100 152 aa2.16□□□□□ -2.06
CKS1B-204ENST00000471245 KRTAP2-1Q9BYU5 128 aa2.16□□□□□ -2.06
CKS1B-204ENST00000471245 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.15□□□□□ -2.07
CKS1B-204ENST00000471245 SPRR2EP22531 72 aa2.13□□□□□ -2.07
CKS1B-204ENST00000471245 SPRR2BP35325 72 aa2.13□□□□□ -2.07
CKS1B-204ENST00000471245 SPRR2AP35326 72 aa2.13□□□□□ -2.07
CKS1B-204ENST00000471245 KRTDAPP60985 99 aa2.13□□□□□ -2.07
CKS1B-204ENST00000471245 PPDPFLQ8WWR9 84 aa2.13□□□□□ -2.07
CKS1B-204ENST00000471245 COPS9Q8WXC6 57 aa2.13□□□□□ -2.07
CKS1B-204ENST00000471245 SNHG12Q9BXW3 62 aa2.13□□□□□ -2.07
CKS1B-204ENST00000471245 K7ERU9 68 aa2.12□□□□□ -2.07
CKS1B-204ENST00000471245 MT1BP07438 61 aa2.12□□□□□ -2.07
CKS1B-204ENST00000471245 MIR22HGQ0VDD5 57 aa2.12□□□□□ -2.07
CKS1B-204ENST00000471245 LINC00472Q9H8W2 130 aa2.12□□□□□ -2.07
CKS1B-204ENST00000471245 FAM236AA0A1B0GUQ0 79 aa2.11□□□□□ -2.07
CKS1B-204ENST00000471245 FAM236BA0A1B0GV22 79 aa2.11□□□□□ -2.07
CKS1B-204ENST00000471245 SPINK7P58062 85 aa2.11□□□□□ -2.07
CKS1B-204ENST00000471245 CYSTM1Q9H1C7 97 aa2.11□□□□□ -2.07
CKS1B-204ENST00000471245 GPR98Q8WXG9 6306 aa2.11□□□□□ -2.07
CKS1B-204ENST00000471245 SPRR2FQ96RM1 72 aa2.1□□□□□ -2.07
CKS1B-204ENST00000471245 ORMDL1Q9P0S3 153 aa2.1□□□□□ -2.07
CKS1B-204ENST00000471245 COX7CP15954 63 aa2.09□□□□□ -2.07
CKS1B-204ENST00000471245 BVES-AS1Q5T3Y7 98 aa2.09□□□□□ -2.07
CKS1B-204ENST00000471245 LOC110117498A0A087WWA1 95 aa2.08□□□□□ -2.08
CKS1B-204ENST00000471245 CASC2Q6XLA1 102 aa2.08□□□□□ -2.08
CKS1B-204ENST00000471245 WFDC13Q8IUB5 93 aa2.08□□□□□ -2.08
CKS1B-204ENST00000471245 TRBV7-4A0A0J9YYF1 115 aa2.07□□□□□ -2.08
CKS1B-204ENST00000471245 INE1O15225 51 aa2.07□□□□□ -2.08
CKS1B-204ENST00000471245 Q5VV11 94 aa2.07□□□□□ -2.08
CKS1B-204ENST00000471245 F8W1H4 67 aa2.06□□□□□ -2.08
CKS1B-204ENST00000471245 SPRR2DP22532 72 aa2.06□□□□□ -2.08
CKS1B-204ENST00000471245 KRTAP19-8Q3LI54 63 aa2.06□□□□□ -2.08
CKS1B-204ENST00000471245 DSTQ03001 7570 aaKnown RBP2.05□□□□□ -2.08
CKS1B-204ENST00000471245 H0YGX0 51 aa2.05□□□□□ -2.08
CKS1B-204ENST00000471245 NAA38Q9BRA0 125 aaKnown RBP2.05□□□□□ -2.08
CKS1B-204ENST00000471245 M0R143 59 aa2.04□□□□□ -2.08
CKS1B-204ENST00000471245 CCKP06307 115 aa2.04□□□□□ -2.08
CKS1B-204ENST00000471245 COX8AP10176 69 aa2.04□□□□□ -2.08
CKS1B-204ENST00000471245 H1FX-AS1Q4G0G2 97 aa2.04□□□□□ -2.08
CKS1B-204ENST00000471245 CDC42SE1Q9NRR8 79 aa2.04□□□□□ -2.08
CKS1B-204ENST00000471245 SPRR2GQ9BYE4 73 aa2.03□□□□□ -2.08
CKS1B-204ENST00000471245 IGKV3D-7A0A0C4DH55 119 aa2.01□□□□□ -2.09
CKS1B-204ENST00000471245 HIGD1BQ9P298 99 aa2.01□□□□□ -2.09
CKS1B-204ENST00000471245 PRO1854Q9UHT4 67 aa2.01□□□□□ -2.09
CKS1B-204ENST00000471245 SNURFQ9Y675 71 aa2.01□□□□□ -2.09
CKS1B-204ENST00000471245 CCDC179H3BU77 68 aa2□□□□□ -2.09
CKS1B-204ENST00000471245 SNCGO76070 127 aa2□□□□□ -2.09
CKS1B-204ENST00000471245 KRTAP8-1Q8IUC2 63 aa2□□□□□ -2.09
CKS1B-204ENST00000471245 MMP24-AS1A0A0U1RRL7 71 aa1.98□□□□□ -2.09
CKS1B-204ENST00000471245 RBM3P98179 157 aaKnown RBP1.98□□□□□ -2.09
CKS1B-204ENST00000471245 HSD52Q0P140 79 aa1.98□□□□□ -2.09
CKS1B-204ENST00000471245 COL5A1-AS1Q5SY13 56 aa1.98□□□□□ -2.09
CKS1B-204ENST00000471245 DNAL4O96015 105 aa1.97□□□□□ -2.09
CKS1B-204ENST00000471245 SPATA45Q537H7 98 aa1.97□□□□□ -2.09
CKS1B-204ENST00000471245 JMJD7-PLA2G4BH0Y9G9 81 aa1.96□□□□□ -2.1
CKS1B-204ENST00000471245 PDE6GP18545 87 aa1.96□□□□□ -2.1
CKS1B-204ENST00000471245 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms