RNA–Protein interactions for RNA: ENST00000470495.1

HOXB3-205, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-205ENST00000470495 HYDINQ4G0P3 5121 aa8.82□□□□□ -1
HOXB3-205ENST00000470495 KRTAP15-1Q3LI76 137 aa8.81□□□□□ -1
HOXB3-205ENST00000470495 FAT1Q14517 4588 aa8.74□□□□□ -1.01
HOXB3-205ENST00000470495 KRTAP10-4P60372 401 aaPredicted RBP8.7□□□□□ -1.02
HOXB3-205ENST00000470495 DYNC1H1Q14204 4646 aaKnown RBP8.7□□□□□ -1.02
HOXB3-205ENST00000470495 KRTAP10-8P60410 259 aa8.68□□□□□ -1.02
HOXB3-205ENST00000470495 VPS13BQ7Z7G8 4022 aa8.66□□□□□ -1.02
HOXB3-205ENST00000470495 S4R3F8 94 aa8.65□□□□□ -1.02
HOXB3-205ENST00000470495 R4GN34 69 aa8.65□□□□□ -1.03
HOXB3-205ENST00000470495 XP32Q5T750 250 aa8.64□□□□□ -1.03
HOXB3-205ENST00000470495 PKHD1P08F94 4074 aa8.59□□□□□ -1.03
HOXB3-205ENST00000470495 SACSQ9NZJ4 4579 aa8.57□□□□□ -1.04
HOXB3-205ENST00000470495 FAT2Q9NYQ8 4349 aa8.56□□□□□ -1.04
HOXB3-205ENST00000470495 PKD1P98161 4303 aa8.5□□□□□ -1.05
HOXB3-205ENST00000470495 KRTAP3-1Q9BYR8 98 aa8.47□□□□□ -1.05
HOXB3-205ENST00000470495 MT1HL1P0DM35 61 aa8.38□□□□□ -1.07
HOXB3-205ENST00000470495 KMT2CQ8NEZ4 4911 aaKnown RBP8.38□□□□□ -1.07
HOXB3-205ENST00000470495 APOBP04114 4563 aaKnown RBP8.38□□□□□ -1.07
HOXB3-205ENST00000470495 RYR2Q92736 4967 aa8.35□□□□□ -1.07
HOXB3-205ENST00000470495 M0QZ58 72 aa8.33□□□□□ -1.08
HOXB3-205ENST00000470495 LRP1Q07954 4544 aaKnown RBP8.32□□□□□ -1.08
HOXB3-205ENST00000470495 KRTAP4-5Q9BYR2 181 aa8.31□□□□□ -1.08
HOXB3-205ENST00000470495 KIAA1109Q2LD37 5005 aa8.31□□□□□ -1.08
HOXB3-205ENST00000470495 MYCBP2O75592 4640 aa8.25□□□□□ -1.09
HOXB3-205ENST00000470495 PRO2289Q9P1D8 64 aa8.24□□□□□ -1.09
HOXB3-205ENST00000470495 RYR3Q15413 4870 aa8.24□□□□□ -1.09
HOXB3-205ENST00000470495 KRTAP17-1Q9BYP8 105 aa8.21□□□□□ -1.09
HOXB3-205ENST00000470495 RYR1P21817 5038 aa8.18□□□□□ -1.1
HOXB3-205ENST00000470495 KRTAP12-2P59991 146 aa8.15□□□□□ -1.11
HOXB3-205ENST00000470495 PP632Q6XCG6 107 aa8.12□□□□□ -1.11
HOXB3-205ENST00000470495 M0R2T5 61 aa8.08□□□□□ -1.12
HOXB3-205ENST00000470495 HSPG2P98160 4391 aa8.06□□□□□ -1.12
HOXB3-205ENST00000470495 FAT3Q8TDW7 4589 aa8.06□□□□□ -1.12
HOXB3-205ENST00000470495 KRTAP3-3Q9BYR6 98 aa8.06□□□□□ -1.12
HOXB3-205ENST00000470495 KRTAP10-6P60371 365 aaPredicted RBP8.02□□□□□ -1.13
HOXB3-205ENST00000470495 KRTAP13-4Q3LI77 160 aa8□□□□□ -1.13
HOXB3-205ENST00000470495 PKHD1L1Q86WI1 4243 aa7.94□□□□□ -1.14
HOXB3-205ENST00000470495 KRTAP3-2Q9BYR7 98 aa7.91□□□□□ -1.14
HOXB3-205ENST00000470495 KRTAP12-1P59990 96 aa7.9□□□□□ -1.15
HOXB3-205ENST00000470495 EPPK1P58107 5090 aaKnown RBP7.87□□□□□ -1.15
HOXB3-205ENST00000470495 INE1O15225 51 aa7.85□□□□□ -1.15
HOXB3-205ENST00000470495 TNXBP22105 4242 aa7.83□□□□□ -1.16
HOXB3-205ENST00000470495 KRTAP23-1A1A580 65 aa7.82□□□□□ -1.16
HOXB3-205ENST00000470495 LRP2P98164 4655 aa7.82□□□□□ -1.16
HOXB3-205ENST00000470495 TNP1P09430 55 aa7.76□□□□□ -1.17
HOXB3-205ENST00000470495 KRTAP4-1Q9BYQ7 146 aa7.72□□□□□ -1.17
HOXB3-205ENST00000470495 LPAP08519 4548 aa7.7□□□□□ -1.18
HOXB3-205ENST00000470495 HERC2O95714 4834 aa7.7□□□□□ -1.18
HOXB3-205ENST00000470495 ABCA13Q86UQ4 5058 aa7.59□□□□□ -1.2
HOXB3-205ENST00000470495 LORP23490 312 aaPredicted RBP7.57□□□□□ -1.2
HOXB3-205ENST00000470495 KRTAP10-10P60014 251 aa7.49□□□□□ -1.21
HOXB3-205ENST00000470495 BIRC6Q9NR09 4857 aa7.43□□□□□ -1.22
HOXB3-205ENST00000470495 MUC2Q02817 5179 aa7.25□□□□□ -1.25
HOXB3-205ENST00000470495 HERC1Q15751 4861 aa7.21□□□□□ -1.25
HOXB3-205ENST00000470495 KRTAP19-2Q3LHN2 52 aa7.09□□□□□ -1.27
HOXB3-205ENST00000470495 MT1HP80294 61 aa7.09□□□□□ -1.27
HOXB3-205ENST00000470495 MUC17Q685J3 4493 aa7.06□□□□□ -1.28
HOXB3-205ENST00000470495 PCLOQ9Y6V0 5065 aa7.05□□□□□ -1.28
HOXB3-205ENST00000470495 RNF213Q63HN8 5207 aa6.98□□□□□ -1.29
HOXB3-205ENST00000470495 LCE2CQ5TA81 110 aa6.97□□□□□ -1.29
HOXB3-205ENST00000470495 FAT4Q6V0I7 4981 aa6.97□□□□□ -1.29
HOXB3-205ENST00000470495 MT2AP02795 61 aa6.95□□□□□ -1.3
HOXB3-205ENST00000470495 HMCN2Q8NDA2 5059 aa6.94□□□□□ -1.3
HOXB3-205ENST00000470495 MT1FP04733 61 aa6.93□□□□□ -1.3
HOXB3-205ENST00000470495 FLGP20930 4061 aaPredicted RBP6.92□□□□□ -1.3
HOXB3-205ENST00000470495 UBR4Q5T4S7 5183 aa6.88□□□□□ -1.31
HOXB3-205ENST00000470495 SPRR2GQ9BYE4 73 aa6.88□□□□□ -1.31
HOXB3-205ENST00000470495 KRTAP19-1Q8IUB9 90 aa6.84□□□□□ -1.32
HOXB3-205ENST00000470495 LCE3AQ5TA76 89 aa6.74□□□□□ -1.33
HOXB3-205ENST00000470495 KRTAP9-8Q9BYQ0 159 aa6.72□□□□□ -1.33
HOXB3-205ENST00000470495 KRTAP10-12P60413 245 aa6.66□□□□□ -1.34
HOXB3-205ENST00000470495 KRTAP19-8Q3LI54 63 aa6.54□□□□□ -1.36
HOXB3-205ENST00000470495 MT1BP07438 61 aa6.52□□□□□ -1.36
HOXB3-205ENST00000470495 KRTAP12-3P60328 96 aa6.51□□□□□ -1.37
HOXB3-205ENST00000470495 KRTAP9-3Q9BYQ3 159 aa6.46□□□□□ -1.38
HOXB3-205ENST00000470495 SPRR5A0A1B0GTR4 108 aa6.45□□□□□ -1.38
HOXB3-205ENST00000470495 MT1XP80297 61 aa6.45□□□□□ -1.38
HOXB3-205ENST00000470495 KRTAP10-5P60370 271 aa6.43□□□□□ -1.38
HOXB3-205ENST00000470495 KRTAP10-7P60409 375 aaPredicted RBP6.39□□□□□ -1.39
HOXB3-205ENST00000470495 KRTAP8-1Q8IUC2 63 aa6.3□□□□□ -1.4
HOXB3-205ENST00000470495 LCE2BO14633 110 aa6.29□□□□□ -1.4
HOXB3-205ENST00000470495 FSIP2Q5CZC0 6907 aa6.21□□□□□ -1.42
HOXB3-205ENST00000470495 KRTAP19-5Q3LI72 72 aa6.2□□□□□ -1.42
HOXB3-205ENST00000470495 LCE2AQ5TA79 106 aaPredicted RBP6.15□□□□□ -1.42
HOXB3-205ENST00000470495 USH2AO75445 5202 aa6.15□□□□□ -1.42
HOXB3-205ENST00000470495 KRTAP4-8A0A0G2JLE6 195 aa6.14□□□□□ -1.43
HOXB3-205ENST00000470495 KRTAP4-8Q9BYQ9 185 aa6.14□□□□□ -1.43
HOXB3-205ENST00000470495 CRCT1Q9UGL9 99 aa6.01□□□□□ -1.45
HOXB3-205ENST00000470495 SYNE1Q8NF91 8797 aaKnown RBP5.98□□□□□ -1.45
HOXB3-205ENST00000470495 LCE3CQ5T5A8 94 aa5.94□□□□□ -1.46
HOXB3-205ENST00000470495 KMT2DO14686 5537 aa5.93□□□□□ -1.46
HOXB3-205ENST00000470495 KRTAP12-4P60329 112 aa5.88□□□□□ -1.47
HOXB3-205ENST00000470495 KRTAP4-7Q9BYR0 210 aa5.78□□□□□ -1.48
HOXB3-205ENST00000470495 OBSCNQ5VST9 7968 aa5.76□□□□□ -1.49
HOXB3-205ENST00000470495 SPRR2FQ96RM1 72 aa5.71□□□□□ -1.49
HOXB3-205ENST00000470495 KRTAP19-7Q3SYF9 63 aa5.67□□□□□ -1.5
HOXB3-205ENST00000470495 KRTAP19-6Q3LI70 58 aa5.67□□□□□ -1.5
HOXB3-205ENST00000470495 MT1EP04732 61 aa5.65□□□□□ -1.51
HOXB3-205ENST00000470495 MT1LQ93083 61 aa5.63□□□□□ -1.51
HOXB3-205ENST00000470495 SSPOA2VEC9 5147 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms