RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 DEFB109BQ30KR1 87 aa1.28□□□□□ -2.2
COL11A1-208ENST00000470170 VPS13CQ709C8 3753 aa1.28□□□□□ -2.21
COL11A1-208ENST00000470170 HERC2O95714 4834 aa1.27□□□□□ -2.21
COL11A1-208ENST00000470170 MUC2Q02817 5179 aa1.27□□□□□ -2.21
COL11A1-208ENST00000470170 CD52P31358 61 aa1.26□□□□□ -2.21
COL11A1-208ENST00000470170 COL7A1Q02388 2944 aa1.26□□□□□ -2.21
COL11A1-208ENST00000470170 PLCE1Q9P212 2302 aa1.26□□□□□ -2.21
COL11A1-208ENST00000470170 ANK2Q01484 3957 aa1.25□□□□□ -2.21
COL11A1-208ENST00000470170 FSIP2Q5CZC0 6907 aa1.25□□□□□ -2.21
COL11A1-208ENST00000470170 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
COL11A1-208ENST00000470170 ROS1P08922 2347 aa1.25□□□□□ -2.21
COL11A1-208ENST00000470170 H3BUA1 57 aa1.25□□□□□ -2.21
COL11A1-208ENST00000470170 RPS27P42677 84 aaKnown RBP1.25□□□□□ -2.21
COL11A1-208ENST00000470170 RPS27LQ71UM5 84 aaKnown RBP1.25□□□□□ -2.21
COL11A1-208ENST00000470170 KLK9Q2XQG4 91 aa1.24□□□□□ -2.21
COL11A1-208ENST00000470170 WNK2Q9Y3S1 2297 aa1.23□□□□□ -2.21
COL11A1-208ENST00000470170 ZNF469Q96JG9 3925 aaPredicted RBP1.23□□□□□ -2.21
COL11A1-208ENST00000470170 WT1-ASQ06250 92 aa1.23□□□□□ -2.21
COL11A1-208ENST00000470170 KRTAP10-4P60372 401 aaPredicted RBP1.22□□□□□ -2.21
COL11A1-208ENST00000470170 WFDC10BQ8IUB3 73 aa1.22□□□□□ -2.21
COL11A1-208ENST00000470170 ABCA13Q86UQ4 5058 aa1.21□□□□□ -2.22
COL11A1-208ENST00000470170 USF3Q68DE3 2245 aa1.21□□□□□ -2.22
COL11A1-208ENST00000470170 PRKDCP78527 4128 aaKnown RBP1.21□□□□□ -2.22
COL11A1-208ENST00000470170 HERC1Q15751 4861 aa1.2□□□□□ -2.22
COL11A1-208ENST00000470170 KRTAP20-1Q3LI63 56 aa1.19□□□□□ -2.22
COL11A1-208ENST00000470170 TRRAPQ9Y4A5 3859 aa1.18□□□□□ -2.22
COL11A1-208ENST00000470170 IGLV5-48A0A075B6I7 105 aa1.18□□□□□ -2.22
COL11A1-208ENST00000470170 KAAG1Q9UBP8 84 aa1.18□□□□□ -2.22
COL11A1-208ENST00000470170 SRRM2Q9UQ35 2752 aaKnown RBP1.17□□□□□ -2.22
COL11A1-208ENST00000470170 DEFB131AP59861 70 aa1.17□□□□□ -2.22
COL11A1-208ENST00000470170 STATHP02808 62 aa1.16□□□□□ -2.22
COL11A1-208ENST00000470170 PRLHP81277 87 aa1.15□□□□□ -2.23
COL11A1-208ENST00000470170 S4R3F8 94 aa1.14□□□□□ -2.23
COL11A1-208ENST00000470170 U3KQA8 63 aa1.13□□□□□ -2.23
COL11A1-208ENST00000470170 DNAH1Q9P2D7 4330 aa1.13□□□□□ -2.23
COL11A1-208ENST00000470170 DEFB133Q30KQ1 61 aa1.12□□□□□ -2.23
COL11A1-208ENST00000470170 NOP10Q9NPE3 64 aaKnown RBP1.12□□□□□ -2.23
COL11A1-208ENST00000470170 NEBP20929 6669 aa1.12□□□□□ -2.23
COL11A1-208ENST00000470170 POLR2KP53803 58 aaKnown RBP1.11□□□□□ -2.23
COL11A1-208ENST00000470170 DEFB106AQ8N104 65 aa1.11□□□□□ -2.23
COL11A1-208ENST00000470170 GPR98Q8WXG9 6306 aa1.11□□□□□ -2.23
COL11A1-208ENST00000470170 SYNE2Q8WXH0 6885 aaKnown RBP1.11□□□□□ -2.23
COL11A1-208ENST00000470170 FAT4Q6V0I7 4981 aa1.1□□□□□ -2.23
COL11A1-208ENST00000470170 DYNC2H1Q8NCM8 4307 aaKnown RBP1.09□□□□□ -2.23
COL11A1-208ENST00000470170 RNF213Q63HN8 5207 aa1.09□□□□□ -2.23
COL11A1-208ENST00000470170 MMP24-AS1A0A0U1RRL7 71 aa1.09□□□□□ -2.23
COL11A1-208ENST00000470170 ALMS1Q8TCU4 4167 aa1.08□□□□□ -2.24
COL11A1-208ENST00000470170 SPINK6Q6UWN8 80 aa1.08□□□□□ -2.24
COL11A1-208ENST00000470170 CMYA5Q8N3K9 4069 aa1.08□□□□□ -2.24
COL11A1-208ENST00000470170 H0YGG7 62 aa1.07□□□□□ -2.24
COL11A1-208ENST00000470170 SACSQ9NZJ4 4579 aa1.07□□□□□ -2.24
COL11A1-208ENST00000470170 MACF1Q9UPN3 7388 aaKnown RBP1.07□□□□□ -2.24
COL11A1-208ENST00000470170 RPL39P62891 51 aaKnown RBP1.06□□□□□ -2.24
COL11A1-208ENST00000470170 KRTAP2-3P0C7H8 128 aa1.05□□□□□ -2.24
COL11A1-208ENST00000470170 DEFB104AQ8WTQ1 72 aa1.05□□□□□ -2.24
COL11A1-208ENST00000470170 ARHGAP5-AS1Q96IT6 56 aa1.05□□□□□ -2.24
COL11A1-208ENST00000470170 KRTAP2-4Q9BYR9 128 aa1.05□□□□□ -2.24
COL11A1-208ENST00000470170 HECTD4Q9Y4D8 3996 aa1.04□□□□□ -2.24
COL11A1-208ENST00000470170 CSMD3Q7Z407 3707 aa1.04□□□□□ -2.24
COL11A1-208ENST00000470170 SPINK1P00995 79 aa1.04□□□□□ -2.24
COL11A1-208ENST00000470170 SSPOA2VEC9 5147 aa1.04□□□□□ -2.24
COL11A1-208ENST00000470170 FRAS1Q86XX4 4008 aa1.04□□□□□ -2.24
COL11A1-208ENST00000470170 PKHD1P08F94 4074 aa1.03□□□□□ -2.25
COL11A1-208ENST00000470170 ANK3Q12955 4377 aaKnown RBP1.03□□□□□ -2.25
COL11A1-208ENST00000470170 LYSTQ99698 3801 aa1.02□□□□□ -2.25
COL11A1-208ENST00000470170 A8MTW9 85 aa1.02□□□□□ -2.25
COL11A1-208ENST00000470170 DEFB108AA8MXU0 73 aa1.02□□□□□ -2.25
COL11A1-208ENST00000470170 DEFB135Q30KP9 77 aa1.02□□□□□ -2.25
COL11A1-208ENST00000470170 RPL39LQ96EH5 51 aaKnown RBP1.02□□□□□ -2.25
COL11A1-208ENST00000470170 M0QY20 66 aa1.01□□□□□ -2.25
COL11A1-208ENST00000470170 HMCN2Q8NDA2 5059 aa1.01□□□□□ -2.25
COL11A1-208ENST00000470170 KMT2AQ03164 3969 aa1□□□□□ -2.25
COL11A1-208ENST00000470170 M0R2T5 61 aa0.99□□□□□ -2.25
COL11A1-208ENST00000470170 CLPSL2Q6UWE3 100 aa0.99□□□□□ -2.25
COL11A1-208ENST00000470170 KRTAP2-1Q9BYU5 128 aa0.99□□□□□ -2.25
COL11A1-208ENST00000470170 HSPG2P98160 4391 aa0.99□□□□□ -2.25
COL11A1-208ENST00000470170 HRNRQ86YZ3 2850 aaPredicted RBP0.97□□□□□ -2.25
COL11A1-208ENST00000470170 MYCBP2O75592 4640 aa0.97□□□□□ -2.25
COL11A1-208ENST00000470170 SMR3BP02814 79 aaPredicted RBP0.97□□□□□ -2.25
COL11A1-208ENST00000470170 LEAP2Q969E1 77 aa0.96□□□□□ -2.26
COL11A1-208ENST00000470170 TOMM7Q9P0U1 55 aa0.96□□□□□ -2.26
COL11A1-208ENST00000470170 LRP2P98164 4655 aa0.96□□□□□ -2.26
COL11A1-208ENST00000470170 M0QZ58 72 aa0.95□□□□□ -2.26
COL11A1-208ENST00000470170 FAT2Q9NYQ8 4349 aa0.95□□□□□ -2.26
COL11A1-208ENST00000470170 HUWE1Q7Z6Z7 4374 aaKnown RBP0.94□□□□□ -2.26
COL11A1-208ENST00000470170 DNAH9Q9NYC9 4486 aa0.94□□□□□ -2.26
COL11A1-208ENST00000470170 KMT2DO14686 5537 aa0.94□□□□□ -2.26
COL11A1-208ENST00000470170 C9orf92A6NGG3 77 aa0.92□□□□□ -2.26
COL11A1-208ENST00000470170 LINC01590Q5TEZ4 76 aa0.92□□□□□ -2.26
COL11A1-208ENST00000470170 TTTY10Q9BZA0 68 aa0.92□□□□□ -2.26
COL11A1-208ENST00000470170 DNAH7Q8WXX0 4024 aa0.92□□□□□ -2.26
COL11A1-208ENST00000470170 DNAH11Q96DT5 4516 aa0.92□□□□□ -2.26
COL11A1-208ENST00000470170 AHNAK2Q8IVF2 5795 aa0.91□□□□□ -2.26
COL11A1-208ENST00000470170 DYNC1H1Q14204 4646 aaKnown RBP0.91□□□□□ -2.26
COL11A1-208ENST00000470170 PRCDQ00LT1 54 aa0.9□□□□□ -2.27
COL11A1-208ENST00000470170 KRTAP19-3Q7Z4W3 81 aa0.9□□□□□ -2.27
COL11A1-208ENST00000470170 STARD9Q9P2P6 4700 aa0.9□□□□□ -2.27
COL11A1-208ENST00000470170 DSTQ03001 7570 aaKnown RBP0.9□□□□□ -2.27
COL11A1-208ENST00000470170 FAT1Q14517 4588 aa0.89□□□□□ -2.27
COL11A1-208ENST00000470170 APOBP04114 4563 aaKnown RBP0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms