RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 RYR2Q92736 4967 aa6.27□□□□□ -1.41
VARS2-205ENST00000469358 A0A0D9SG42 100 aa6.27□□□□□ -1.41
VARS2-205ENST00000469358 KRTAP10-8P60410 259 aa6.26□□□□□ -1.41
VARS2-205ENST00000469358 KRTAP25-1Q3LHN0 102 aa6.26□□□□□ -1.41
VARS2-205ENST00000469358 KRTAP13-4Q3LI77 160 aa6.25□□□□□ -1.41
VARS2-205ENST00000469358 TNXBP22105 4242 aa6.24□□□□□ -1.41
VARS2-205ENST00000469358 KRTAP3-3Q9BYR6 98 aa6.23□□□□□ -1.41
VARS2-205ENST00000469358 KRTAP10-6P60371 365 aaPredicted RBP6.21□□□□□ -1.41
VARS2-205ENST00000469358 LPAP08519 4548 aa6.21□□□□□ -1.42
VARS2-205ENST00000469358 K7ERS5 55 aa6.16□□□□□ -1.42
VARS2-205ENST00000469358 KRTAP3-2Q9BYR7 98 aa6.16□□□□□ -1.42
VARS2-205ENST00000469358 P0C880 135 aa6.15□□□□□ -1.42
VARS2-205ENST00000469358 KRTAP17-1Q9BYP8 105 aa6.15□□□□□ -1.42
VARS2-205ENST00000469358 H3BS24 57 aa6.14□□□□□ -1.43
VARS2-205ENST00000469358 XP32Q5T750 250 aa6.14□□□□□ -1.43
VARS2-205ENST00000469358 RYR3Q15413 4870 aa6.13□□□□□ -1.43
VARS2-205ENST00000469358 RPL37P61927 97 aaKnown RBP6.12□□□□□ -1.43
VARS2-205ENST00000469358 Q5VSD8 79 aa6.11□□□□□ -1.43
VARS2-205ENST00000469358 S4R3F8 94 aa6.11□□□□□ -1.43
VARS2-205ENST00000469358 ROMO1P60602 79 aa6.11□□□□□ -1.43
VARS2-205ENST00000469358 KIAA1109Q2LD37 5005 aa6.1□□□□□ -1.43
VARS2-205ENST00000469358 C10orf95Q9H7T3 257 aa6.1□□□□□ -1.43
VARS2-205ENST00000469358 LRP2P98164 4655 aa6.09□□□□□ -1.43
VARS2-205ENST00000469358 TPRXLQ17RH7 258 aa6.06□□□□□ -1.44
VARS2-205ENST00000469358 KRTAP12-2P59991 146 aa6.03□□□□□ -1.44
VARS2-205ENST00000469358 RYR1P21817 5038 aa6.03□□□□□ -1.44
VARS2-205ENST00000469358 SPINT4Q6UDR6 99 aa6□□□□□ -1.45
VARS2-205ENST00000469358 ABCA13Q86UQ4 5058 aa5.96□□□□□ -1.45
VARS2-205ENST00000469358 MT1HL1P0DM35 61 aa5.96□□□□□ -1.46
VARS2-205ENST00000469358 KRTAP12-1P59990 96 aa5.92□□□□□ -1.46
VARS2-205ENST00000469358 EPPK1P58107 5090 aaKnown RBP5.92□□□□□ -1.46
VARS2-205ENST00000469358 M0QZ58 72 aa5.78□□□□□ -1.48
VARS2-205ENST00000469358 KRTAP4-5Q9BYR2 181 aa5.78□□□□□ -1.48
VARS2-205ENST00000469358 LORP23490 312 aaPredicted RBP5.76□□□□□ -1.49
VARS2-205ENST00000469358 NDUFAF8A1L188 74 aa5.75□□□□□ -1.49
VARS2-205ENST00000469358 KRTAP15-1Q3LI76 137 aa5.74□□□□□ -1.49
VARS2-205ENST00000469358 MUC2Q02817 5179 aa5.73□□□□□ -1.49
VARS2-205ENST00000469358 R4GN34 69 aa5.71□□□□□ -1.49
VARS2-205ENST00000469358 KRTAP4-1Q9BYQ7 146 aa5.68□□□□□ -1.5
VARS2-205ENST00000469358 MUC17Q685J3 4493 aa5.67□□□□□ -1.5
VARS2-205ENST00000469358 HERC2O95714 4834 aa5.58□□□□□ -1.52
VARS2-205ENST00000469358 SEC61BP60468 96 aaKnown RBP5.54□□□□□ -1.52
VARS2-205ENST00000469358 BIRC6Q9NR09 4857 aa5.5□□□□□ -1.53
VARS2-205ENST00000469358 KRTAP19-2Q3LHN2 52 aa5.48□□□□□ -1.53
VARS2-205ENST00000469358 J3QL48 77 aa5.48□□□□□ -1.53
VARS2-205ENST00000469358 CAMK2N1Q7Z7J9 78 aa5.46□□□□□ -1.53
VARS2-205ENST00000469358 PLAC4Q8WY50 150 aa5.46□□□□□ -1.54
VARS2-205ENST00000469358 PCLOQ9Y6V0 5065 aa5.44□□□□□ -1.54
VARS2-205ENST00000469358 FAT4Q6V0I7 4981 aa5.43□□□□□ -1.54
VARS2-205ENST00000469358 HERC1Q15751 4861 aa5.38□□□□□ -1.55
VARS2-205ENST00000469358 A0A0A0MQY5 61 aa5.36□□□□□ -1.55
VARS2-205ENST00000469358 FLGP20930 4061 aaPredicted RBP5.34□□□□□ -1.55
VARS2-205ENST00000469358 RNF213Q63HN8 5207 aa5.26□□□□□ -1.57
VARS2-205ENST00000469358 PP632Q6XCG6 107 aa5.22□□□□□ -1.57
VARS2-205ENST00000469358 HMCN2Q8NDA2 5059 aa5.22□□□□□ -1.57
VARS2-205ENST00000469358 LCE2DQ5TA82 110 aaPredicted RBP5.19□□□□□ -1.58
VARS2-205ENST00000469358 TNP1P09430 55 aa5.19□□□□□ -1.58
VARS2-205ENST00000469358 LUZP6Q538Z0 58 aa5.19□□□□□ -1.58
VARS2-205ENST00000469358 UBR4Q5T4S7 5183 aa5.15□□□□□ -1.58
VARS2-205ENST00000469358 LCE2CQ5TA81 110 aa5.13□□□□□ -1.59
VARS2-205ENST00000469358 M0R2T5 61 aa5.09□□□□□ -1.59
VARS2-205ENST00000469358 KRTAP19-1Q8IUB9 90 aa5.09□□□□□ -1.6
VARS2-205ENST00000469358 SPRR2GQ9BYE4 73 aa5.02□□□□□ -1.61
VARS2-205ENST00000469358 LCE3AQ5TA76 89 aa5.01□□□□□ -1.61
VARS2-205ENST00000469358 MT1FP04733 61 aa4.98□□□□□ -1.61
VARS2-205ENST00000469358 MT1HP80294 61 aa4.98□□□□□ -1.61
VARS2-205ENST00000469358 KRTAP10-10P60014 251 aa4.97□□□□□ -1.61
VARS2-205ENST00000469358 SPRR5A0A1B0GTR4 108 aa4.97□□□□□ -1.61
VARS2-205ENST00000469358 KRTAP23-1A1A580 65 aa4.94□□□□□ -1.62
VARS2-205ENST00000469358 MT2AP02795 61 aa4.94□□□□□ -1.62
VARS2-205ENST00000469358 KRTAP9-8Q9BYQ0 159 aa4.88□□□□□ -1.63
VARS2-205ENST00000469358 KRTAP10-5P60370 271 aa4.81□□□□□ -1.64
VARS2-205ENST00000469358 MT1BP07438 61 aa4.8□□□□□ -1.64
VARS2-205ENST00000469358 MT1XP80297 61 aa4.79□□□□□ -1.64
VARS2-205ENST00000469358 USH2AO75445 5202 aa4.78□□□□□ -1.64
VARS2-205ENST00000469358 KRTAP19-8Q3LI54 63 aa4.75□□□□□ -1.65
VARS2-205ENST00000469358 KRTAP8-1Q8IUC2 63 aa4.75□□□□□ -1.65
VARS2-205ENST00000469358 KMT2DO14686 5537 aa4.75□□□□□ -1.65
VARS2-205ENST00000469358 KRTAP10-7P60409 375 aaPredicted RBP4.74□□□□□ -1.65
VARS2-205ENST00000469358 KRTAP12-3P60328 96 aa4.71□□□□□ -1.66
VARS2-205ENST00000469358 KRTAP10-12P60413 245 aa4.71□□□□□ -1.66
VARS2-205ENST00000469358 KRTAP9-3Q9BYQ3 159 aa4.65□□□□□ -1.67
VARS2-205ENST00000469358 KRTAP19-5Q3LI72 72 aa4.53□□□□□ -1.68
VARS2-205ENST00000469358 LCE2BO14633 110 aa4.52□□□□□ -1.69
VARS2-205ENST00000469358 KRTAP4-8A0A0G2JLE6 195 aa4.5□□□□□ -1.69
VARS2-205ENST00000469358 KRTAP4-8Q9BYQ9 185 aa4.5□□□□□ -1.69
VARS2-205ENST00000469358 PRO2289Q9P1D8 64 aa4.47□□□□□ -1.69
VARS2-205ENST00000469358 LCE2AQ5TA79 106 aaPredicted RBP4.43□□□□□ -1.7
VARS2-205ENST00000469358 LCE3CQ5T5A8 94 aa4.42□□□□□ -1.7
VARS2-205ENST00000469358 KRTAP4-7Q9BYR0 210 aa4.4□□□□□ -1.71
VARS2-205ENST00000469358 FSIP2Q5CZC0 6907 aa4.4□□□□□ -1.71
VARS2-205ENST00000469358 KRTAP9-6A8MVA2 160 aa4.39□□□□□ -1.71
VARS2-205ENST00000469358 INE1O15225 51 aa4.38□□□□□ -1.71
VARS2-205ENST00000469358 KRTAP19-7Q3SYF9 63 aa4.27□□□□□ -1.73
VARS2-205ENST00000469358 SSPOA2VEC9 5147 aa4.2□□□□□ -1.74
VARS2-205ENST00000469358 MT1LQ93083 61 aa4.14□□□□□ -1.75
VARS2-205ENST00000469358 MUC12Q9UKN1 5478 aa4.12□□□□□ -1.75
VARS2-205ENST00000469358 KRTAP2-3P0C7H8 128 aa4.12□□□□□ -1.75
VARS2-205ENST00000469358 KRTAP2-4Q9BYR9 128 aa4.12□□□□□ -1.75
VARS2-205ENST00000469358 KRTAP2-1Q9BYU5 128 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms