RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 XP32Q5T750 250 aa4.67□□□□□ -1.66
SMARCE1-207ENST00000469334 KMT2CQ8NEZ4 4911 aaKnown RBP4.67□□□□□ -1.66
SMARCE1-207ENST00000469334 C9orf92A6NGG3 77 aa4.61□□□□□ -1.67
SMARCE1-207ENST00000469334 KRTAP12-2P59991 146 aa4.61□□□□□ -1.67
SMARCE1-207ENST00000469334 RYR3Q15413 4870 aa4.61□□□□□ -1.67
SMARCE1-207ENST00000469334 BIRC6Q9NR09 4857 aa4.59□□□□□ -1.67
SMARCE1-207ENST00000469334 DNAH6Q9C0G6 4158 aa4.59□□□□□ -1.67
SMARCE1-207ENST00000469334 KRTAP12-1P59990 96 aa4.58□□□□□ -1.68
SMARCE1-207ENST00000469334 PLECQ15149 4684 aaKnown RBP4.58□□□□□ -1.68
SMARCE1-207ENST00000469334 KRTAP10-2P60368 255 aa4.57□□□□□ -1.68
SMARCE1-207ENST00000469334 PCLOQ9Y6V0 5065 aa4.57□□□□□ -1.68
SMARCE1-207ENST00000469334 DNAH2Q9P225 4427 aa4.55□□□□□ -1.68
SMARCE1-207ENST00000469334 KRTAP10-1P60331 282 aa4.55□□□□□ -1.68
SMARCE1-207ENST00000469334 DNAH11Q96DT5 4516 aa4.54□□□□□ -1.68
SMARCE1-207ENST00000469334 KRTAP4-8A0A0G2JLE6 195 aa4.53□□□□□ -1.68
SMARCE1-207ENST00000469334 KMT2AQ03164 3969 aa4.53□□□□□ -1.68
SMARCE1-207ENST00000469334 PLAC4Q8WY50 150 aa4.52□□□□□ -1.69
SMARCE1-207ENST00000469334 M0QZ58 72 aa4.51□□□□□ -1.69
SMARCE1-207ENST00000469334 SACSQ9NZJ4 4579 aa4.5□□□□□ -1.69
SMARCE1-207ENST00000469334 LCE3BQ5TA77 95 aa4.49□□□□□ -1.69
SMARCE1-207ENST00000469334 LCE2AQ5TA79 106 aaPredicted RBP4.49□□□□□ -1.69
SMARCE1-207ENST00000469334 RYR2Q92736 4967 aa4.47□□□□□ -1.69
SMARCE1-207ENST00000469334 KRTAP9-9Q9BYP9 154 aa4.45□□□□□ -1.7
SMARCE1-207ENST00000469334 KRTAP9-4Q9BYQ2 154 aa4.45□□□□□ -1.7
SMARCE1-207ENST00000469334 STARD9Q9P2P6 4700 aa4.45□□□□□ -1.7
SMARCE1-207ENST00000469334 DMBT1Q9UGM3 2413 aaPredicted RBP4.44□□□□□ -1.7
SMARCE1-207ENST00000469334 EPPK1P58107 5090 aaKnown RBP4.43□□□□□ -1.7
SMARCE1-207ENST00000469334 DNAH5Q8TE73 4624 aa4.43□□□□□ -1.7
SMARCE1-207ENST00000469334 KRTAP4-7Q9BYR0 210 aa4.42□□□□□ -1.7
SMARCE1-207ENST00000469334 HYDINQ4G0P3 5121 aa4.39□□□□□ -1.71
SMARCE1-207ENST00000469334 LRP1BQ9NZR2 4599 aa4.39□□□□□ -1.71
SMARCE1-207ENST00000469334 VPS13BQ7Z7G8 4022 aa4.38□□□□□ -1.71
SMARCE1-207ENST00000469334 PP632Q6XCG6 107 aa4.37□□□□□ -1.71
SMARCE1-207ENST00000469334 UBR4Q5T4S7 5183 aa4.37□□□□□ -1.71
SMARCE1-207ENST00000469334 PKHD1L1Q86WI1 4243 aa4.36□□□□□ -1.71
SMARCE1-207ENST00000469334 KRTAP10-8P60410 259 aa4.36□□□□□ -1.71
SMARCE1-207ENST00000469334 PKD1P98161 4303 aa4.32□□□□□ -1.72
SMARCE1-207ENST00000469334 CAMK2N1Q7Z7J9 78 aa4.3□□□□□ -1.72
SMARCE1-207ENST00000469334 KRTAP4-12Q9BQ66 201 aa4.3□□□□□ -1.72
SMARCE1-207ENST00000469334 PKHD1P08F94 4074 aa4.29□□□□□ -1.72
SMARCE1-207ENST00000469334 RYR1P21817 5038 aa4.28□□□□□ -1.72
SMARCE1-207ENST00000469334 KRTAP5-3Q6L8H2 238 aa4.28□□□□□ -1.72
SMARCE1-207ENST00000469334 KRTAP10-4P60372 401 aaPredicted RBP4.27□□□□□ -1.73
SMARCE1-207ENST00000469334 KRTAP9-8Q9BYQ0 159 aa4.25□□□□□ -1.73
SMARCE1-207ENST00000469334 R4GN34 69 aa4.24□□□□□ -1.73
SMARCE1-207ENST00000469334 KRTAP4-2Q9BYR5 136 aa4.24□□□□□ -1.73
SMARCE1-207ENST00000469334 HERC2O95714 4834 aa4.23□□□□□ -1.73
SMARCE1-207ENST00000469334 SMR3BP02814 79 aaPredicted RBP4.22□□□□□ -1.73
SMARCE1-207ENST00000469334 LCE1DQ5T752 114 aa4.21□□□□□ -1.74
SMARCE1-207ENST00000469334 FAT2Q9NYQ8 4349 aa4.2□□□□□ -1.74
SMARCE1-207ENST00000469334 SPRR5A0A1B0GTR4 108 aa4.2□□□□□ -1.74
SMARCE1-207ENST00000469334 PRO2289Q9P1D8 64 aa4.19□□□□□ -1.74
SMARCE1-207ENST00000469334 KIAA1109Q2LD37 5005 aa4.19□□□□□ -1.74
SMARCE1-207ENST00000469334 LRP1Q07954 4544 aaKnown RBP4.19□□□□□ -1.74
SMARCE1-207ENST00000469334 APOBP04114 4563 aaKnown RBP4.18□□□□□ -1.74
SMARCE1-207ENST00000469334 KRTAP4-9Q9BYQ8 210 aa4.18□□□□□ -1.74
SMARCE1-207ENST00000469334 TNXBP22105 4242 aa4.17□□□□□ -1.74
SMARCE1-207ENST00000469334 KRTAP23-1A1A580 65 aa4.16□□□□□ -1.74
SMARCE1-207ENST00000469334 LORP23490 312 aaPredicted RBP4.14□□□□□ -1.75
SMARCE1-207ENST00000469334 DYNC1H1Q14204 4646 aaKnown RBP4.13□□□□□ -1.75
SMARCE1-207ENST00000469334 MYCBP2O75592 4640 aa4.12□□□□□ -1.75
SMARCE1-207ENST00000469334 ABCA13Q86UQ4 5058 aa4.12□□□□□ -1.75
SMARCE1-207ENST00000469334 LCE2CQ5TA81 110 aa4.1□□□□□ -1.75
SMARCE1-207ENST00000469334 INE1O15225 51 aa4.09□□□□□ -1.75
SMARCE1-207ENST00000469334 FAT3Q8TDW7 4589 aa4.09□□□□□ -1.75
SMARCE1-207ENST00000469334 HSPG2P98160 4391 aa4.09□□□□□ -1.75
SMARCE1-207ENST00000469334 A0A1B0GVY2 172 aa4.06□□□□□ -1.76
SMARCE1-207ENST00000469334 FAT1Q14517 4588 aa4.03□□□□□ -1.76
SMARCE1-207ENST00000469334 HERC1Q15751 4861 aa4.03□□□□□ -1.76
SMARCE1-207ENST00000469334 TNP1P09430 55 aa4.02□□□□□ -1.77
SMARCE1-207ENST00000469334 KRTAP19-1Q8IUB9 90 aa3.98□□□□□ -1.77
SMARCE1-207ENST00000469334 KRTAP4-5Q9BYR2 181 aa3.96□□□□□ -1.78
SMARCE1-207ENST00000469334 Q5VSD8 79 aa3.95□□□□□ -1.78
SMARCE1-207ENST00000469334 KRTAP4-11Q9BYQ6 195 aa3.91□□□□□ -1.78
SMARCE1-207ENST00000469334 MT1HL1P0DM35 61 aa3.86□□□□□ -1.79
SMARCE1-207ENST00000469334 MUC2Q02817 5179 aa3.83□□□□□ -1.8
SMARCE1-207ENST00000469334 HMCN2Q8NDA2 5059 aa3.8□□□□□ -1.8
SMARCE1-207ENST00000469334 KRTAP9-7A8MTY7 169 aa3.76□□□□□ -1.81
SMARCE1-207ENST00000469334 LPAP08519 4548 aa3.75□□□□□ -1.81
SMARCE1-207ENST00000469334 FLGP20930 4061 aaPredicted RBP3.75□□□□□ -1.81
SMARCE1-207ENST00000469334 KRTAP19-2Q3LHN2 52 aa3.72□□□□□ -1.81
SMARCE1-207ENST00000469334 LRP2P98164 4655 aa3.71□□□□□ -1.82
SMARCE1-207ENST00000469334 CRCT1Q9UGL9 99 aa3.7□□□□□ -1.82
SMARCE1-207ENST00000469334 LCE3AQ5TA76 89 aa3.69□□□□□ -1.82
SMARCE1-207ENST00000469334 RNF213Q63HN8 5207 aa3.69□□□□□ -1.82
SMARCE1-207ENST00000469334 KRTAP8-1Q8IUC2 63 aa3.67□□□□□ -1.82
SMARCE1-207ENST00000469334 KRTAP4-1Q9BYQ7 146 aa3.67□□□□□ -1.82
SMARCE1-207ENST00000469334 MUC17Q685J3 4493 aa3.66□□□□□ -1.82
SMARCE1-207ENST00000469334 SPRR2GQ9BYE4 73 aa3.6□□□□□ -1.83
SMARCE1-207ENST00000469334 FAT4Q6V0I7 4981 aa3.6□□□□□ -1.83
SMARCE1-207ENST00000469334 KRTAP10-12P60413 245 aa3.55□□□□□ -1.84
SMARCE1-207ENST00000469334 KRTAP10-10P60014 251 aa3.53□□□□□ -1.84
SMARCE1-207ENST00000469334 KRTAP12-3P60328 96 aa3.52□□□□□ -1.85
SMARCE1-207ENST00000469334 KRTAP10-5P60370 271 aa3.45□□□□□ -1.86
SMARCE1-207ENST00000469334 KRTAP19-8Q3LI54 63 aa3.38□□□□□ -1.87
SMARCE1-207ENST00000469334 LCE5AQ5TCM9 118 aa3.38□□□□□ -1.87
SMARCE1-207ENST00000469334 LCE3CQ5T5A8 94 aa3.35□□□□□ -1.87
SMARCE1-207ENST00000469334 MT1XP80297 61 aa3.34□□□□□ -1.87
SMARCE1-207ENST00000469334 GPR98Q8WXG9 6306 aa3.34□□□□□ -1.87
SMARCE1-207ENST00000469334 SSPOA2VEC9 5147 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 158.6 ms