RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 SPRR2AP35326 72 aa5.22□□□□□ -1.57
HDAC3-204ENST00000469207 CYP4F30PQ9H0H9 118 aa5.22□□□□□ -1.57
HDAC3-204ENST00000469207 CRIPTQ9P021 101 aa5.22□□□□□ -1.57
HDAC3-204ENST00000469207 SPCS1Q9Y6A9 102 aa5.22□□□□□ -1.57
HDAC3-204ENST00000469207 TP53AIP1Q9HCN2 124 aa5.21□□□□□ -1.58
HDAC3-204ENST00000469207 K7EP34 96 aa5.18□□□□□ -1.58
HDAC3-204ENST00000469207 PRO0461Q9UI25 63 aa5.18□□□□□ -1.58
HDAC3-204ENST00000469207 MT1XP80297 61 aa5.17□□□□□ -1.58
HDAC3-204ENST00000469207 KRTAP8-1Q8IUC2 63 aa5.13□□□□□ -1.59
HDAC3-204ENST00000469207 LCE1AQ5T7P2 110 aa5.12□□□□□ -1.59
HDAC3-204ENST00000469207 ADM2Q7Z4H4 148 aa5.12□□□□□ -1.59
HDAC3-204ENST00000469207 NDUFC1O43677 76 aa5.11□□□□□ -1.59
HDAC3-204ENST00000469207 H0YAA0 97 aa5.1□□□□□ -1.59
HDAC3-204ENST00000469207 KRTAP2-2Q9BYT5 123 aa5.1□□□□□ -1.59
HDAC3-204ENST00000469207 KRTAP2-1Q9BYU5 128 aa5.1□□□□□ -1.59
HDAC3-204ENST00000469207 TRAV22A0A0B4J277 110 aa5.09□□□□□ -1.59
HDAC3-204ENST00000469207 KRTAP4-8A0A0G2JLE6 195 aa5.09□□□□□ -1.59
HDAC3-204ENST00000469207 A8MUN3 132 aa5.09□□□□□ -1.59
HDAC3-204ENST00000469207 KRTAP4-8Q9BYQ9 185 aa5.09□□□□□ -1.59
HDAC3-204ENST00000469207 PRO2289Q9P1D8 64 aa5.09□□□□□ -1.59
HDAC3-204ENST00000469207 LOC101927531A0A1B0GV80 90 aa5.08□□□□□ -1.6
HDAC3-204ENST00000469207 PLAC4Q8WY50 150 aa5.06□□□□□ -1.6
HDAC3-204ENST00000469207 LOC105371267A0A1B0GV96 52 aa5.05□□□□□ -1.6
HDAC3-204ENST00000469207 SPRR2DP22532 72 aa5.04□□□□□ -1.6
HDAC3-204ENST00000469207 KRTAP12-2P59991 146 aa5.02□□□□□ -1.61
HDAC3-204ENST00000469207 ETDBQ3ZM63 59 aa5.02□□□□□ -1.61
HDAC3-204ENST00000469207 H0Y9P7 68 aa5.01□□□□□ -1.61
HDAC3-204ENST00000469207 ACYP1P07311 99 aa5.01□□□□□ -1.61
HDAC3-204ENST00000469207 COL5A1-AS1Q5SY13 56 aa5.01□□□□□ -1.61
HDAC3-204ENST00000469207 P0C880 135 aa5□□□□□ -1.61
HDAC3-204ENST00000469207 UQCRQO14949 82 aa4.97□□□□□ -1.61
HDAC3-204ENST00000469207 R4GN34 69 aa4.97□□□□□ -1.61
HDAC3-204ENST00000469207 F8W1H4 67 aa4.96□□□□□ -1.62
HDAC3-204ENST00000469207 KRTAP10-7P60409 375 aaPredicted RBP4.96□□□□□ -1.62
HDAC3-204ENST00000469207 HIST1H4AP62805 103 aaKnown RBP4.95□□□□□ -1.62
HDAC3-204ENST00000469207 M0QZ58 72 aa4.94□□□□□ -1.62
HDAC3-204ENST00000469207 ATOX1O00244 68 aa4.93□□□□□ -1.62
HDAC3-204ENST00000469207 LCE3BQ5TA77 95 aa4.93□□□□□ -1.62
HDAC3-204ENST00000469207 GTF2H5Q6ZYL4 71 aa4.93□□□□□ -1.62
HDAC3-204ENST00000469207 LINC00208Q96KT6 92 aa4.93□□□□□ -1.62
HDAC3-204ENST00000469207 LINC01554Q52M75 96 aa4.92□□□□□ -1.62
HDAC3-204ENST00000469207 KRTAP10-12P60413 245 aa4.87□□□□□ -1.63
HDAC3-204ENST00000469207 ATP5EP2Q5VTU8 51 aa4.83□□□□□ -1.64
HDAC3-204ENST00000469207 C20orf197Q8N268 126 aa4.83□□□□□ -1.64
HDAC3-204ENST00000469207 OCR1Q9BZK8 76 aa4.81□□□□□ -1.64
HDAC3-204ENST00000469207 MP68P56378 58 aa4.8□□□□□ -1.64
HDAC3-204ENST00000469207 FAM240AA0A1B0GVK7 77 aa4.79□□□□□ -1.64
HDAC3-204ENST00000469207 PCP4L1A6NKN8 68 aa4.78□□□□□ -1.64
HDAC3-204ENST00000469207 DMAC1Q96GE9 116 aa4.76□□□□□ -1.65
HDAC3-204ENST00000469207 LINC00643Q86TS7 51 aa4.74□□□□□ -1.65
HDAC3-204ENST00000469207 DSTQ03001 7570 aaKnown RBP4.73□□□□□ -1.65
HDAC3-204ENST00000469207 KRTAP4-9Q9BYQ8 210 aa4.72□□□□□ -1.65
HDAC3-204ENST00000469207 MT-ATP8P03928 68 aa4.71□□□□□ -1.66
HDAC3-204ENST00000469207 GPR98Q8WXG9 6306 aa4.67□□□□□ -1.66
HDAC3-204ENST00000469207 H3BPC8 53 aa4.66□□□□□ -1.66
HDAC3-204ENST00000469207 KRTAP19-7Q3SYF9 63 aa4.63□□□□□ -1.67
HDAC3-204ENST00000469207 LCE5AQ5TCM9 118 aa4.63□□□□□ -1.67
HDAC3-204ENST00000469207 TRAV7A0A075B6U4 112 aa4.62□□□□□ -1.67
HDAC3-204ENST00000469207 ACYP2P14621 99 aa4.6□□□□□ -1.67
HDAC3-204ENST00000469207 SCGB1A1P11684 91 aa4.59□□□□□ -1.67
HDAC3-204ENST00000469207 MT1EP04732 61 aa4.58□□□□□ -1.68
HDAC3-204ENST00000469207 KRTAP13-4Q3LI77 160 aa4.58□□□□□ -1.68
HDAC3-204ENST00000469207 KRTAP19-3Q7Z4W3 81 aa4.58□□□□□ -1.68
HDAC3-204ENST00000469207 LCE1DQ5T752 114 aa4.53□□□□□ -1.68
HDAC3-204ENST00000469207 CAMK2N1Q7Z7J9 78 aa4.53□□□□□ -1.68
HDAC3-204ENST00000469207 SPTSSBQ8NFR3 76 aa4.53□□□□□ -1.68
HDAC3-204ENST00000469207 PCP4P48539 62 aa4.52□□□□□ -1.69
HDAC3-204ENST00000469207 CHKB-CPT1BH3BT56 60 aa4.51□□□□□ -1.69
HDAC3-204ENST00000469207 CYSTM1Q9H1C7 97 aa4.49□□□□□ -1.69
HDAC3-204ENST00000469207 A0A1B0GV90 55 aa4.48□□□□□ -1.69
HDAC3-204ENST00000469207 MT4P47944 62 aa4.47□□□□□ -1.69
HDAC3-204ENST00000469207 KRTAP19-5Q3LI72 72 aa4.46□□□□□ -1.7
HDAC3-204ENST00000469207 HMCN1Q96RW7 5635 aa4.45□□□□□ -1.7
HDAC3-204ENST00000469207 A0A0D9SG42 100 aa4.44□□□□□ -1.7
HDAC3-204ENST00000469207 MT1GP13640 62 aa4.43□□□□□ -1.7
HDAC3-204ENST00000469207 SNURFQ9Y675 71 aa4.41□□□□□ -1.7
HDAC3-204ENST00000469207 LCE4AQ5TA78 99 aa4.4□□□□□ -1.71
HDAC3-204ENST00000469207 MT1MQ8N339 61 aa4.39□□□□□ -1.71
HDAC3-204ENST00000469207 AHNAK2Q8IVF2 5795 aa4.38□□□□□ -1.71
HDAC3-204ENST00000469207 J3QR89 54 aa4.38□□□□□ -1.71
HDAC3-204ENST00000469207 KRTAP4-3Q9BYR4 195 aa4.37□□□□□ -1.71
HDAC3-204ENST00000469207 SPATA8Q6RVD6 105 aa4.35□□□□□ -1.71
HDAC3-204ENST00000469207 PP632Q6XCG6 107 aa4.35□□□□□ -1.71
HDAC3-204ENST00000469207 SPINT4Q6UDR6 99 aa4.34□□□□□ -1.71
HDAC3-204ENST00000469207 MT1LQ93083 61 aa4.34□□□□□ -1.71
HDAC3-204ENST00000469207 KRTAP4-6Q9BYQ5 205 aa4.34□□□□□ -1.71
HDAC3-204ENST00000469207 KRTAP5-10Q6L8G5 202 aa4.32□□□□□ -1.72
HDAC3-204ENST00000469207 SMIM20Q8N5G0 67 aa4.32□□□□□ -1.72
HDAC3-204ENST00000469207 KRTAP5-4Q6L8H1 288 aa4.3□□□□□ -1.72
HDAC3-204ENST00000469207 SPANXA2-OT1Q8N9U9 137 aa4.29□□□□□ -1.72
HDAC3-204ENST00000469207 KRTAP12-1P59990 96 aa4.28□□□□□ -1.72
HDAC3-204ENST00000469207 COA5Q86WW8 74 aa4.24□□□□□ -1.73
HDAC3-204ENST00000469207 C10orf95Q9H7T3 257 aa4.24□□□□□ -1.73
HDAC3-204ENST00000469207 SERP1Q9Y6X1 66 aa4.24□□□□□ -1.73
HDAC3-204ENST00000469207 LCE3AQ5TA76 89 aa4.23□□□□□ -1.73
HDAC3-204ENST00000469207 A0A1B0GU33 70 aa4.22□□□□□ -1.73
HDAC3-204ENST00000469207 SEC61GP60059 68 aa4.21□□□□□ -1.74
HDAC3-204ENST00000469207 KRTAP4-7Q9BYR0 210 aa4.21□□□□□ -1.74
HDAC3-204ENST00000469207 KRTAP5-3Q6L8H2 238 aa4.17□□□□□ -1.74
HDAC3-204ENST00000469207 KRTAP5-7Q6L8G8 165 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms