RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 LUZP6Q538Z0 58 aa2.73□□□□□ -1.97
SF3B1-207ENST00000468925 MAPK1IP1LQ8NDC0 245 aa2.73□□□□□ -1.97
SF3B1-207ENST00000468925 NDUFAF8A1L188 74 aa2.72□□□□□ -1.97
SF3B1-207ENST00000468925 CRIPTQ9P021 101 aa2.72□□□□□ -1.97
SF3B1-207ENST00000468925 PSORS1C2Q9UIG4 136 aa2.72□□□□□ -1.97
SF3B1-207ENST00000468925 TRRAPQ9Y4A5 3859 aa2.72□□□□□ -1.97
SF3B1-207ENST00000468925 ANK3Q12955 4377 aaKnown RBP2.71□□□□□ -1.98
SF3B1-207ENST00000468925 RPL37P61927 97 aaKnown RBP2.71□□□□□ -1.98
SF3B1-207ENST00000468925 RYR2Q92736 4967 aa2.7□□□□□ -1.98
SF3B1-207ENST00000468925 VWFP04275 2813 aa2.69□□□□□ -1.98
SF3B1-207ENST00000468925 TENM2Q9NT68 2774 aa2.69□□□□□ -1.98
SF3B1-207ENST00000468925 SPINK6Q6UWN8 80 aa2.69□□□□□ -1.98
SF3B1-207ENST00000468925 CIRBP-AS1Q8TBR5 109 aa2.69□□□□□ -1.98
SF3B1-207ENST00000468925 UBR4Q5T4S7 5183 aa2.68□□□□□ -1.98
SF3B1-207ENST00000468925 HERC2O95714 4834 aa2.68□□□□□ -1.98
SF3B1-207ENST00000468925 KRTAP24-1Q3LI83 254 aa2.67□□□□□ -1.98
SF3B1-207ENST00000468925 SPACA4Q8TDM5 124 aa2.67□□□□□ -1.98
SF3B1-207ENST00000468925 SPINK1P00995 79 aa2.66□□□□□ -1.98
SF3B1-207ENST00000468925 TENM3Q9P273 2699 aa2.66□□□□□ -1.98
SF3B1-207ENST00000468925 KRTAP10-3P60369 221 aa2.65□□□□□ -1.99
SF3B1-207ENST00000468925 TYMSOSQ8TAI1 123 aa2.65□□□□□ -1.99
SF3B1-207ENST00000468925 NBDYA0A0U1RRE5 68 aa2.64□□□□□ -1.99
SF3B1-207ENST00000468925 RPS29P62273 56 aaKnown RBP2.63□□□□□ -1.99
SF3B1-207ENST00000468925 UBE2DNLQ8IWF7 75 aa2.62□□□□□ -1.99
SF3B1-207ENST00000468925 TPRXLQ17RH7 258 aa2.61□□□□□ -1.99
SF3B1-207ENST00000468925 COL7A1Q02388 2944 aa2.6□□□□□ -1.99
SF3B1-207ENST00000468925 CMYA5Q8N3K9 4069 aa2.59□□□□□ -1.99
SF3B1-207ENST00000468925 KRTAP10-12P60413 245 aa2.59□□□□□ -1.99
SF3B1-207ENST00000468925 LCE1FQ5T754 118 aa2.59□□□□□ -1.99
SF3B1-207ENST00000468925 ABCA13Q86UQ4 5058 aa2.59□□□□□ -2
SF3B1-207ENST00000468925 DNAH1Q9P2D7 4330 aa2.56□□□□□ -2
SF3B1-207ENST00000468925 PLAC4Q8WY50 150 aa2.56□□□□□ -2
SF3B1-207ENST00000468925 SACSQ9NZJ4 4579 aa2.56□□□□□ -2
SF3B1-207ENST00000468925 DYNC2H1Q8NCM8 4307 aaKnown RBP2.56□□□□□ -2
SF3B1-207ENST00000468925 APLNQ9ULZ1 77 aa2.55□□□□□ -2
SF3B1-207ENST00000468925 Q6ZRN7 208 aaPredicted RBP2.54□□□□□ -2
SF3B1-207ENST00000468925 HERC1Q15751 4861 aa2.54□□□□□ -2
SF3B1-207ENST00000468925 KIAA1109Q2LD37 5005 aa2.54□□□□□ -2
SF3B1-207ENST00000468925 STAB2Q8WWQ8 2551 aa2.53□□□□□ -2
SF3B1-207ENST00000468925 S4R3F8 94 aa2.53□□□□□ -2
SF3B1-207ENST00000468925 FLG2Q5D862 2391 aaPredicted RBP2.53□□□□□ -2
SF3B1-207ENST00000468925 M0QZ58 72 aa2.52□□□□□ -2.01
SF3B1-207ENST00000468925 PP632Q6XCG6 107 aa2.52□□□□□ -2.01
SF3B1-207ENST00000468925 LCE3CQ5T5A8 94 aa2.5□□□□□ -2.01
SF3B1-207ENST00000468925 LYSTQ99698 3801 aa2.48□□□□□ -2.01
SF3B1-207ENST00000468925 KRTAP13-2Q52LG2 175 aa2.48□□□□□ -2.01
SF3B1-207ENST00000468925 C10orf95Q9H7T3 257 aa2.48□□□□□ -2.01
SF3B1-207ENST00000468925 SRRM2Q9UQ35 2752 aaKnown RBP2.46□□□□□ -2.02
SF3B1-207ENST00000468925 FRAS1Q86XX4 4008 aa2.46□□□□□ -2.02
SF3B1-207ENST00000468925 A0A0D9SG42 100 aa2.46□□□□□ -2.02
SF3B1-207ENST00000468925 PRO2289Q9P1D8 64 aa2.46□□□□□ -2.02
SF3B1-207ENST00000468925 CSMD3Q7Z407 3707 aa2.45□□□□□ -2.02
SF3B1-207ENST00000468925 KRTAP5-8O75690 187 aa2.45□□□□□ -2.02
SF3B1-207ENST00000468925 DNAH3Q8TD57 4116 aa2.44□□□□□ -2.02
SF3B1-207ENST00000468925 INE1O15225 51 aa2.43□□□□□ -2.02
SF3B1-207ENST00000468925 KRTAP12-1P59990 96 aa2.43□□□□□ -2.02
SF3B1-207ENST00000468925 DNAH9Q9NYC9 4486 aa2.43□□□□□ -2.02
SF3B1-207ENST00000468925 VPS13DQ5THJ4 4388 aa2.42□□□□□ -2.02
SF3B1-207ENST00000468925 DNAH7Q8WXX0 4024 aa2.42□□□□□ -2.02
SF3B1-207ENST00000468925 HECTD4Q9Y4D8 3996 aa2.42□□□□□ -2.02
SF3B1-207ENST00000468925 KRTAP1-4P0C5Y4 121 aa2.42□□□□□ -2.02
SF3B1-207ENST00000468925 KRTAP12-2P59991 146 aa2.42□□□□□ -2.02
SF3B1-207ENST00000468925 KRTAP13-4Q3LI77 160 aa2.42□□□□□ -2.02
SF3B1-207ENST00000468925 STARD9Q9P2P6 4700 aa2.42□□□□□ -2.02
SF3B1-207ENST00000468925 A0A1B0GVY2 172 aa2.4□□□□□ -2.03
SF3B1-207ENST00000468925 PLECQ15149 4684 aaKnown RBP2.38□□□□□ -2.03
SF3B1-207ENST00000468925 DNAH8Q96JB1 4490 aa2.37□□□□□ -2.03
SF3B1-207ENST00000468925 DMBT1Q9UGM3 2413 aaPredicted RBP2.37□□□□□ -2.03
SF3B1-207ENST00000468925 R4GN34 69 aa2.36□□□□□ -2.03
SF3B1-207ENST00000468925 RNF213Q63HN8 5207 aa2.34□□□□□ -2.04
SF3B1-207ENST00000468925 PKHD1P08F94 4074 aa2.33□□□□□ -2.04
SF3B1-207ENST00000468925 DNAH10Q8IVF4 4471 aa2.33□□□□□ -2.04
SF3B1-207ENST00000468925 SPRR5A0A1B0GTR4 108 aa2.32□□□□□ -2.04
SF3B1-207ENST00000468925 C9orf92A6NGG3 77 aa2.32□□□□□ -2.04
SF3B1-207ENST00000468925 DNAH6Q9C0G6 4158 aa2.32□□□□□ -2.04
SF3B1-207ENST00000468925 HMCN2Q8NDA2 5059 aa2.32□□□□□ -2.04
SF3B1-207ENST00000468925 KMT2AQ03164 3969 aa2.31□□□□□ -2.04
SF3B1-207ENST00000468925 HUWE1Q7Z6Z7 4374 aaKnown RBP2.31□□□□□ -2.04
SF3B1-207ENST00000468925 MUC2Q02817 5179 aa2.31□□□□□ -2.04
SF3B1-207ENST00000468925 DNAH17Q9UFH2 4485 aa2.3□□□□□ -2.04
SF3B1-207ENST00000468925 LCE3AQ5TA76 89 aa2.3□□□□□ -2.04
SF3B1-207ENST00000468925 LCE3EQ5T5B0 92 aa2.28□□□□□ -2.04
SF3B1-207ENST00000468925 Q5VSD8 79 aa2.28□□□□□ -2.04
SF3B1-207ENST00000468925 HSPG2P98160 4391 aa2.28□□□□□ -2.05
SF3B1-207ENST00000468925 MYCBP2O75592 4640 aa2.27□□□□□ -2.05
SF3B1-207ENST00000468925 DYNC1H1Q14204 4646 aaKnown RBP2.27□□□□□ -2.05
SF3B1-207ENST00000468925 DNAH2Q9P225 4427 aa2.26□□□□□ -2.05
SF3B1-207ENST00000468925 FAT4Q6V0I7 4981 aa2.26□□□□□ -2.05
SF3B1-207ENST00000468925 KRTAP10-1P60331 282 aa2.25□□□□□ -2.05
SF3B1-207ENST00000468925 KRTAP10-8P60410 259 aa2.25□□□□□ -2.05
SF3B1-207ENST00000468925 DNAH11Q96DT5 4516 aa2.24□□□□□ -2.05
SF3B1-207ENST00000468925 FSIP2Q5CZC0 6907 aa2.24□□□□□ -2.05
SF3B1-207ENST00000468925 TNP1P09430 55 aa2.23□□□□□ -2.05
SF3B1-207ENST00000468925 APOBP04114 4563 aaKnown RBP2.21□□□□□ -2.06
SF3B1-207ENST00000468925 FAT2Q9NYQ8 4349 aa2.21□□□□□ -2.06
SF3B1-207ENST00000468925 KRTAP5-5Q701N2 237 aaPredicted RBP2.19□□□□□ -2.06
SF3B1-207ENST00000468925 PKHD1L1Q86WI1 4243 aa2.18□□□□□ -2.06
SF3B1-207ENST00000468925 PKD1P98161 4303 aa2.18□□□□□ -2.06
SF3B1-207ENST00000468925 VPS13BQ7Z7G8 4022 aa2.17□□□□□ -2.06
SF3B1-207ENST00000468925 LRP2P98164 4655 aa2.15□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms