RNA–Protein interactions for RNA: ENST00000468570.1

SGIP1-208, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 324 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-208ENST00000468570 NIPBLQ6KC79 2804 aaeCLIP0.19□□□□□ -2.38
SGIP1-208ENST00000468570 SSPOA2VEC9 5147 aa0.19□□□□□ -2.38
SGIP1-208ENST00000468570 TRPM2O94759 1503 aa0.19□□□□□ -2.38
SGIP1-208ENST00000468570 CSPG4Q6UVK1 2322 aa0.19□□□□□ -2.38
SGIP1-208ENST00000468570 COL7A1Q02388 2944 aa0.19□□□□□ -2.38
SGIP1-208ENST00000468570 DNAH3Q8TD57 4116 aa0.19□□□□□ -2.38
SGIP1-208ENST00000468570 PKD1P98161 4303 aa0.19□□□□□ -2.38
SGIP1-208ENST00000468570 LINC01546A6NGU7 62 aa0.19□□□□□ -2.38
SGIP1-208ENST00000468570 MRPL33O75394 65 aaKnown RBP0.19□□□□□ -2.38
SGIP1-208ENST00000468570 LINC00158P58513 81 aa0.19□□□□□ -2.38
SGIP1-208ENST00000468570 DEFB124Q8NES8 71 aa0.19□□□□□ -2.38
SGIP1-208ENST00000468570 FXYD6Q9H0Q3 95 aa0.19□□□□□ -2.38
SGIP1-208ENST00000468570 APLNQ9ULZ1 77 aa0.19□□□□□ -2.38
SGIP1-208ENST00000468570 LPAP08519 4548 aa0.19□□□□□ -2.38
SGIP1-208ENST00000468570 FREM2Q5SZK8 3169 aa0.19□□□□□ -2.38
SGIP1-208ENST00000468570 HMCN2Q8NDA2 5059 aa0.19□□□□□ -2.38
SGIP1-208ENST00000468570 TACC2O95359 2948 aa0.19□□□□□ -2.38
SGIP1-208ENST00000468570 LOC400499M0QZD8 3231 aa0.19□□□□□ -2.38
SGIP1-208ENST00000468570 RNF213Q63HN8 5207 aa0.19□□□□□ -2.38
SGIP1-208ENST00000468570 SPTBN1Q01082 2364 aaKnown RBP0.18□□□□□ -2.38
SGIP1-208ENST00000468570 ATMQ13315 3056 aa0.18□□□□□ -2.38
SGIP1-208ENST00000468570 ADGRG4Q8IZF6 3080 aa0.18□□□□□ -2.38
SGIP1-208ENST00000468570 COL12A1Q99715 3063 aa0.18□□□□□ -2.38
SGIP1-208ENST00000468570 SMR3BP02814 79 aaPredicted RBP0.18□□□□□ -2.38
SGIP1-208ENST00000468570 DEFB130BP0DP73 79 aa0.18□□□□□ -2.38
SGIP1-208ENST00000468570 DEFB130AP0DP74 79 aa0.18□□□□□ -2.38
SGIP1-208ENST00000468570 RPS27P42677 84 aaKnown RBP0.18□□□□□ -2.38
SGIP1-208ENST00000468570 RPS27LQ71UM5 84 aaKnown RBP0.18□□□□□ -2.38
SGIP1-208ENST00000468570 CMC2Q9NRP2 79 aa0.18□□□□□ -2.38
SGIP1-208ENST00000468570 SONP18583 2426 aaKnown RBP0.18□□□□□ -2.38
SGIP1-208ENST00000468570 SYNE1Q8NF91 8797 aaKnown RBP0.18□□□□□ -2.38
SGIP1-208ENST00000468570 LAMA5O15230 3695 aa0.18□□□□□ -2.38
SGIP1-208ENST00000468570 SVEP1Q4LDE5 3571 aa0.17□□□□□ -2.38
SGIP1-208ENST00000468570 PKDREJQ9NTG1 2253 aa0.17□□□□□ -2.38
SGIP1-208ENST00000468570 DMXL2Q8TDJ6 3036 aa0.17□□□□□ -2.38
SGIP1-208ENST00000468570 PRM1P04553 51 aa0.17□□□□□ -2.38
SGIP1-208ENST00000468570 IAPPP10997 89 aa0.17□□□□□ -2.38
SGIP1-208ENST00000468570 LAMA1P25391 3075 aa0.17□□□□□ -2.38
SGIP1-208ENST00000468570 FCER1GP30273 86 aa0.17□□□□□ -2.38
SGIP1-208ENST00000468570 MT4P47944 62 aa0.17□□□□□ -2.38
SGIP1-208ENST00000468570 ACACAQ13085 2346 aa0.17□□□□□ -2.38
SGIP1-208ENST00000468570 DEFB109BQ30KR1 87 aa0.17□□□□□ -2.38
SGIP1-208ENST00000468570 NMES1Q9C002 83 aa0.17□□□□□ -2.38
SGIP1-208ENST00000468570 U3KQA8 63 aa0.17□□□□□ -2.38
SGIP1-208ENST00000468570 HSPG2P98160 4391 aa0.17□□□□□ -2.38
SGIP1-208ENST00000468570 KNL1Q8NG31 2342 aa0.16□□□□□ -2.38
SGIP1-208ENST00000468570 TRIOO75962 3097 aa0.16□□□□□ -2.38
SGIP1-208ENST00000468570 FAT3Q8TDW7 4589 aa0.16□□□□□ -2.38
SGIP1-208ENST00000468570 USH2AO75445 5202 aa0.16□□□□□ -2.38
SGIP1-208ENST00000468570 MGAQ8IWI9 3026 aa0.16□□□□□ -2.38
SGIP1-208ENST00000468570 SMIM27A0A1W2PRY6 76 aa0.16□□□□□ -2.38
SGIP1-208ENST00000468570 SPRR2EP22531 72 aa0.16□□□□□ -2.38
SGIP1-208ENST00000468570 PLNP26678 52 aa0.16□□□□□ -2.38
SGIP1-208ENST00000468570 SPRR2BP35325 72 aa0.16□□□□□ -2.38
SGIP1-208ENST00000468570 SPRR2AP35326 72 aa0.16□□□□□ -2.38
SGIP1-208ENST00000468570 KRTAP19-6Q3LI70 58 aa0.16□□□□□ -2.38
SGIP1-208ENST00000468570 HRNRQ86YZ3 2850 aaPredicted RBP0.16□□□□□ -2.38
SGIP1-208ENST00000468570 SRRM2Q9UQ35 2752 aaKnown RBP0.16□□□□□ -2.38
SGIP1-208ENST00000468570 DNAH7Q8WXX0 4024 aa0.16□□□□□ -2.38
SGIP1-208ENST00000468570 APOBP04114 4563 aaKnown RBP0.15□□□□□ -2.38
SGIP1-208ENST00000468570 DNAH6Q9C0G6 4158 aa0.15□□□□□ -2.38
SGIP1-208ENST00000468570 WNK2Q9Y3S1 2297 aa0.15□□□□□ -2.39
SGIP1-208ENST00000468570 SPINK4O60575 86 aa0.15□□□□□ -2.39
SGIP1-208ENST00000468570 SPRR2DP22532 72 aa0.15□□□□□ -2.39
SGIP1-208ENST00000468570 SERF2P84101 59 aa0.15□□□□□ -2.39
SGIP1-208ENST00000468570 PKHD1P08F94 4074 aa0.15□□□□□ -2.39
SGIP1-208ENST00000468570 FLGP20930 4061 aaPredicted RBP0.15□□□□□ -2.39
SGIP1-208ENST00000468570 ANK3Q12955 4377 aaKnown RBP0.14□□□□□ -2.39
SGIP1-208ENST00000468570 AKAP6Q13023 2319 aa0.14□□□□□ -2.39
SGIP1-208ENST00000468570 TRRAPQ9Y4A5 3859 aa0.14□□□□□ -2.39
SGIP1-208ENST00000468570 STARD9Q9P2P6 4700 aa0.14□□□□□ -2.39
SGIP1-208ENST00000468570 H0YGX0 51 aa0.14□□□□□ -2.39
SGIP1-208ENST00000468570 WT1-ASQ06250 92 aa0.14□□□□□ -2.39
SGIP1-208ENST00000468570 MINOS1Q5TGZ0 78 aa0.14□□□□□ -2.39
SGIP1-208ENST00000468570 LINC00308Q8TCZ7 52 aa0.14□□□□□ -2.39
SGIP1-208ENST00000468570 TMEM167BQ9NRX6 74 aa0.14□□□□□ -2.39
SGIP1-208ENST00000468570 C6orf48Q9UBA6 75 aa0.14□□□□□ -2.39
SGIP1-208ENST00000468570 S4R3F8 94 aa0.14□□□□□ -2.39
SGIP1-208ENST00000468570 AKAP9Q99996 3911 aa0.14□□□□□ -2.39
SGIP1-208ENST00000468570 DYNC2H1Q8NCM8 4307 aaKnown RBP0.13□□□□□ -2.39
SGIP1-208ENST00000468570 VPS13DQ5THJ4 4388 aa0.13□□□□□ -2.39
SGIP1-208ENST00000468570 M0R2T5 61 aa0.13□□□□□ -2.39
SGIP1-208ENST00000468570 SPRR2FQ96RM1 72 aa0.13□□□□□ -2.39
SGIP1-208ENST00000468570 ABRACLQ9P1F3 81 aa0.13□□□□□ -2.39
SGIP1-208ENST00000468570 DNAH2Q9P225 4427 aa0.13□□□□□ -2.39
SGIP1-208ENST00000468570 LRP1BQ9NZR2 4599 aa0.13□□□□□ -2.39
SGIP1-208ENST00000468570 DNAH8Q96JB1 4490 aa0.12□□□□□ -2.39
SGIP1-208ENST00000468570 PRLHP81277 87 aa0.12□□□□□ -2.39
SGIP1-208ENST00000468570 PLECQ15149 4684 aaKnown RBP0.12□□□□□ -2.39
SGIP1-208ENST00000468570 TOMM5Q8N4H5 51 aa0.12□□□□□ -2.39
SGIP1-208ENST00000468570 MUC12Q9UKN1 5478 aa0.12□□□□□ -2.39
SGIP1-208ENST00000468570 LRP2P98164 4655 aa0.11□□□□□ -2.39
SGIP1-208ENST00000468570 DNAH9Q9NYC9 4486 aa0.11□□□□□ -2.39
SGIP1-208ENST00000468570 DYNC1H1Q14204 4646 aaKnown RBP0.11□□□□□ -2.39
SGIP1-208ENST00000468570 TFF3Q07654 80 aa0.11□□□□□ -2.39
SGIP1-208ENST00000468570 DNAH1Q9P2D7 4330 aa0.11□□□□□ -2.39
SGIP1-208ENST00000468570 CMYA5Q8N3K9 4069 aa0.1□□□□□ -2.39
SGIP1-208ENST00000468570 MMP24-AS1A0A0U1RRL7 71 aa0.1□□□□□ -2.39
SGIP1-208ENST00000468570 DEFB135Q30KP9 77 aa0.1□□□□□ -2.39
SGIP1-208ENST00000468570 DEFB106AQ8N104 65 aa0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms