RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 MYMXA0A1B0GTQ4 84 aa2.88□□□□□ -1.95
PTCD3-207ENST00000467273 A0A1B0GU33 70 aa2.88□□□□□ -1.95
PTCD3-207ENST00000467273 F8WEM9 126 aa2.88□□□□□ -1.95
PTCD3-207ENST00000467273 IGKV2D-28P01615 120 aa2.88□□□□□ -1.95
PTCD3-207ENST00000467273 IFI27P40305 119 aaPredicted RBP2.88□□□□□ -1.95
PTCD3-207ENST00000467273 DEFB116Q30KQ4 102 aa2.88□□□□□ -1.95
PTCD3-207ENST00000467273 KRTAP6-3Q3LI67 103 aa2.88□□□□□ -1.95
PTCD3-207ENST00000467273 SSBP3-AS1Q7Z2R9 100 aa2.88□□□□□ -1.95
PTCD3-207ENST00000467273 BAGE3Q86Y29 109 aa2.88□□□□□ -1.95
PTCD3-207ENST00000467273 TOMM7Q9P0U1 55 aa2.88□□□□□ -1.95
PTCD3-207ENST00000467273 GNG13Q9P2W3 67 aa2.88□□□□□ -1.95
PTCD3-207ENST00000467273 TRAV23DV6A0A075B6W5 121 aa2.87□□□□□ -1.95
PTCD3-207ENST00000467273 CHKB-CPT1BH3BT56 60 aa2.87□□□□□ -1.95
PTCD3-207ENST00000467273 SFTA2Q6UW10 78 aa2.87□□□□□ -1.95
PTCD3-207ENST00000467273 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.87□□□□□ -1.95
PTCD3-207ENST00000467273 HIGD2AQ9BW72 106 aa2.87□□□□□ -1.95
PTCD3-207ENST00000467273 LINC00483Q53H64 154 aa2.86□□□□□ -1.95
PTCD3-207ENST00000467273 Q6JHZ5 121 aa2.86□□□□□ -1.95
PTCD3-207ENST00000467273 ST20-AS1Q8NBB2 130 aa2.86□□□□□ -1.95
PTCD3-207ENST00000467273 IFI27L1Q96BM0 104 aa2.86□□□□□ -1.95
PTCD3-207ENST00000467273 SMIM2Q9BVW6 85 aa2.86□□□□□ -1.95
PTCD3-207ENST00000467273 A8MU10 97 aa2.85□□□□□ -1.95
PTCD3-207ENST00000467273 HIGD1CA8MV81 97 aa2.85□□□□□ -1.95
PTCD3-207ENST00000467273 TRAV12-1A0A0B4J245 112 aa2.84□□□□□ -1.95
PTCD3-207ENST00000467273 A0A1W2PNM2 257 aa2.84□□□□□ -1.95
PTCD3-207ENST00000467273 ZNF815PA8K554 130 aa2.84□□□□□ -1.95
PTCD3-207ENST00000467273 LCE1CQ5T751 118 aa2.84□□□□□ -1.95
PTCD3-207ENST00000467273 LCE1BQ5T7P3 118 aa2.84□□□□□ -1.95
PTCD3-207ENST00000467273 AMELXQ99217 191 aa2.84□□□□□ -1.95
PTCD3-207ENST00000467273 LOC101927531A0A1B0GV80 90 aa2.83□□□□□ -1.96
PTCD3-207ENST00000467273 KRTAP5-8O75690 187 aa2.83□□□□□ -1.96
PTCD3-207ENST00000467273 COX17Q14061 63 aa2.82□□□□□ -1.96
PTCD3-207ENST00000467273 KRTAP19-6Q3LI70 58 aa2.82□□□□□ -1.96
PTCD3-207ENST00000467273 CDKN2A-AS1Q9UH64 79 aa2.82□□□□□ -1.96
PTCD3-207ENST00000467273 MACF1Q9UPN3 7388 aaKnown RBP2.82□□□□□ -1.96
PTCD3-207ENST00000467273 IGLV6-57P01721 117 aa2.81□□□□□ -1.96
PTCD3-207ENST00000467273 RPL37P61927 97 aaKnown RBP2.81□□□□□ -1.96
PTCD3-207ENST00000467273 KRTAP25-1Q3LHN0 102 aa2.81□□□□□ -1.96
PTCD3-207ENST00000467273 ATP5EP2Q5VTU8 51 aa2.81□□□□□ -1.96
PTCD3-207ENST00000467273 CSAG1Q6PB30 78 aa2.81□□□□□ -1.96
PTCD3-207ENST00000467273 COX7B2Q8TF08 81 aa2.81□□□□□ -1.96
PTCD3-207ENST00000467273 C9orf92A6NGG3 77 aa2.8□□□□□ -1.96
PTCD3-207ENST00000467273 K7EMI3 77 aa2.8□□□□□ -1.96
PTCD3-207ENST00000467273 SPRR1AP35321 89 aa2.8□□□□□ -1.96
PTCD3-207ENST00000467273 IGIPA6NJ69 53 aa2.79□□□□□ -1.96
PTCD3-207ENST00000467273 D6R8Y8 96 aa2.79□□□□□ -1.96
PTCD3-207ENST00000467273 ELOF1P60002 83 aaKnown RBP2.79□□□□□ -1.96
PTCD3-207ENST00000467273 KRTAP20-1Q3LI63 56 aa2.79□□□□□ -1.96
PTCD3-207ENST00000467273 ETDCA0A1B0GVM5 59 aa2.78□□□□□ -1.96
PTCD3-207ENST00000467273 LEPROTL1O95214 131 aa2.78□□□□□ -1.96
PTCD3-207ENST00000467273 MT2AP02795 61 aa2.78□□□□□ -1.96
PTCD3-207ENST00000467273 ATXN8Q156A1 80 aa2.78□□□□□ -1.96
PTCD3-207ENST00000467273 DMAC1Q96GE9 116 aa2.78□□□□□ -1.96
PTCD3-207ENST00000467273 KCNQ1DNQ9H478 68 aa2.78□□□□□ -1.96
PTCD3-207ENST00000467273 V9GYV3 84 aa2.78□□□□□ -1.96
PTCD3-207ENST00000467273 SYNE2Q8WXH0 6885 aaKnown RBP2.78□□□□□ -1.96
PTCD3-207ENST00000467273 SMIM27A0A1W2PRY6 76 aa2.76□□□□□ -1.97
PTCD3-207ENST00000467273 LINC01549A6NIU2 74 aa2.76□□□□□ -1.97
PTCD3-207ENST00000467273 MUSTN1Q8IVN3 82 aa2.75□□□□□ -1.97
PTCD3-207ENST00000467273 MT1FP04733 61 aa2.74□□□□□ -1.97
PTCD3-207ENST00000467273 KRTAP10-10P60014 251 aa2.74□□□□□ -1.97
PTCD3-207ENST00000467273 PRR15LQ9BU68 103 aa2.74□□□□□ -1.97
PTCD3-207ENST00000467273 ORMDL1Q9P0S3 153 aa2.74□□□□□ -1.97
PTCD3-207ENST00000467273 TRBV7-4A0A0J9YYF1 115 aa2.73□□□□□ -1.97
PTCD3-207ENST00000467273 Q6ZRX8 168 aa2.73□□□□□ -1.97
PTCD3-207ENST00000467273 Q9BRP9 147 aa2.73□□□□□ -1.97
PTCD3-207ENST00000467273 PRO2289Q9P1D8 64 aa2.72□□□□□ -1.97
PTCD3-207ENST00000467273 SNURFQ9Y675 71 aa2.72□□□□□ -1.97
PTCD3-207ENST00000467273 R4GN34 69 aa2.71□□□□□ -1.98
PTCD3-207ENST00000467273 SPRR1BP22528 89 aa2.7□□□□□ -1.98
PTCD3-207ENST00000467273 SPINT4Q6UDR6 99 aa2.7□□□□□ -1.98
PTCD3-207ENST00000467273 ZNF625Q96I27 306 aaPredicted RBP2.7□□□□□ -1.98
PTCD3-207ENST00000467273 LINC00158P58513 81 aa2.69□□□□□ -1.98
PTCD3-207ENST00000467273 A0A087WVE0 104 aa2.68□□□□□ -1.98
PTCD3-207ENST00000467273 NCR3O14931 201 aa2.68□□□□□ -1.98
PTCD3-207ENST00000467273 LINC01558Q9Y6Z2 57 aa2.67□□□□□ -1.98
PTCD3-207ENST00000467273 MUC12Q9UKN1 5478 aa2.66□□□□□ -1.98
PTCD3-207ENST00000467273 IGKV3D-7A0A0C4DH55 119 aa2.66□□□□□ -1.98
PTCD3-207ENST00000467273 LINC01546A6NGU7 62 aa2.66□□□□□ -1.98
PTCD3-207ENST00000467273 KRTAP2-3P0C7H8 128 aa2.66□□□□□ -1.98
PTCD3-207ENST00000467273 Q8N9L7 120 aa2.66□□□□□ -1.98
PTCD3-207ENST00000467273 KRTAP2-4Q9BYR9 128 aa2.66□□□□□ -1.98
PTCD3-207ENST00000467273 PDE6GP18545 87 aa2.65□□□□□ -1.99
PTCD3-207ENST00000467273 NEBP20929 6669 aa2.64□□□□□ -1.99
PTCD3-207ENST00000467273 DNAL4O96015 105 aa2.63□□□□□ -1.99
PTCD3-207ENST00000467273 HRES1P13985 223 aa2.63□□□□□ -1.99
PTCD3-207ENST00000467273 JMJD7-PLA2G4BH0Y9G9 81 aa2.62□□□□□ -1.99
PTCD3-207ENST00000467273 UQCR11O14957 56 aa2.62□□□□□ -1.99
PTCD3-207ENST00000467273 OBSCN-AS1Q96MR7 158 aa2.62□□□□□ -1.99
PTCD3-207ENST00000467273 A0A0G2JQZ4 141 aa2.61□□□□□ -1.99
PTCD3-207ENST00000467273 NDUFB1O75438 58 aa2.61□□□□□ -1.99
PTCD3-207ENST00000467273 NREPQ16612 68 aa2.61□□□□□ -1.99
PTCD3-207ENST00000467273 H0Y9P7 68 aa2.59□□□□□ -1.99
PTCD3-207ENST00000467273 Q96NJ1 140 aa2.59□□□□□ -1.99
PTCD3-207ENST00000467273 IGLV5-48A0A075B6I7 105 aa2.58□□□□□ -2
PTCD3-207ENST00000467273 SPINK7P58062 85 aa2.58□□□□□ -2
PTCD3-207ENST00000467273 SPATA8Q6RVD6 105 aa2.58□□□□□ -2
PTCD3-207ENST00000467273 IGFL1Q6UW32 110 aa2.58□□□□□ -2
PTCD3-207ENST00000467273 LINC00208Q96KT6 92 aa2.58□□□□□ -2
PTCD3-207ENST00000467273 MDN1Q9NU22 5596 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms