RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 PLAC4Q8WY50 150 aa1.52□□□□□ -2.17
CCDC58-203ENST00000466854 KRTAP4-1Q9BYQ7 146 aa1.52□□□□□ -2.17
CCDC58-203ENST00000466854 LRP1Q07954 4544 aaKnown RBP1.52□□□□□ -2.17
CCDC58-203ENST00000466854 TNXBP22105 4242 aa1.52□□□□□ -2.17
CCDC58-203ENST00000466854 H3BUX3 64 aa1.51□□□□□ -2.17
CCDC58-203ENST00000466854 ARL14EPLP0DKL9 152 aa1.51□□□□□ -2.17
CCDC58-203ENST00000466854 PLNP26678 52 aa1.51□□□□□ -2.17
CCDC58-203ENST00000466854 SMIM11BQ8TCY0 68 aa1.51□□□□□ -2.17
CCDC58-203ENST00000466854 FAT3Q8TDW7 4589 aa1.51□□□□□ -2.17
CCDC58-203ENST00000466854 NCR3O14931 201 aa1.49□□□□□ -2.17
CCDC58-203ENST00000466854 MRPL33O75394 65 aaKnown RBP1.49□□□□□ -2.17
CCDC58-203ENST00000466854 UNQ6190/PRO20217Q6UXQ8 127 aa1.49□□□□□ -2.17
CCDC58-203ENST00000466854 CPSF4LA6NMK7 179 aaKnown RBP1.48□□□□□ -2.17
CCDC58-203ENST00000466854 SERF2P84101 59 aa1.48□□□□□ -2.17
CCDC58-203ENST00000466854 ETDCA0A1B0GVM5 59 aa1.47□□□□□ -2.17
CCDC58-203ENST00000466854 RPL37P61927 97 aaKnown RBP1.47□□□□□ -2.17
CCDC58-203ENST00000466854 DEFB136Q30KP8 78 aa1.47□□□□□ -2.17
CCDC58-203ENST00000466854 KRTAP6-3Q3LI67 103 aa1.47□□□□□ -2.17
CCDC58-203ENST00000466854 SSBP3-AS1Q7Z2R9 100 aa1.47□□□□□ -2.17
CCDC58-203ENST00000466854 FCGBPQ9Y6R7 5405 aaPredicted RBP1.46□□□□□ -2.18
CCDC58-203ENST00000466854 SNRPGP62308 76 aaKnown RBP1.46□□□□□ -2.18
CCDC58-203ENST00000466854 HAMPP81172 84 aa1.46□□□□□ -2.18
CCDC58-203ENST00000466854 H3BSH0 61 aa1.45□□□□□ -2.18
CCDC58-203ENST00000466854 PRB3Q04118 309 aaPredicted RBP1.45□□□□□ -2.18
CCDC58-203ENST00000466854 APLNQ9ULZ1 77 aa1.45□□□□□ -2.18
CCDC58-203ENST00000466854 SPINK4O60575 86 aa1.44□□□□□ -2.18
CCDC58-203ENST00000466854 ANGP03950 147 aaKnown RBP1.44□□□□□ -2.18
CCDC58-203ENST00000466854 PCOTHQ58A44 107 aa1.44□□□□□ -2.18
CCDC58-203ENST00000466854 LINC00575Q6W349 94 aa1.44□□□□□ -2.18
CCDC58-203ENST00000466854 DEFB104AQ8WTQ1 72 aa1.44□□□□□ -2.18
CCDC58-203ENST00000466854 DEFB131BA0A096LNP1 70 aa1.43□□□□□ -2.18
CCDC58-203ENST00000466854 SMR3BP02814 79 aaPredicted RBP1.43□□□□□ -2.18
CCDC58-203ENST00000466854 CRIP1P50238 77 aa1.43□□□□□ -2.18
CCDC58-203ENST00000466854 LPAP08519 4548 aa1.42□□□□□ -2.18
CCDC58-203ENST00000466854 I3L2K1 104 aa1.42□□□□□ -2.18
CCDC58-203ENST00000466854 SPINK13Q1W4C9 94 aa1.42□□□□□ -2.18
CCDC58-203ENST00000466854 CRIPTQ9P021 101 aa1.41□□□□□ -2.18
CCDC58-203ENST00000466854 MACF1Q9UPN3 7388 aaKnown RBP1.4□□□□□ -2.19
CCDC58-203ENST00000466854 MT1HL1P0DM35 61 aa1.4□□□□□ -2.19
CCDC58-203ENST00000466854 UBE2DNLQ8IWF7 75 aa1.4□□□□□ -2.19
CCDC58-203ENST00000466854 KAAG1Q9UBP8 84 aa1.4□□□□□ -2.19
CCDC58-203ENST00000466854 H0YGX0 51 aa1.39□□□□□ -2.19
CCDC58-203ENST00000466854 NDUFA3O95167 84 aa1.39□□□□□ -2.19
CCDC58-203ENST00000466854 DEFB135Q30KP9 77 aa1.39□□□□□ -2.19
CCDC58-203ENST00000466854 DNAH8Q96JB1 4490 aa1.39□□□□□ -2.19
CCDC58-203ENST00000466854 TIMM8BQ9Y5J9 83 aaPredicted RBP1.38□□□□□ -2.19
CCDC58-203ENST00000466854 KRTAP10-4P60372 401 aaPredicted RBP1.37□□□□□ -2.19
CCDC58-203ENST00000466854 RPL38P63173 70 aaKnown RBP1.37□□□□□ -2.19
CCDC58-203ENST00000466854 MINOS1Q5TGZ0 78 aa1.37□□□□□ -2.19
CCDC58-203ENST00000466854 CDKN2A-AS1Q9UH64 79 aa1.37□□□□□ -2.19
CCDC58-203ENST00000466854 K7EQZ3 153 aa1.36□□□□□ -2.19
CCDC58-203ENST00000466854 LINC00158P58513 81 aa1.36□□□□□ -2.19
CCDC58-203ENST00000466854 KRTAP12-1P59990 96 aa1.36□□□□□ -2.19
CCDC58-203ENST00000466854 Q8IZM0 81 aa1.36□□□□□ -2.19
CCDC58-203ENST00000466854 SYNE2Q8WXH0 6885 aaKnown RBP1.35□□□□□ -2.19
CCDC58-203ENST00000466854 SSPOA2VEC9 5147 aa1.35□□□□□ -2.19
CCDC58-203ENST00000466854 H0YAA0 97 aa1.35□□□□□ -2.19
CCDC58-203ENST00000466854 FXYD6P3P58550 94 aa1.35□□□□□ -2.19
CCDC58-203ENST00000466854 C10orf95Q9H7T3 257 aa1.35□□□□□ -2.19
CCDC58-203ENST00000466854 DEFB4AO15263 64 aa1.34□□□□□ -2.19
CCDC58-203ENST00000466854 KRTAP20-1Q3LI63 56 aa1.34□□□□□ -2.19
CCDC58-203ENST00000466854 NEBP20929 6669 aa1.33□□□□□ -2.2
CCDC58-203ENST00000466854 MRPL34Q9BQ48 92 aaKnown RBP1.33□□□□□ -2.2
CCDC58-203ENST00000466854 Q6ZSA8 131 aa1.32□□□□□ -2.2
CCDC58-203ENST00000466854 LINC00308Q8TCZ7 52 aa1.32□□□□□ -2.2
CCDC58-203ENST00000466854 TP53AIP1Q9HCN2 124 aa1.32□□□□□ -2.2
CCDC58-203ENST00000466854 COX6A2Q02221 97 aa1.31□□□□□ -2.2
CCDC58-203ENST00000466854 COX6B2Q6YFQ2 88 aa1.3□□□□□ -2.2
CCDC58-203ENST00000466854 TMEM167BQ9NRX6 74 aa1.3□□□□□ -2.2
CCDC58-203ENST00000466854 RPS27LQ71UM5 84 aaKnown RBP1.29□□□□□ -2.2
CCDC58-203ENST00000466854 CNFNQ9BYD5 112 aa1.29□□□□□ -2.2
CCDC58-203ENST00000466854 GPR98Q8WXG9 6306 aa1.29□□□□□ -2.2
CCDC58-203ENST00000466854 MUC17Q685J3 4493 aa1.27□□□□□ -2.21
CCDC58-203ENST00000466854 NDUFA1O15239 70 aa1.27□□□□□ -2.21
CCDC58-203ENST00000466854 HTN3P15516 51 aa1.27□□□□□ -2.21
CCDC58-203ENST00000466854 SMIM2Q9BVW6 85 aa1.27□□□□□ -2.21
CCDC58-203ENST00000466854 USH2AO75445 5202 aa1.26□□□□□ -2.21
CCDC58-203ENST00000466854 H3BUA1 57 aa1.26□□□□□ -2.21
CCDC58-203ENST00000466854 USMG5Q96IX5 58 aa1.26□□□□□ -2.21
CCDC58-203ENST00000466854 SPART-AS1P0CW21 52 aa1.25□□□□□ -2.21
CCDC58-203ENST00000466854 PIGYQ3MUY2 71 aa1.25□□□□□ -2.21
CCDC58-203ENST00000466854 LEAP2Q969E1 77 aa1.25□□□□□ -2.21
CCDC58-203ENST00000466854 RPS27P42677 84 aaKnown RBP1.24□□□□□ -2.21
CCDC58-203ENST00000466854 SPRR1AP35321 89 aa1.23□□□□□ -2.21
CCDC58-203ENST00000466854 AHNAK2Q8IVF2 5795 aa1.22□□□□□ -2.21
CCDC58-203ENST00000466854 MT1HP80294 61 aa1.22□□□□□ -2.21
CCDC58-203ENST00000466854 C6orf48Q9UBA6 75 aa1.22□□□□□ -2.21
CCDC58-203ENST00000466854 FLGP20930 4061 aaPredicted RBP1.21□□□□□ -2.22
CCDC58-203ENST00000466854 MUC12Q9UKN1 5478 aa1.21□□□□□ -2.22
CCDC58-203ENST00000466854 KRTAP2-3P0C7H8 128 aa1.2□□□□□ -2.22
CCDC58-203ENST00000466854 DEFB130BP0DP73 79 aa1.2□□□□□ -2.22
CCDC58-203ENST00000466854 DEFB130AP0DP74 79 aa1.2□□□□□ -2.22
CCDC58-203ENST00000466854 DEFB131AP59861 70 aa1.2□□□□□ -2.22
CCDC58-203ENST00000466854 H1FX-AS1Q4G0G2 97 aa1.2□□□□□ -2.22
CCDC58-203ENST00000466854 KRTAP2-4Q9BYR9 128 aa1.2□□□□□ -2.22
CCDC58-203ENST00000466854 PRO0255Q9UI72 69 aa1.2□□□□□ -2.22
CCDC58-203ENST00000466854 APELAP0DMC3 54 aa1.19□□□□□ -2.22
CCDC58-203ENST00000466854 IAPPP10997 89 aa1.19□□□□□ -2.22
CCDC58-203ENST00000466854 A0A0D9SG42 100 aa1.18□□□□□ -2.22
CCDC58-203ENST00000466854 H3BNG1 76 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 157.1 ms