RNA–Protein interactions for RNA: ENST00000466233.1

CHD3-207, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 4

Gene CHD3, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-207ENST00000466233 TRAV22A0A0B4J277 110 aa5.87□□□□□ -1.47
CHD3-207ENST00000466233 LOC105371267A0A1B0GV96 52 aa5.87□□□□□ -1.47
CHD3-207ENST00000466233 F8W1H4 67 aa5.85□□□□□ -1.47
CHD3-207ENST00000466233 KMT2DO14686 5537 aa5.84□□□□□ -1.47
CHD3-207ENST00000466233 NDUFC1O43677 76 aa5.83□□□□□ -1.48
CHD3-207ENST00000466233 GTF2H5Q6ZYL4 71 aa5.83□□□□□ -1.48
CHD3-207ENST00000466233 A0A087WVE0 104 aa5.8□□□□□ -1.48
CHD3-207ENST00000466233 A8MUN3 132 aa5.8□□□□□ -1.48
CHD3-207ENST00000466233 ATOX1O00244 68 aa5.8□□□□□ -1.48
CHD3-207ENST00000466233 PRO2289Q9P1D8 64 aa5.8□□□□□ -1.48
CHD3-207ENST00000466233 MDN1Q9NU22 5596 aa5.79□□□□□ -1.48
CHD3-207ENST00000466233 UQCRQO14949 82 aa5.79□□□□□ -1.48
CHD3-207ENST00000466233 ACYP1P07311 99 aa5.78□□□□□ -1.48
CHD3-207ENST00000466233 ETDBQ3ZM63 59 aa5.77□□□□□ -1.49
CHD3-207ENST00000466233 ATP5EP2Q5VTU8 51 aa5.77□□□□□ -1.49
CHD3-207ENST00000466233 KRTAP2-3P0C7H8 128 aa5.76□□□□□ -1.49
CHD3-207ENST00000466233 KRTAP2-4Q9BYR9 128 aa5.76□□□□□ -1.49
CHD3-207ENST00000466233 FAM240AA0A1B0GVK7 77 aa5.73□□□□□ -1.49
CHD3-207ENST00000466233 H0Y9P7 68 aa5.71□□□□□ -1.5
CHD3-207ENST00000466233 ADM2Q7Z4H4 148 aa5.71□□□□□ -1.5
CHD3-207ENST00000466233 MT1XP80297 61 aa5.69□□□□□ -1.5
CHD3-207ENST00000466233 PLAC4Q8WY50 150 aa5.69□□□□□ -1.5
CHD3-207ENST00000466233 KRTAP12-2P59991 146 aa5.68□□□□□ -1.5
CHD3-207ENST00000466233 SPRR2FQ96RM1 72 aa5.68□□□□□ -1.5
CHD3-207ENST00000466233 HIST1H4AP62805 103 aaKnown RBP5.65□□□□□ -1.5
CHD3-207ENST00000466233 C20orf197Q8N268 126 aa5.65□□□□□ -1.5
CHD3-207ENST00000466233 SPRR2EP22531 72 aa5.64□□□□□ -1.51
CHD3-207ENST00000466233 SPRR2BP35325 72 aa5.64□□□□□ -1.51
CHD3-207ENST00000466233 SPRR2AP35326 72 aa5.64□□□□□ -1.51
CHD3-207ENST00000466233 KRTAP8-1Q8IUC2 63 aa5.63□□□□□ -1.51
CHD3-207ENST00000466233 R4GN34 69 aa5.62□□□□□ -1.51
CHD3-207ENST00000466233 LINC00208Q96KT6 92 aa5.6□□□□□ -1.51
CHD3-207ENST00000466233 MP68P56378 58 aa5.59□□□□□ -1.51
CHD3-207ENST00000466233 LCE1AQ5T7P2 110 aa5.58□□□□□ -1.52
CHD3-207ENST00000466233 LINC00643Q86TS7 51 aa5.58□□□□□ -1.52
CHD3-207ENST00000466233 KRTAP2-2Q9BYT5 123 aa5.57□□□□□ -1.52
CHD3-207ENST00000466233 KRTAP2-1Q9BYU5 128 aa5.57□□□□□ -1.52
CHD3-207ENST00000466233 OCR1Q9BZK8 76 aa5.56□□□□□ -1.52
CHD3-207ENST00000466233 H3BPC8 53 aa5.55□□□□□ -1.52
CHD3-207ENST00000466233 P0C880 135 aa5.53□□□□□ -1.52
CHD3-207ENST00000466233 M0QZ58 72 aa5.52□□□□□ -1.53
CHD3-207ENST00000466233 DMAC1Q96GE9 116 aa5.51□□□□□ -1.53
CHD3-207ENST00000466233 SPRR2DP22532 72 aa5.46□□□□□ -1.54
CHD3-207ENST00000466233 KRTAP4-8A0A0G2JLE6 195 aa5.45□□□□□ -1.54
CHD3-207ENST00000466233 PCP4L1A6NKN8 68 aa5.45□□□□□ -1.54
CHD3-207ENST00000466233 KRTAP4-8Q9BYQ9 185 aa5.45□□□□□ -1.54
CHD3-207ENST00000466233 KRTAP10-12P60413 245 aa5.44□□□□□ -1.54
CHD3-207ENST00000466233 TRAV7A0A075B6U4 112 aa5.43□□□□□ -1.54
CHD3-207ENST00000466233 LOC100996750A0A140TA64 210 aa5.4□□□□□ -1.54
CHD3-207ENST00000466233 LINC01554Q52M75 96 aa5.4□□□□□ -1.54
CHD3-207ENST00000466233 KRTAP4-6Q9BYQ5 205 aa5.4□□□□□ -1.54
CHD3-207ENST00000466233 KRTAP10-7P60409 375 aaPredicted RBP5.38□□□□□ -1.55
CHD3-207ENST00000466233 SPTSSBQ8NFR3 76 aa5.36□□□□□ -1.55
CHD3-207ENST00000466233 ACYP2P14621 99 aa5.35□□□□□ -1.55
CHD3-207ENST00000466233 SCGB1A1P11684 91 aa5.34□□□□□ -1.55
CHD3-207ENST00000466233 LCE3BQ5TA77 95 aa5.34□□□□□ -1.55
CHD3-207ENST00000466233 J3QR89 54 aa5.31□□□□□ -1.56
CHD3-207ENST00000466233 MT-ATP8P03928 68 aa5.31□□□□□ -1.56
CHD3-207ENST00000466233 SMIM20Q8N5G0 67 aa5.24□□□□□ -1.57
CHD3-207ENST00000466233 GPR98Q8WXG9 6306 aa5.24□□□□□ -1.57
CHD3-207ENST00000466233 CHKB-CPT1BH3BT56 60 aa5.19□□□□□ -1.58
CHD3-207ENST00000466233 A0A1B0GV90 55 aa5.17□□□□□ -1.58
CHD3-207ENST00000466233 LCE5AQ5TCM9 118 aa5.14□□□□□ -1.59
CHD3-207ENST00000466233 SPANXA2-OT1Q8N9U9 137 aa5.12□□□□□ -1.59
CHD3-207ENST00000466233 CAMK2N1Q7Z7J9 78 aa5.11□□□□□ -1.59
CHD3-207ENST00000466233 KRTAP19-7Q3SYF9 63 aa5.1□□□□□ -1.59
CHD3-207ENST00000466233 DSTQ03001 7570 aaKnown RBP5.08□□□□□ -1.6
CHD3-207ENST00000466233 KRTAP19-3Q7Z4W3 81 aa5.08□□□□□ -1.6
CHD3-207ENST00000466233 KRTAP13-4Q3LI77 160 aa5.07□□□□□ -1.6
CHD3-207ENST00000466233 MT1EP04732 61 aa5.06□□□□□ -1.6
CHD3-207ENST00000466233 SNURFQ9Y675 71 aa5□□□□□ -1.61
CHD3-207ENST00000466233 K7ERU9 68 aa4.98□□□□□ -1.61
CHD3-207ENST00000466233 MT1GP13640 62 aa4.98□□□□□ -1.61
CHD3-207ENST00000466233 SEC61GP60059 68 aa4.95□□□□□ -1.62
CHD3-207ENST00000466233 KRTAP4-9Q9BYQ8 210 aa4.95□□□□□ -1.62
CHD3-207ENST00000466233 CYSTM1Q9H1C7 97 aa4.95□□□□□ -1.62
CHD3-207ENST00000466233 PP632Q6XCG6 107 aa4.94□□□□□ -1.62
CHD3-207ENST00000466233 A0A0D9SG42 100 aa4.93□□□□□ -1.62
CHD3-207ENST00000466233 SERP2Q8N6R1 65 aa4.93□□□□□ -1.62
CHD3-207ENST00000466233 SERP1Q9Y6X1 66 aa4.93□□□□□ -1.62
CHD3-207ENST00000466233 LCE4AQ5TA78 99 aa4.9□□□□□ -1.63
CHD3-207ENST00000466233 COA5Q86WW8 74 aa4.89□□□□□ -1.63
CHD3-207ENST00000466233 KRTAP19-5Q3LI72 72 aa4.88□□□□□ -1.63
CHD3-207ENST00000466233 LCE1DQ5T752 114 aa4.87□□□□□ -1.63
CHD3-207ENST00000466233 A0A1B0GU33 70 aa4.86□□□□□ -1.63
CHD3-207ENST00000466233 KRTAP12-1P59990 96 aa4.84□□□□□ -1.63
CHD3-207ENST00000466233 SPINT4Q6UDR6 99 aa4.84□□□□□ -1.63
CHD3-207ENST00000466233 SPATA8Q6RVD6 105 aa4.83□□□□□ -1.64
CHD3-207ENST00000466233 MT1MQ8N339 61 aa4.82□□□□□ -1.64
CHD3-207ENST00000466233 MT1LQ93083 61 aa4.8□□□□□ -1.64
CHD3-207ENST00000466233 KRTAP5-4Q6L8H1 288 aa4.77□□□□□ -1.65
CHD3-207ENST00000466233 KRTAP4-12Q9BQ66 201 aa4.77□□□□□ -1.65
CHD3-207ENST00000466233 SMIM26A0A096LP01 95 aa4.76□□□□□ -1.65
CHD3-207ENST00000466233 HMCN1Q96RW7 5635 aa4.76□□□□□ -1.65
CHD3-207ENST00000466233 MT4P47944 62 aa4.74□□□□□ -1.65
CHD3-207ENST00000466233 TNP1P09430 55 aa4.71□□□□□ -1.66
CHD3-207ENST00000466233 COX7CP15954 63 aa4.7□□□□□ -1.66
CHD3-207ENST00000466233 H7BZZ5 65 aa4.68□□□□□ -1.66
CHD3-207ENST00000466233 C10orf95Q9H7T3 257 aa4.68□□□□□ -1.66
CHD3-207ENST00000466233 A0A1B0GU69 56 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms