RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 C14orf132Q9NPU4 83 aa4.5□□□□□ -1.69
USP39-212ENST00000465514 SPRR2EP22531 72 aa4.49□□□□□ -1.69
USP39-212ENST00000465514 SPRR2BP35325 72 aa4.49□□□□□ -1.69
USP39-212ENST00000465514 SPRR2AP35326 72 aa4.49□□□□□ -1.69
USP39-212ENST00000465514 NDUFS5O43920 106 aa4.48□□□□□ -1.69
USP39-212ENST00000465514 IGKV2D-30A0A075B6S6 120 aa4.47□□□□□ -1.69
USP39-212ENST00000465514 hDV103S1A0JD37 113 aa4.47□□□□□ -1.69
USP39-212ENST00000465514 IGKV2-30P06310 120 aa4.47□□□□□ -1.69
USP39-212ENST00000465514 K7EQZ3 153 aa4.46□□□□□ -1.7
USP39-212ENST00000465514 KRTAP23-1A1A580 65 aa4.45□□□□□ -1.7
USP39-212ENST00000465514 Q5W150 140 aa4.45□□□□□ -1.7
USP39-212ENST00000465514 SCGB1A1P11684 91 aa4.44□□□□□ -1.7
USP39-212ENST00000465514 KRTAP15-1Q3LI76 137 aa4.44□□□□□ -1.7
USP39-212ENST00000465514 C7orf65Q6ZTY9 151 aa4.44□□□□□ -1.7
USP39-212ENST00000465514 KRTAP10-5P60370 271 aa4.43□□□□□ -1.7
USP39-212ENST00000465514 MT1BP07438 61 aa4.42□□□□□ -1.7
USP39-212ENST00000465514 C4orf26Q17RF5 130 aa4.42□□□□□ -1.7
USP39-212ENST00000465514 SPRR2FQ96RM1 72 aa4.42□□□□□ -1.7
USP39-212ENST00000465514 C5orf47Q569G3 176 aa4.4□□□□□ -1.71
USP39-212ENST00000465514 FAM236AA0A1B0GUQ0 79 aa4.39□□□□□ -1.71
USP39-212ENST00000465514 FAM236BA0A1B0GV22 79 aa4.39□□□□□ -1.71
USP39-212ENST00000465514 BPY2O14599 106 aa4.39□□□□□ -1.71
USP39-212ENST00000465514 FAM240AA0A1B0GVK7 77 aa4.38□□□□□ -1.71
USP39-212ENST00000465514 HCG22E2RYF7 251 aa4.37□□□□□ -1.71
USP39-212ENST00000465514 ACYP1P07311 99 aa4.37□□□□□ -1.71
USP39-212ENST00000465514 Q5VV11 94 aa4.37□□□□□ -1.71
USP39-212ENST00000465514 CASC2Q6XLA1 102 aa4.37□□□□□ -1.71
USP39-212ENST00000465514 Q8N9L7 120 aa4.37□□□□□ -1.71
USP39-212ENST00000465514 SPRR2DP22532 72 aa4.35□□□□□ -1.71
USP39-212ENST00000465514 KRTAP19-8Q3LI54 63 aa4.35□□□□□ -1.71
USP39-212ENST00000465514 LCE1AQ5T7P2 110 aa4.35□□□□□ -1.71
USP39-212ENST00000465514 CXCL6P80162 114 aa4.34□□□□□ -1.71
USP39-212ENST00000465514 SPRR2GQ9BYE4 73 aa4.34□□□□□ -1.71
USP39-212ENST00000465514 S4R3F8 94 aa4.34□□□□□ -1.71
USP39-212ENST00000465514 CSAG1Q6PB30 78 aa4.33□□□□□ -1.72
USP39-212ENST00000465514 UBL5Q9BZL1 73 aa4.32□□□□□ -1.72
USP39-212ENST00000465514 LCA10Q71F78 164 aa4.31□□□□□ -1.72
USP39-212ENST00000465514 C1orf64Q8NEQ6 169 aa4.31□□□□□ -1.72
USP39-212ENST00000465514 LINC00643Q86TS7 51 aa4.28□□□□□ -1.72
USP39-212ENST00000465514 KLKP1Q107X0 134 aa4.27□□□□□ -1.73
USP39-212ENST00000465514 ATP5EP2Q5VTU8 51 aa4.27□□□□□ -1.73
USP39-212ENST00000465514 IMUPQ9GZP8 106 aa4.24□□□□□ -1.73
USP39-212ENST00000465514 MT-ATP8P03928 68 aa4.23□□□□□ -1.73
USP39-212ENST00000465514 ANAPC13Q9BS18 74 aa4.22□□□□□ -1.73
USP39-212ENST00000465514 KRTAP8-1Q8IUC2 63 aa4.21□□□□□ -1.74
USP39-212ENST00000465514 TP53AIP1Q9HCN2 124 aa4.21□□□□□ -1.74
USP39-212ENST00000465514 DSTQ03001 7570 aaKnown RBP4.21□□□□□ -1.74
USP39-212ENST00000465514 CRIPTQ9P021 101 aa4.2□□□□□ -1.74
USP39-212ENST00000465514 HIST1H4AP62805 103 aaKnown RBP4.19□□□□□ -1.74
USP39-212ENST00000465514 A0A087WVE0 104 aa4.18□□□□□ -1.74
USP39-212ENST00000465514 CYP4F30PQ9H0H9 118 aa4.17□□□□□ -1.74
USP39-212ENST00000465514 LOC101927531A0A1B0GV80 90 aa4.1□□□□□ -1.75
USP39-212ENST00000465514 SVIPQ8NHG7 77 aa4.1□□□□□ -1.75
USP39-212ENST00000465514 TRAV22A0A0B4J277 110 aa4.09□□□□□ -1.75
USP39-212ENST00000465514 H0YAA0 97 aa4.09□□□□□ -1.75
USP39-212ENST00000465514 NDUFC1O43677 76 aa4.09□□□□□ -1.75
USP39-212ENST00000465514 ATOX1O00244 68 aa4.08□□□□□ -1.76
USP39-212ENST00000465514 UQCRQO14949 82 aa4.07□□□□□ -1.76
USP39-212ENST00000465514 MT1XP80297 61 aa4.07□□□□□ -1.76
USP39-212ENST00000465514 ADM2Q7Z4H4 148 aa4.07□□□□□ -1.76
USP39-212ENST00000465514 PRO2289Q9P1D8 64 aa4.07□□□□□ -1.76
USP39-212ENST00000465514 A8MUN3 132 aa4.06□□□□□ -1.76
USP39-212ENST00000465514 CCDC179H3BU77 68 aa4.06□□□□□ -1.76
USP39-212ENST00000465514 OCR1Q9BZK8 76 aa4.06□□□□□ -1.76
USP39-212ENST00000465514 AHNAK2Q8IVF2 5795 aa4.04□□□□□ -1.76
USP39-212ENST00000465514 SMIM20Q8N5G0 67 aa4.04□□□□□ -1.76
USP39-212ENST00000465514 HMCN1Q96RW7 5635 aa4.04□□□□□ -1.76
USP39-212ENST00000465514 COX7CP15954 63 aa4.03□□□□□ -1.76
USP39-212ENST00000465514 PLAC4Q8WY50 150 aa4.03□□□□□ -1.76
USP39-212ENST00000465514 TRAV7A0A075B6U4 112 aa4.02□□□□□ -1.77
USP39-212ENST00000465514 H0Y9P7 68 aa4.02□□□□□ -1.77
USP39-212ENST00000465514 SERP2Q8N6R1 65 aa4.01□□□□□ -1.77
USP39-212ENST00000465514 KRTAP12-2P59991 146 aa4□□□□□ -1.77
USP39-212ENST00000465514 TMEM258P61165 79 aa3.99□□□□□ -1.77
USP39-212ENST00000465514 RPS28P62857 69 aaKnown RBP3.97□□□□□ -1.77
USP39-212ENST00000465514 R4GN34 69 aa3.97□□□□□ -1.77
USP39-212ENST00000465514 H3BPC8 53 aa3.96□□□□□ -1.78
USP39-212ENST00000465514 MP68P56378 58 aa3.96□□□□□ -1.78
USP39-212ENST00000465514 KRTAP5-10Q6L8G5 202 aa3.96□□□□□ -1.78
USP39-212ENST00000465514 P0C880 135 aa3.95□□□□□ -1.78
USP39-212ENST00000465514 LINC00208Q96KT6 92 aa3.95□□□□□ -1.78
USP39-212ENST00000465514 C20orf197Q8N268 126 aa3.94□□□□□ -1.78
USP39-212ENST00000465514 M0QZ58 72 aa3.93□□□□□ -1.78
USP39-212ENST00000465514 SNURFQ9Y675 71 aa3.92□□□□□ -1.78
USP39-212ENST00000465514 ATP5EP56381 51 aaPredicted RBP3.91□□□□□ -1.78
USP39-212ENST00000465514 LINC01554Q52M75 96 aa3.89□□□□□ -1.79
USP39-212ENST00000465514 CYSTM1Q9H1C7 97 aa3.89□□□□□ -1.79
USP39-212ENST00000465514 KRTAP10-7P60409 375 aaPredicted RBP3.88□□□□□ -1.79
USP39-212ENST00000465514 KRTAP5-7Q6L8G8 165 aa3.87□□□□□ -1.79
USP39-212ENST00000465514 SERP1Q9Y6X1 66 aa3.87□□□□□ -1.79
USP39-212ENST00000465514 MT4P47944 62 aa3.86□□□□□ -1.79
USP39-212ENST00000465514 KRTAP10-12P60413 245 aa3.86□□□□□ -1.79
USP39-212ENST00000465514 H7BZZ5 65 aa3.85□□□□□ -1.79
USP39-212ENST00000465514 DMAC1Q96GE9 116 aa3.83□□□□□ -1.8
USP39-212ENST00000465514 SPANXA2-OT1Q8N9U9 137 aa3.82□□□□□ -1.8
USP39-212ENST00000465514 SMIM26A0A096LP01 95 aa3.81□□□□□ -1.8
USP39-212ENST00000465514 SPRR5A0A1B0GTR4 108 aa3.81□□□□□ -1.8
USP39-212ENST00000465514 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.76□□□□□ -1.81
USP39-212ENST00000465514 ACYP2P14621 99 aa3.72□□□□□ -1.81
USP39-212ENST00000465514 PRO0628Q9UI54 55 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms