RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 NEBP20929 6669 aa9.23□□□□□ -0.93
CSPG5-204ENST00000465441 HIST1H4AP62805 103 aaKnown RBP9.22□□□□□ -0.93
CSPG5-204ENST00000465441 LINC00643Q86TS7 51 aa9.22□□□□□ -0.93
CSPG5-204ENST00000465441 TRAV22A0A0B4J277 110 aa9.21□□□□□ -0.94
CSPG5-204ENST00000465441 CYP4F30PQ9H0H9 118 aa9.18□□□□□ -0.94
CSPG5-204ENST00000465441 A0A087WVE0 104 aa9.16□□□□□ -0.94
CSPG5-204ENST00000465441 LOC101927531A0A1B0GV80 90 aa9.14□□□□□ -0.95
CSPG5-204ENST00000465441 UQCRQO14949 82 aa9.13□□□□□ -0.95
CSPG5-204ENST00000465441 CRIPTQ9P021 101 aa9.1□□□□□ -0.95
CSPG5-204ENST00000465441 ATOX1O00244 68 aa9.08□□□□□ -0.96
CSPG5-204ENST00000465441 J3QR89 54 aa9.07□□□□□ -0.96
CSPG5-204ENST00000465441 KRTAP5-9P26371 169 aa9.07□□□□□ -0.96
CSPG5-204ENST00000465441 H0Y9P7 68 aa9.06□□□□□ -0.96
CSPG5-204ENST00000465441 IMUPQ9GZP8 106 aa9.05□□□□□ -0.96
CSPG5-204ENST00000465441 KRTAP20-1Q3LI63 56 aa9.03□□□□□ -0.96
CSPG5-204ENST00000465441 OCR1Q9BZK8 76 aa8.99□□□□□ -0.97
CSPG5-204ENST00000465441 KMT2DO14686 5537 aa8.97□□□□□ -0.97
CSPG5-204ENST00000465441 NDUFC1O43677 76 aa8.95□□□□□ -0.98
CSPG5-204ENST00000465441 MDN1Q9NU22 5596 aa8.94□□□□□ -0.98
CSPG5-204ENST00000465441 H0YAA0 97 aa8.94□□□□□ -0.98
CSPG5-204ENST00000465441 LINC00208Q96KT6 92 aa8.92□□□□□ -0.98
CSPG5-204ENST00000465441 MP68P56378 58 aa8.9□□□□□ -0.98
CSPG5-204ENST00000465441 A8MUN3 132 aa8.86□□□□□ -0.99
CSPG5-204ENST00000465441 ADM2Q7Z4H4 148 aa8.86□□□□□ -0.99
CSPG5-204ENST00000465441 H3BPC8 53 aa8.83□□□□□ -1
CSPG5-204ENST00000465441 K7ERU9 68 aa8.79□□□□□ -1
CSPG5-204ENST00000465441 SCGB1A1P11684 91 aa8.79□□□□□ -1
CSPG5-204ENST00000465441 MT1XP80297 61 aa8.76□□□□□ -1.01
CSPG5-204ENST00000465441 PRO2289Q9P1D8 64 aa8.76□□□□□ -1.01
CSPG5-204ENST00000465441 KRTAP2-3P0C7H8 128 aa8.75□□□□□ -1.01
CSPG5-204ENST00000465441 SPRR2FQ96RM1 72 aa8.75□□□□□ -1.01
CSPG5-204ENST00000465441 KRTAP2-4Q9BYR9 128 aa8.75□□□□□ -1.01
CSPG5-204ENST00000465441 MT-ATP8P03928 68 aa8.74□□□□□ -1.01
CSPG5-204ENST00000465441 PLAC4Q8WY50 150 aa8.72□□□□□ -1.01
CSPG5-204ENST00000465441 SPRR2EP22531 72 aa8.68□□□□□ -1.02
CSPG5-204ENST00000465441 SPRR2BP35325 72 aa8.68□□□□□ -1.02
CSPG5-204ENST00000465441 SPRR2AP35326 72 aa8.68□□□□□ -1.02
CSPG5-204ENST00000465441 DMAC1Q96GE9 116 aa8.66□□□□□ -1.02
CSPG5-204ENST00000465441 SMIM20Q8N5G0 67 aa8.64□□□□□ -1.03
CSPG5-204ENST00000465441 R4GN34 69 aa8.64□□□□□ -1.03
CSPG5-204ENST00000465441 P0C880 135 aa8.63□□□□□ -1.03
CSPG5-204ENST00000465441 KRTAP8-1Q8IUC2 63 aa8.63□□□□□ -1.03
CSPG5-204ENST00000465441 TRAV7A0A075B6U4 112 aa8.62□□□□□ -1.03
CSPG5-204ENST00000465441 KRTAP12-2P59991 146 aa8.59□□□□□ -1.03
CSPG5-204ENST00000465441 M0QZ58 72 aa8.56□□□□□ -1.04
CSPG5-204ENST00000465441 C20orf197Q8N268 126 aa8.55□□□□□ -1.04
CSPG5-204ENST00000465441 LCE1AQ5T7P2 110 aa8.54□□□□□ -1.04
CSPG5-204ENST00000465441 KRTAP3-2Q9BYR7 98 aa8.52□□□□□ -1.05
CSPG5-204ENST00000465441 KRTAP4-8A0A0G2JLE6 195 aa8.51□□□□□ -1.05
CSPG5-204ENST00000465441 KRTAP4-8Q9BYQ9 185 aa8.51□□□□□ -1.05
CSPG5-204ENST00000465441 KRTAP2-2Q9BYT5 123 aa8.47□□□□□ -1.05
CSPG5-204ENST00000465441 KRTAP2-1Q9BYU5 128 aa8.47□□□□□ -1.05
CSPG5-204ENST00000465441 LINC01554Q52M75 96 aa8.46□□□□□ -1.06
CSPG5-204ENST00000465441 ACYP2P14621 99 aa8.44□□□□□ -1.06
CSPG5-204ENST00000465441 SNURFQ9Y675 71 aa8.4□□□□□ -1.06
CSPG5-204ENST00000465441 SPRR2DP22532 72 aa8.39□□□□□ -1.07
CSPG5-204ENST00000465441 KRTAP10-7P60409 375 aaPredicted RBP8.38□□□□□ -1.07
CSPG5-204ENST00000465441 SERP2Q8N6R1 65 aa8.38□□□□□ -1.07
CSPG5-204ENST00000465441 KRTAP10-12P60413 245 aa8.33□□□□□ -1.08
CSPG5-204ENST00000465441 SPANXA2-OT1Q8N9U9 137 aa8.33□□□□□ -1.08
CSPG5-204ENST00000465441 SPTSSBQ8NFR3 76 aa8.32□□□□□ -1.08
CSPG5-204ENST00000465441 CHKB-CPT1BH3BT56 60 aa8.26□□□□□ -1.09
CSPG5-204ENST00000465441 LCE3BQ5TA77 95 aa8.2□□□□□ -1.1
CSPG5-204ENST00000465441 COX7CP15954 63 aa8.15□□□□□ -1.1
CSPG5-204ENST00000465441 COA5Q86WW8 74 aa8.06□□□□□ -1.12
CSPG5-204ENST00000465441 H7BZZ5 65 aa8.02□□□□□ -1.13
CSPG5-204ENST00000465441 CYSTM1Q9H1C7 97 aa8.01□□□□□ -1.13
CSPG5-204ENST00000465441 KRTAP13-4Q3LI77 160 aa7.96□□□□□ -1.14
CSPG5-204ENST00000465441 ANAPC13Q9BS18 74 aa7.92□□□□□ -1.14
CSPG5-204ENST00000465441 CAMK2N1Q7Z7J9 78 aa7.9□□□□□ -1.14
CSPG5-204ENST00000465441 KRTAP19-7Q3SYF9 63 aa7.85□□□□□ -1.15
CSPG5-204ENST00000465441 SEC61GP60059 68 aa7.84□□□□□ -1.15
CSPG5-204ENST00000465441 LCE5AQ5TCM9 118 aa7.83□□□□□ -1.16
CSPG5-204ENST00000465441 SERP1Q9Y6X1 66 aa7.82□□□□□ -1.16
CSPG5-204ENST00000465441 MT1EP04732 61 aa7.78□□□□□ -1.16
CSPG5-204ENST00000465441 KRTAP19-3Q7Z4W3 81 aa7.78□□□□□ -1.16
CSPG5-204ENST00000465441 DSTQ03001 7570 aaKnown RBP7.76□□□□□ -1.17
CSPG5-204ENST00000465441 CCDC179H3BU77 68 aa7.75□□□□□ -1.17
CSPG5-204ENST00000465441 KRTAP4-9Q9BYQ8 210 aa7.72□□□□□ -1.17
CSPG5-204ENST00000465441 A0A1B0GU33 70 aa7.7□□□□□ -1.18
CSPG5-204ENST00000465441 A0A0D9SG42 100 aa7.68□□□□□ -1.18
CSPG5-204ENST00000465441 ATP5EP56381 51 aaPredicted RBP7.67□□□□□ -1.18
CSPG5-204ENST00000465441 SPATA8Q6RVD6 105 aa7.67□□□□□ -1.18
CSPG5-204ENST00000465441 A0A1B0GU69 56 aa7.63□□□□□ -1.19
CSPG5-204ENST00000465441 SPINT4Q6UDR6 99 aa7.6□□□□□ -1.19
CSPG5-204ENST00000465441 KRTAP19-5Q3LI72 72 aa7.59□□□□□ -1.19
CSPG5-204ENST00000465441 GPR98Q8WXG9 6306 aa7.58□□□□□ -1.2
CSPG5-204ENST00000465441 MT1GP13640 62 aa7.57□□□□□ -1.2
CSPG5-204ENST00000465441 KRTAP12-1P59990 96 aa7.55□□□□□ -1.2
CSPG5-204ENST00000465441 TMEM258P61165 79 aa7.51□□□□□ -1.21
CSPG5-204ENST00000465441 SMIM26A0A096LP01 95 aa7.49□□□□□ -1.21
CSPG5-204ENST00000465441 LCE1DQ5T752 114 aa7.49□□□□□ -1.21
CSPG5-204ENST00000465441 PP632Q6XCG6 107 aa7.47□□□□□ -1.21
CSPG5-204ENST00000465441 PRR15LQ9BU68 103 aa7.45□□□□□ -1.22
CSPG5-204ENST00000465441 MT1MQ8N339 61 aa7.43□□□□□ -1.22
CSPG5-204ENST00000465441 LINC01558Q9Y6Z2 57 aa7.43□□□□□ -1.22
CSPG5-204ENST00000465441 A8MU10 97 aa7.41□□□□□ -1.22
CSPG5-204ENST00000465441 LCE4AQ5TA78 99 aa7.41□□□□□ -1.22
CSPG5-204ENST00000465441 MT1LQ93083 61 aa7.39□□□□□ -1.23
CSPG5-204ENST00000465441 MT4P47944 62 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms