RNA–Protein interactions for RNA: ENST00000464756.6

NFXL1-203, Transcript of nuclear transcription factor, X-box binding like 1, humanhuman

TSL 1 (best)

Gene NFXL1, Length 3,865 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFXL1-203ENST00000464756 MYCBP2O75592 4640 aa6.48□□□□□ -1.37
NFXL1-203ENST00000464756 FRAS1Q86XX4 4008 aa6.47□□□□□ -1.37
NFXL1-203ENST00000464756 C10orf95Q9H7T3 257 aa6.47□□□□□ -1.37
NFXL1-203ENST00000464756 KRTAP25-1Q3LHN0 102 aa6.46□□□□□ -1.38
NFXL1-203ENST00000464756 DNAH6Q9C0G6 4158 aa6.46□□□□□ -1.38
NFXL1-203ENST00000464756 KRTAP4-5Q9BYR2 181 aa6.45□□□□□ -1.38
NFXL1-203ENST00000464756 KIAA1109Q2LD37 5005 aa6.44□□□□□ -1.38
NFXL1-203ENST00000464756 MT1HL1P0DM35 61 aa6.41□□□□□ -1.38
NFXL1-203ENST00000464756 RYR1P21817 5038 aa6.38□□□□□ -1.39
NFXL1-203ENST00000464756 HYDINQ4G0P3 5121 aa6.38□□□□□ -1.39
NFXL1-203ENST00000464756 VPS13BQ7Z7G8 4022 aa6.36□□□□□ -1.39
NFXL1-203ENST00000464756 DYNC2H1Q8NCM8 4307 aaKnown RBP6.34□□□□□ -1.39
NFXL1-203ENST00000464756 FAT3Q8TDW7 4589 aa6.34□□□□□ -1.4
NFXL1-203ENST00000464756 LRP1Q07954 4544 aaKnown RBP6.32□□□□□ -1.4
NFXL1-203ENST00000464756 PKHD1P08F94 4074 aa6.3□□□□□ -1.4
NFXL1-203ENST00000464756 SACSQ9NZJ4 4579 aa6.3□□□□□ -1.4
NFXL1-203ENST00000464756 KRTAP13-4Q3LI77 160 aa6.29□□□□□ -1.4
NFXL1-203ENST00000464756 HECTD4Q9Y4D8 3996 aa6.29□□□□□ -1.4
NFXL1-203ENST00000464756 ALMS1Q8TCU4 4167 aa6.28□□□□□ -1.4
NFXL1-203ENST00000464756 RYR3Q15413 4870 aa6.27□□□□□ -1.41
NFXL1-203ENST00000464756 PLAC4Q8WY50 150 aa6.26□□□□□ -1.41
NFXL1-203ENST00000464756 LUZP6Q538Z0 58 aa6.26□□□□□ -1.41
NFXL1-203ENST00000464756 APOBP04114 4563 aaKnown RBP6.25□□□□□ -1.41
NFXL1-203ENST00000464756 KRTAP12-2P59991 146 aa6.25□□□□□ -1.41
NFXL1-203ENST00000464756 KRTAP10-6P60371 365 aaPredicted RBP6.25□□□□□ -1.41
NFXL1-203ENST00000464756 KRTAP3-3Q9BYR6 98 aa6.21□□□□□ -1.42
NFXL1-203ENST00000464756 KMT2CQ8NEZ4 4911 aaKnown RBP6.2□□□□□ -1.42
NFXL1-203ENST00000464756 FAT2Q9NYQ8 4349 aa6.16□□□□□ -1.42
NFXL1-203ENST00000464756 KRTAP12-1P59990 96 aa6.14□□□□□ -1.43
NFXL1-203ENST00000464756 NDUFAF8A1L188 74 aa6.13□□□□□ -1.43
NFXL1-203ENST00000464756 KRTAP10-10P60014 251 aa6.12□□□□□ -1.43
NFXL1-203ENST00000464756 KRTAP3-2Q9BYR7 98 aa6.12□□□□□ -1.43
NFXL1-203ENST00000464756 KRTAP17-1Q9BYP8 105 aa6.11□□□□□ -1.43
NFXL1-203ENST00000464756 TNP1P09430 55 aa6.07□□□□□ -1.44
NFXL1-203ENST00000464756 RYR2Q92736 4967 aa6.07□□□□□ -1.44
NFXL1-203ENST00000464756 LRP2P98164 4655 aa6.02□□□□□ -1.45
NFXL1-203ENST00000464756 LORP23490 312 aaPredicted RBP5.94□□□□□ -1.46
NFXL1-203ENST00000464756 PKD1P98161 4303 aa5.94□□□□□ -1.46
NFXL1-203ENST00000464756 KRTAP4-1Q9BYQ7 146 aa5.92□□□□□ -1.46
NFXL1-203ENST00000464756 HERC2O95714 4834 aa5.91□□□□□ -1.46
NFXL1-203ENST00000464756 HSPG2P98160 4391 aa5.84□□□□□ -1.47
NFXL1-203ENST00000464756 EPPK1P58107 5090 aaKnown RBP5.82□□□□□ -1.48
NFXL1-203ENST00000464756 PP632Q6XCG6 107 aa5.81□□□□□ -1.48
NFXL1-203ENST00000464756 LPAP08519 4548 aa5.78□□□□□ -1.48
NFXL1-203ENST00000464756 A0A0A0MQY5 61 aa5.77□□□□□ -1.49
NFXL1-203ENST00000464756 ABCA13Q86UQ4 5058 aa5.65□□□□□ -1.5
NFXL1-203ENST00000464756 PKHD1L1Q86WI1 4243 aa5.6□□□□□ -1.51
NFXL1-203ENST00000464756 PRO2289Q9P1D8 64 aa5.59□□□□□ -1.51
NFXL1-203ENST00000464756 PCLOQ9Y6V0 5065 aa5.57□□□□□ -1.52
NFXL1-203ENST00000464756 MUC2Q02817 5179 aa5.57□□□□□ -1.52
NFXL1-203ENST00000464756 TNXBP22105 4242 aa5.51□□□□□ -1.53
NFXL1-203ENST00000464756 HERC1Q15751 4861 aa5.5□□□□□ -1.53
NFXL1-203ENST00000464756 BIRC6Q9NR09 4857 aa5.5□□□□□ -1.53
NFXL1-203ENST00000464756 RNF213Q63HN8 5207 aa5.49□□□□□ -1.53
NFXL1-203ENST00000464756 KRTAP15-1Q3LI76 137 aa5.47□□□□□ -1.53
NFXL1-203ENST00000464756 MT1HP80294 61 aa5.45□□□□□ -1.54
NFXL1-203ENST00000464756 FAT4Q6V0I7 4981 aa5.4□□□□□ -1.55
NFXL1-203ENST00000464756 MT2AP02795 61 aa5.38□□□□□ -1.55
NFXL1-203ENST00000464756 LCE3AQ5TA76 89 aa5.37□□□□□ -1.55
NFXL1-203ENST00000464756 MT1FP04733 61 aa5.36□□□□□ -1.55
NFXL1-203ENST00000464756 KRTAP10-12P60413 245 aa5.34□□□□□ -1.55
NFXL1-203ENST00000464756 UBR4Q5T4S7 5183 aa5.32□□□□□ -1.56
NFXL1-203ENST00000464756 FSIP2Q5CZC0 6907 aa5.3□□□□□ -1.56
NFXL1-203ENST00000464756 SPRR2GQ9BYE4 73 aa5.25□□□□□ -1.57
NFXL1-203ENST00000464756 KRTAP12-3P60328 96 aa5.24□□□□□ -1.57
NFXL1-203ENST00000464756 KRTAP19-1Q8IUB9 90 aa5.23□□□□□ -1.57
NFXL1-203ENST00000464756 LCE2CQ5TA81 110 aa5.2□□□□□ -1.58
NFXL1-203ENST00000464756 MUC17Q685J3 4493 aa5.19□□□□□ -1.58
NFXL1-203ENST00000464756 KRTAP19-2Q3LHN2 52 aa5.17□□□□□ -1.58
NFXL1-203ENST00000464756 HMCN2Q8NDA2 5059 aa5.09□□□□□ -1.59
NFXL1-203ENST00000464756 CRCT1Q9UGL9 99 aa5.09□□□□□ -1.59
NFXL1-203ENST00000464756 FLGP20930 4061 aaPredicted RBP5.08□□□□□ -1.6
NFXL1-203ENST00000464756 KRTAP9-8Q9BYQ0 159 aa5.08□□□□□ -1.6
NFXL1-203ENST00000464756 KRTAP23-1A1A580 65 aa5.04□□□□□ -1.6
NFXL1-203ENST00000464756 KRTAP10-7P60409 375 aaPredicted RBP4.99□□□□□ -1.61
NFXL1-203ENST00000464756 MT1BP07438 61 aa4.97□□□□□ -1.61
NFXL1-203ENST00000464756 MT1XP80297 61 aa4.95□□□□□ -1.62
NFXL1-203ENST00000464756 KRTAP19-8Q3LI54 63 aa4.94□□□□□ -1.62
NFXL1-203ENST00000464756 KRTAP10-5P60370 271 aa4.91□□□□□ -1.62
NFXL1-203ENST00000464756 KRTAP19-5Q3LI72 72 aa4.91□□□□□ -1.62
NFXL1-203ENST00000464756 KRTAP8-1Q8IUC2 63 aa4.89□□□□□ -1.63
NFXL1-203ENST00000464756 KRTAP9-3Q9BYQ3 159 aa4.88□□□□□ -1.63
NFXL1-203ENST00000464756 KRTAP4-8A0A0G2JLE6 195 aa4.86□□□□□ -1.63
NFXL1-203ENST00000464756 KRTAP4-8Q9BYQ9 185 aa4.86□□□□□ -1.63
NFXL1-203ENST00000464756 USH2AO75445 5202 aa4.85□□□□□ -1.63
NFXL1-203ENST00000464756 OBSCNQ5VST9 7968 aa4.83□□□□□ -1.64
NFXL1-203ENST00000464756 LCE2BO14633 110 aa4.8□□□□□ -1.64
NFXL1-203ENST00000464756 LCE3CQ5T5A8 94 aa4.68□□□□□ -1.66
NFXL1-203ENST00000464756 SPRR2FQ96RM1 72 aa4.65□□□□□ -1.66
NFXL1-203ENST00000464756 SYNE1Q8NF91 8797 aaKnown RBP4.65□□□□□ -1.67
NFXL1-203ENST00000464756 KMT2DO14686 5537 aa4.64□□□□□ -1.67
NFXL1-203ENST00000464756 KRTAP4-7Q9BYR0 210 aa4.61□□□□□ -1.67
NFXL1-203ENST00000464756 INE1O15225 51 aa4.6□□□□□ -1.67
NFXL1-203ENST00000464756 DSTQ03001 7570 aaKnown RBP4.59□□□□□ -1.67
NFXL1-203ENST00000464756 SPRR5A0A1B0GTR4 108 aa4.54□□□□□ -1.68
NFXL1-203ENST00000464756 LCE2AQ5TA79 106 aaPredicted RBP4.53□□□□□ -1.68
NFXL1-203ENST00000464756 FCGBPQ9Y6R7 5405 aaPredicted RBP4.51□□□□□ -1.69
NFXL1-203ENST00000464756 MT1GP13640 62 aa4.45□□□□□ -1.7
NFXL1-203ENST00000464756 MT1LQ93083 61 aa4.35□□□□□ -1.71
NFXL1-203ENST00000464756 MT1EP04732 61 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms