RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 IGLV9-49A0A0B4J1Y8 123 aa2.11□□□□□ -2.07
COL8A1-205ENST00000463753 KRTAP10-11P60412 298 aa2.11□□□□□ -2.07
COL8A1-205ENST00000463753 KRTAP7-1Q8IUC3 87 aa2.11□□□□□ -2.07
COL8A1-205ENST00000463753 SPINK6Q6UWN8 80 aa2.1□□□□□ -2.07
COL8A1-205ENST00000463753 A0A087WTM6 91 aa2.1□□□□□ -2.07
COL8A1-205ENST00000463753 A0A1B0GVX0 72 aa2.1□□□□□ -2.07
COL8A1-205ENST00000463753 CHTF8P0CG12 524 aa2.1□□□□□ -2.07
COL8A1-205ENST00000463753 PSORS1C2Q9UIG4 136 aa2.1□□□□□ -2.07
COL8A1-205ENST00000463753 H0YAA0 97 aa2.09□□□□□ -2.07
COL8A1-205ENST00000463753 K7ERS5 55 aa2.09□□□□□ -2.08
COL8A1-205ENST00000463753 KRTAP11-1Q8IUC1 163 aa2.08□□□□□ -2.08
COL8A1-205ENST00000463753 Q96NJ1 140 aa2.08□□□□□ -2.08
COL8A1-205ENST00000463753 LCE1AQ5T7P2 110 aa2.07□□□□□ -2.08
COL8A1-205ENST00000463753 HSPG2P98160 4391 aa2.07□□□□□ -2.08
COL8A1-205ENST00000463753 ZNF469Q96JG9 3925 aaPredicted RBP2.07□□□□□ -2.08
COL8A1-205ENST00000463753 IGKV2D-30A0A075B6S6 120 aa2.07□□□□□ -2.08
COL8A1-205ENST00000463753 IGKV2-30P06310 120 aa2.07□□□□□ -2.08
COL8A1-205ENST00000463753 SPART-AS1P0CW21 52 aa2.07□□□□□ -2.08
COL8A1-205ENST00000463753 Q6ZSA8 131 aa2.07□□□□□ -2.08
COL8A1-205ENST00000463753 FAT4Q6V0I7 4981 aa2.06□□□□□ -2.08
COL8A1-205ENST00000463753 MYCBP2O75592 4640 aa2.06□□□□□ -2.08
COL8A1-205ENST00000463753 C10orf95Q9H7T3 257 aa2.06□□□□□ -2.08
COL8A1-205ENST00000463753 COL7A1Q02388 2944 aa2.05□□□□□ -2.08
COL8A1-205ENST00000463753 PANO1I0J062 215 aa2.05□□□□□ -2.08
COL8A1-205ENST00000463753 LY6G6CO95867 125 aa2.05□□□□□ -2.08
COL8A1-205ENST00000463753 SSPOA2VEC9 5147 aa2.05□□□□□ -2.08
COL8A1-205ENST00000463753 A0A1B0GU33 70 aa2.04□□□□□ -2.08
COL8A1-205ENST00000463753 KRTAP13-3Q3SY46 172 aa2.04□□□□□ -2.08
COL8A1-205ENST00000463753 TPRXLQ17RH7 258 aa2.04□□□□□ -2.08
COL8A1-205ENST00000463753 FRAS1Q86XX4 4008 aa2.04□□□□□ -2.08
COL8A1-205ENST00000463753 TYMSOSQ8TAI1 123 aa2.04□□□□□ -2.08
COL8A1-205ENST00000463753 FAT1Q14517 4588 aa2.03□□□□□ -2.08
COL8A1-205ENST00000463753 NBDYA0A0U1RRE5 68 aa2.03□□□□□ -2.08
COL8A1-205ENST00000463753 SEC61BP60468 96 aaKnown RBP2.03□□□□□ -2.08
COL8A1-205ENST00000463753 ANAPC11Q9NYG5 84 aa2.03□□□□□ -2.08
COL8A1-205ENST00000463753 C14orf177Q52M58 125 aa2.03□□□□□ -2.08
COL8A1-205ENST00000463753 CIRBP-AS1Q8TBR5 109 aa2.03□□□□□ -2.08
COL8A1-205ENST00000463753 SPRR1BP22528 89 aa2.02□□□□□ -2.09
COL8A1-205ENST00000463753 DNAH5Q8TE73 4624 aa2.02□□□□□ -2.09
COL8A1-205ENST00000463753 HMCN2Q8NDA2 5059 aa2.02□□□□□ -2.09
COL8A1-205ENST00000463753 LINC01556Q5JQF7 62 aa2.01□□□□□ -2.09
COL8A1-205ENST00000463753 H1FX-AS1Q4G0G2 97 aa2.01□□□□□ -2.09
COL8A1-205ENST00000463753 APOBP04114 4563 aaKnown RBP2□□□□□ -2.09
COL8A1-205ENST00000463753 H3BNG1 76 aa2□□□□□ -2.09
COL8A1-205ENST00000463753 DMBT1Q9UGM3 2413 aaPredicted RBP2□□□□□ -2.09
COL8A1-205ENST00000463753 TGP01266 2768 aa2□□□□□ -2.09
COL8A1-205ENST00000463753 A0A0D9SG42 100 aa2□□□□□ -2.09
COL8A1-205ENST00000463753 VWFP04275 2813 aa1.99□□□□□ -2.09
COL8A1-205ENST00000463753 NOTCH1P46531 2555 aa1.99□□□□□ -2.09
COL8A1-205ENST00000463753 KRTAP1-5Q9BYS1 174 aa1.98□□□□□ -2.09
COL8A1-205ENST00000463753 APLNQ9ULZ1 77 aa1.97□□□□□ -2.09
COL8A1-205ENST00000463753 KRTAP5-9P26371 169 aa1.97□□□□□ -2.09
COL8A1-205ENST00000463753 PKD1P98161 4303 aa1.97□□□□□ -2.09
COL8A1-205ENST00000463753 KRTAP6-3Q3LI67 103 aa1.97□□□□□ -2.09
COL8A1-205ENST00000463753 TENM3Q9P273 2699 aa1.97□□□□□ -2.09
COL8A1-205ENST00000463753 COX6B2Q6YFQ2 88 aa1.96□□□□□ -2.1
COL8A1-205ENST00000463753 RPL37P61927 97 aaKnown RBP1.95□□□□□ -2.1
COL8A1-205ENST00000463753 Q5VSD8 79 aa1.95□□□□□ -2.1
COL8A1-205ENST00000463753 MUC17Q685J3 4493 aa1.95□□□□□ -2.1
COL8A1-205ENST00000463753 DNAH8Q96JB1 4490 aa1.95□□□□□ -2.1
COL8A1-205ENST00000463753 UBR4Q5T4S7 5183 aa1.94□□□□□ -2.1
COL8A1-205ENST00000463753 KRTAP13-1Q8IUC0 172 aa1.93□□□□□ -2.1
COL8A1-205ENST00000463753 STARD9Q9P2P6 4700 aa1.93□□□□□ -2.1
COL8A1-205ENST00000463753 STAB2Q8WWQ8 2551 aa1.91□□□□□ -2.1
COL8A1-205ENST00000463753 SPACA4Q8TDM5 124 aa1.9□□□□□ -2.1
COL8A1-205ENST00000463753 KRTAP20-1Q3LI63 56 aa1.89□□□□□ -2.11
COL8A1-205ENST00000463753 KRTAP13-4Q3LI77 160 aa1.89□□□□□ -2.11
COL8A1-205ENST00000463753 KRTAP10-4P60372 401 aaPredicted RBP1.88□□□□□ -2.11
COL8A1-205ENST00000463753 PLAC4Q8WY50 150 aa1.88□□□□□ -2.11
COL8A1-205ENST00000463753 S4R3F8 94 aa1.88□□□□□ -2.11
COL8A1-205ENST00000463753 UBE2DNLQ8IWF7 75 aa1.87□□□□□ -2.11
COL8A1-205ENST00000463753 KRTAP2-2Q9BYT5 123 aa1.87□□□□□ -2.11
COL8A1-205ENST00000463753 KRTAP12-2P59991 146 aa1.87□□□□□ -2.11
COL8A1-205ENST00000463753 RNF213Q63HN8 5207 aa1.86□□□□□ -2.11
COL8A1-205ENST00000463753 MT1HL1P0DM35 61 aa1.86□□□□□ -2.11
COL8A1-205ENST00000463753 CAMK2N1Q7Z7J9 78 aa1.86□□□□□ -2.11
COL8A1-205ENST00000463753 MT3P25713 68 aa1.84□□□□□ -2.12
COL8A1-205ENST00000463753 MUC2Q02817 5179 aa1.84□□□□□ -2.12
COL8A1-205ENST00000463753 C9orf92A6NGG3 77 aa1.83□□□□□ -2.12
COL8A1-205ENST00000463753 KRTAP1-4P0C5Y4 121 aa1.83□□□□□ -2.12
COL8A1-205ENST00000463753 KRTAP2-3P0C7H8 128 aa1.83□□□□□ -2.12
COL8A1-205ENST00000463753 KRTAP10-6P60371 365 aaPredicted RBP1.83□□□□□ -2.12
COL8A1-205ENST00000463753 KRTAP2-4Q9BYR9 128 aa1.83□□□□□ -2.12
COL8A1-205ENST00000463753 KRTAP10-8P60410 259 aa1.82□□□□□ -2.12
COL8A1-205ENST00000463753 KRTAP5-4Q6L8H1 288 aa1.81□□□□□ -2.12
COL8A1-205ENST00000463753 KRTAP13-2Q52LG2 175 aa1.81□□□□□ -2.12
COL8A1-205ENST00000463753 KRTAP12-1P59990 96 aa1.8□□□□□ -2.12
COL8A1-205ENST00000463753 LRP1Q07954 4544 aaKnown RBP1.8□□□□□ -2.12
COL8A1-205ENST00000463753 Q6ZRN7 208 aaPredicted RBP1.8□□□□□ -2.12
COL8A1-205ENST00000463753 NEBP20929 6669 aa1.78□□□□□ -2.12
COL8A1-205ENST00000463753 PRO2289Q9P1D8 64 aa1.77□□□□□ -2.13
COL8A1-205ENST00000463753 R4GN34 69 aa1.77□□□□□ -2.13
COL8A1-205ENST00000463753 RPS29P62273 56 aaKnown RBP1.73□□□□□ -2.13
COL8A1-205ENST00000463753 KRTAP19-6Q3LI70 58 aa1.73□□□□□ -2.13
COL8A1-205ENST00000463753 KRTAP10-1P60331 282 aa1.72□□□□□ -2.13
COL8A1-205ENST00000463753 KRTAP2-1Q9BYU5 128 aa1.72□□□□□ -2.13
COL8A1-205ENST00000463753 GPR98Q8WXG9 6306 aa1.72□□□□□ -2.13
COL8A1-205ENST00000463753 LCE1EQ5T753 118 aa1.71□□□□□ -2.14
COL8A1-205ENST00000463753 M0QZ58 72 aa1.7□□□□□ -2.14
COL8A1-205ENST00000463753 KRTAP5-7Q6L8G8 165 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms