RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 LCE1AQ5T7P2 110 aa7.3□□□□□ -1.24
HMGN1-209ENST00000463631 UBL5Q9BZL1 73 aa7.3□□□□□ -1.24
HMGN1-209ENST00000463631 A0A087WVE0 104 aa7.29□□□□□ -1.24
HMGN1-209ENST00000463631 A0A1W2PPM0 123 aa7.29□□□□□ -1.24
HMGN1-209ENST00000463631 C9orf118A6NHY6 69 aa7.29□□□□□ -1.24
HMGN1-209ENST00000463631 H0YAA0 97 aa7.29□□□□□ -1.24
HMGN1-209ENST00000463631 MT1XP80297 61 aa7.28□□□□□ -1.24
HMGN1-209ENST00000463631 KRTAP8-1Q8IUC2 63 aa7.28□□□□□ -1.24
HMGN1-209ENST00000463631 BATFQ16520 125 aa7.26□□□□□ -1.25
HMGN1-209ENST00000463631 CYP4F30PQ9H0H9 118 aa7.26□□□□□ -1.25
HMGN1-209ENST00000463631 TAX1BP3O14907 124 aa7.23□□□□□ -1.25
HMGN1-209ENST00000463631 KRTAP12-2P59991 146 aa7.22□□□□□ -1.25
HMGN1-209ENST00000463631 A8MUN3 132 aa7.2□□□□□ -1.26
HMGN1-209ENST00000463631 SMIM6P0DI80 62 aa7.2□□□□□ -1.26
HMGN1-209ENST00000463631 SPRR2DP22532 72 aa7.18□□□□□ -1.26
HMGN1-209ENST00000463631 H3BS24 57 aa7.17□□□□□ -1.26
HMGN1-209ENST00000463631 NDUFC1O43677 76 aa7.17□□□□□ -1.26
HMGN1-209ENST00000463631 LOC101927531A0A1B0GV80 90 aa7.15□□□□□ -1.26
HMGN1-209ENST00000463631 SPCS1Q9Y6A9 102 aa7.15□□□□□ -1.26
HMGN1-209ENST00000463631 TRAV22A0A0B4J277 110 aa7.14□□□□□ -1.27
HMGN1-209ENST00000463631 PLAC4Q8WY50 150 aa7.13□□□□□ -1.27
HMGN1-209ENST00000463631 ADM2Q7Z4H4 148 aa7.12□□□□□ -1.27
HMGN1-209ENST00000463631 K7EP34 96 aa7.08□□□□□ -1.28
HMGN1-209ENST00000463631 PRO0461Q9UI25 63 aa7.08□□□□□ -1.28
HMGN1-209ENST00000463631 KRTAP4-8A0A0G2JLE6 195 aa7.06□□□□□ -1.28
HMGN1-209ENST00000463631 KRTAP4-8Q9BYQ9 185 aa7.06□□□□□ -1.28
HMGN1-209ENST00000463631 LCE3BQ5TA77 95 aa7.02□□□□□ -1.29
HMGN1-209ENST00000463631 ACYP1P07311 99 aa7□□□□□ -1.29
HMGN1-209ENST00000463631 R4GN34 69 aa6.99□□□□□ -1.29
HMGN1-209ENST00000463631 ATOX1O00244 68 aa6.97□□□□□ -1.29
HMGN1-209ENST00000463631 UQCRQO14949 82 aa6.94□□□□□ -1.3
HMGN1-209ENST00000463631 H0Y9P7 68 aa6.93□□□□□ -1.3
HMGN1-209ENST00000463631 C20orf197Q8N268 126 aa6.93□□□□□ -1.3
HMGN1-209ENST00000463631 P0C880 135 aa6.92□□□□□ -1.3
HMGN1-209ENST00000463631 KRTAP10-12P60413 245 aa6.92□□□□□ -1.3
HMGN1-209ENST00000463631 M0QZ58 72 aa6.91□□□□□ -1.3
HMGN1-209ENST00000463631 KRTAP10-7P60409 375 aaPredicted RBP6.91□□□□□ -1.3
HMGN1-209ENST00000463631 GPR98Q8WXG9 6306 aa6.91□□□□□ -1.3
HMGN1-209ENST00000463631 COL5A1-AS1Q5SY13 56 aa6.85□□□□□ -1.31
HMGN1-209ENST00000463631 ETDBQ3ZM63 59 aa6.83□□□□□ -1.32
HMGN1-209ENST00000463631 ATP5EP2Q5VTU8 51 aa6.82□□□□□ -1.32
HMGN1-209ENST00000463631 F8W1H4 67 aa6.81□□□□□ -1.32
HMGN1-209ENST00000463631 LINC01554Q52M75 96 aa6.8□□□□□ -1.32
HMGN1-209ENST00000463631 LINC00208Q96KT6 92 aa6.78□□□□□ -1.32
HMGN1-209ENST00000463631 HIST1H4AP62805 103 aaKnown RBP6.77□□□□□ -1.33
HMGN1-209ENST00000463631 GTF2H5Q6ZYL4 71 aa6.77□□□□□ -1.33
HMGN1-209ENST00000463631 KRTAP4-12Q9BQ66 201 aa6.77□□□□□ -1.33
HMGN1-209ENST00000463631 DSTQ03001 7570 aaKnown RBP6.72□□□□□ -1.33
HMGN1-209ENST00000463631 FAM240AA0A1B0GVK7 77 aa6.71□□□□□ -1.34
HMGN1-209ENST00000463631 LOC105371267A0A1B0GV96 52 aa6.7□□□□□ -1.34
HMGN1-209ENST00000463631 MP68P56378 58 aa6.69□□□□□ -1.34
HMGN1-209ENST00000463631 DMAC1Q96GE9 116 aa6.68□□□□□ -1.34
HMGN1-209ENST00000463631 OCR1Q9BZK8 76 aa6.66□□□□□ -1.34
HMGN1-209ENST00000463631 KRTAP4-9Q9BYQ8 210 aa6.61□□□□□ -1.35
HMGN1-209ENST00000463631 LCE5AQ5TCM9 118 aa6.6□□□□□ -1.35
HMGN1-209ENST00000463631 MT-ATP8P03928 68 aa6.59□□□□□ -1.35
HMGN1-209ENST00000463631 H3BPC8 53 aa6.56□□□□□ -1.36
HMGN1-209ENST00000463631 KRTAP19-4Q3LI73 84 aa6.55□□□□□ -1.36
HMGN1-209ENST00000463631 LINC00643Q86TS7 51 aa6.54□□□□□ -1.36
HMGN1-209ENST00000463631 TRAV7A0A075B6U4 112 aa6.52□□□□□ -1.37
HMGN1-209ENST00000463631 KRTAP19-7Q3SYF9 63 aa6.52□□□□□ -1.37
HMGN1-209ENST00000463631 KRTAP19-3Q7Z4W3 81 aa6.51□□□□□ -1.37
HMGN1-209ENST00000463631 MT1EP04732 61 aa6.48□□□□□ -1.37
HMGN1-209ENST00000463631 LCE1DQ5T752 114 aa6.45□□□□□ -1.38
HMGN1-209ENST00000463631 KRTAP9-9Q9BYP9 154 aa6.43□□□□□ -1.38
HMGN1-209ENST00000463631 KRTAP9-4Q9BYQ2 154 aa6.43□□□□□ -1.38
HMGN1-209ENST00000463631 SPTSSBQ8NFR3 76 aa6.41□□□□□ -1.38
HMGN1-209ENST00000463631 HMCN1Q96RW7 5635 aa6.38□□□□□ -1.39
HMGN1-209ENST00000463631 ACYP2P14621 99 aa6.38□□□□□ -1.39
HMGN1-209ENST00000463631 CYSTM1Q9H1C7 97 aa6.38□□□□□ -1.39
HMGN1-209ENST00000463631 LCE4AQ5TA78 99 aa6.35□□□□□ -1.39
HMGN1-209ENST00000463631 CAMK2N1Q7Z7J9 78 aa6.35□□□□□ -1.39
HMGN1-209ENST00000463631 MT1GP13640 62 aa6.31□□□□□ -1.4
HMGN1-209ENST00000463631 MT4P47944 62 aa6.29□□□□□ -1.4
HMGN1-209ENST00000463631 KRTAP13-4Q3LI77 160 aa6.29□□□□□ -1.4
HMGN1-209ENST00000463631 SCGB1A1P11684 91 aa6.27□□□□□ -1.41
HMGN1-209ENST00000463631 PCP4L1A6NKN8 68 aa6.26□□□□□ -1.41
HMGN1-209ENST00000463631 PP632Q6XCG6 107 aa6.26□□□□□ -1.41
HMGN1-209ENST00000463631 AHNAK2Q8IVF2 5795 aa6.25□□□□□ -1.41
HMGN1-209ENST00000463631 CHKB-CPT1BH3BT56 60 aa6.24□□□□□ -1.41
HMGN1-209ENST00000463631 KRTAP5-10Q6L8G5 202 aa6.23□□□□□ -1.41
HMGN1-209ENST00000463631 KRTAP19-5Q3LI72 72 aa6.21□□□□□ -1.42
HMGN1-209ENST00000463631 MT1MQ8N339 61 aa6.2□□□□□ -1.42
HMGN1-209ENST00000463631 A0A0D9SG42 100 aa6.18□□□□□ -1.42
HMGN1-209ENST00000463631 KRTAP5-4Q6L8H1 288 aa6.18□□□□□ -1.42
HMGN1-209ENST00000463631 MT1LQ93083 61 aa6.12□□□□□ -1.43
HMGN1-209ENST00000463631 J3QR89 54 aa6.05□□□□□ -1.44
HMGN1-209ENST00000463631 KRTAP5-7Q6L8G8 165 aa6.05□□□□□ -1.44
HMGN1-209ENST00000463631 SMIM20Q8N5G0 67 aa6.05□□□□□ -1.44
HMGN1-209ENST00000463631 KRTAP4-7Q9BYR0 210 aa6.04□□□□□ -1.44
HMGN1-209ENST00000463631 KRTAP4-3Q9BYR4 195 aa6.02□□□□□ -1.45
HMGN1-209ENST00000463631 SPANXA2-OT1Q8N9U9 137 aa6.01□□□□□ -1.45
HMGN1-209ENST00000463631 KRTAP5-3Q6L8H2 238 aa5.97□□□□□ -1.45
HMGN1-209ENST00000463631 SNURFQ9Y675 71 aa5.96□□□□□ -1.46
HMGN1-209ENST00000463631 SPINT4Q6UDR6 99 aa5.95□□□□□ -1.46
HMGN1-209ENST00000463631 KRTAP12-1P59990 96 aa5.93□□□□□ -1.46
HMGN1-209ENST00000463631 A0A1B0GV90 55 aa5.92□□□□□ -1.46
HMGN1-209ENST00000463631 KRTAP23-1A1A580 65 aa5.92□□□□□ -1.46
HMGN1-209ENST00000463631 SPATA8Q6RVD6 105 aa5.92□□□□□ -1.46
HMGN1-209ENST00000463631 C10orf95Q9H7T3 257 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms