RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 SPCS1Q9Y6A9 102 aa6.6□□□□□ -1.35
CMSS1-202ENST00000463526 SPRR2FQ96RM1 72 aa6.56□□□□□ -1.36
CMSS1-202ENST00000463526 CYP4F30PQ9H0H9 118 aa6.56□□□□□ -1.36
CMSS1-202ENST00000463526 SPRR2EP22531 72 aa6.53□□□□□ -1.36
CMSS1-202ENST00000463526 SPRR2BP35325 72 aa6.53□□□□□ -1.36
CMSS1-202ENST00000463526 SPRR2AP35326 72 aa6.53□□□□□ -1.36
CMSS1-202ENST00000463526 K7EP34 96 aa6.5□□□□□ -1.37
CMSS1-202ENST00000463526 PRO0461Q9UI25 63 aa6.49□□□□□ -1.37
CMSS1-202ENST00000463526 NDUFC1O43677 76 aa6.46□□□□□ -1.38
CMSS1-202ENST00000463526 PRO2289Q9P1D8 64 aa6.45□□□□□ -1.38
CMSS1-202ENST00000463526 LOC101927531A0A1B0GV80 90 aa6.44□□□□□ -1.38
CMSS1-202ENST00000463526 ADM2Q7Z4H4 148 aa6.44□□□□□ -1.38
CMSS1-202ENST00000463526 TRAV22A0A0B4J277 110 aa6.43□□□□□ -1.38
CMSS1-202ENST00000463526 A8MUN3 132 aa6.43□□□□□ -1.38
CMSS1-202ENST00000463526 MT1XP80297 61 aa6.43□□□□□ -1.38
CMSS1-202ENST00000463526 KRTAP8-1Q8IUC2 63 aa6.43□□□□□ -1.38
CMSS1-202ENST00000463526 H0YAA0 97 aa6.42□□□□□ -1.38
CMSS1-202ENST00000463526 PLAC4Q8WY50 150 aa6.4□□□□□ -1.38
CMSS1-202ENST00000463526 LCE1AQ5T7P2 110 aa6.37□□□□□ -1.39
CMSS1-202ENST00000463526 KRTAP2-2Q9BYT5 123 aa6.37□□□□□ -1.39
CMSS1-202ENST00000463526 KRTAP2-1Q9BYU5 128 aa6.37□□□□□ -1.39
CMSS1-202ENST00000463526 COL5A1-AS1Q5SY13 56 aa6.35□□□□□ -1.39
CMSS1-202ENST00000463526 ACYP1P07311 99 aa6.34□□□□□ -1.39
CMSS1-202ENST00000463526 H0Y9P7 68 aa6.33□□□□□ -1.4
CMSS1-202ENST00000463526 SPRR2DP22532 72 aa6.32□□□□□ -1.4
CMSS1-202ENST00000463526 ETDBQ3ZM63 59 aa6.32□□□□□ -1.4
CMSS1-202ENST00000463526 LOC105371267A0A1B0GV96 52 aa6.31□□□□□ -1.4
CMSS1-202ENST00000463526 KRTAP4-8A0A0G2JLE6 195 aa6.3□□□□□ -1.4
CMSS1-202ENST00000463526 UQCRQO14949 82 aa6.3□□□□□ -1.4
CMSS1-202ENST00000463526 KRTAP4-8Q9BYQ9 185 aa6.3□□□□□ -1.4
CMSS1-202ENST00000463526 KRTAP12-2P59991 146 aa6.29□□□□□ -1.4
CMSS1-202ENST00000463526 ATOX1O00244 68 aa6.28□□□□□ -1.4
CMSS1-202ENST00000463526 R4GN34 69 aa6.28□□□□□ -1.4
CMSS1-202ENST00000463526 GTF2H5Q6ZYL4 71 aa6.27□□□□□ -1.41
CMSS1-202ENST00000463526 F8W1H4 67 aa6.26□□□□□ -1.41
CMSS1-202ENST00000463526 HIST1H4AP62805 103 aaKnown RBP6.26□□□□□ -1.41
CMSS1-202ENST00000463526 M0QZ58 72 aa6.24□□□□□ -1.41
CMSS1-202ENST00000463526 P0C880 135 aa6.24□□□□□ -1.41
CMSS1-202ENST00000463526 LINC01554Q52M75 96 aa6.21□□□□□ -1.42
CMSS1-202ENST00000463526 LINC00208Q96KT6 92 aa6.21□□□□□ -1.42
CMSS1-202ENST00000463526 C20orf197Q8N268 126 aa6.18□□□□□ -1.42
CMSS1-202ENST00000463526 KRTAP10-7P60409 375 aaPredicted RBP6.16□□□□□ -1.42
CMSS1-202ENST00000463526 LCE3BQ5TA77 95 aa6.16□□□□□ -1.42
CMSS1-202ENST00000463526 ATP5EP2Q5VTU8 51 aa6.16□□□□□ -1.42
CMSS1-202ENST00000463526 MP68P56378 58 aa6.11□□□□□ -1.43
CMSS1-202ENST00000463526 KRTAP10-12P60413 245 aa6.08□□□□□ -1.44
CMSS1-202ENST00000463526 FAM240AA0A1B0GVK7 77 aa6.07□□□□□ -1.44
CMSS1-202ENST00000463526 OCR1Q9BZK8 76 aa6.04□□□□□ -1.44
CMSS1-202ENST00000463526 PCP4L1A6NKN8 68 aa6.02□□□□□ -1.45
CMSS1-202ENST00000463526 DMAC1Q96GE9 116 aa6.01□□□□□ -1.45
CMSS1-202ENST00000463526 LINC00643Q86TS7 51 aa6□□□□□ -1.45
CMSS1-202ENST00000463526 MT-ATP8P03928 68 aa5.99□□□□□ -1.45
CMSS1-202ENST00000463526 GPR98Q8WXG9 6306 aa5.95□□□□□ -1.46
CMSS1-202ENST00000463526 H3BPC8 53 aa5.93□□□□□ -1.46
CMSS1-202ENST00000463526 KRTAP4-12Q9BQ66 201 aa5.88□□□□□ -1.47
CMSS1-202ENST00000463526 TRAV7A0A075B6U4 112 aa5.86□□□□□ -1.47
CMSS1-202ENST00000463526 DSTQ03001 7570 aaKnown RBP5.86□□□□□ -1.47
CMSS1-202ENST00000463526 SCGB1A1P11684 91 aa5.85□□□□□ -1.47
CMSS1-202ENST00000463526 KRTAP4-9Q9BYQ8 210 aa5.85□□□□□ -1.47
CMSS1-202ENST00000463526 ACYP2P14621 99 aa5.83□□□□□ -1.48
CMSS1-202ENST00000463526 SPTSSBQ8NFR3 76 aa5.81□□□□□ -1.48
CMSS1-202ENST00000463526 KRTAP9-9Q9BYP9 154 aa5.78□□□□□ -1.48
CMSS1-202ENST00000463526 KRTAP9-4Q9BYQ2 154 aa5.78□□□□□ -1.48
CMSS1-202ENST00000463526 LCE5AQ5TCM9 118 aa5.77□□□□□ -1.49
CMSS1-202ENST00000463526 CHKB-CPT1BH3BT56 60 aa5.76□□□□□ -1.49
CMSS1-202ENST00000463526 CAMK2N1Q7Z7J9 78 aa5.75□□□□□ -1.49
CMSS1-202ENST00000463526 KRTAP19-7Q3SYF9 63 aa5.74□□□□□ -1.49
CMSS1-202ENST00000463526 KRTAP19-3Q7Z4W3 81 aa5.73□□□□□ -1.49
CMSS1-202ENST00000463526 MT1EP04732 61 aa5.72□□□□□ -1.49
CMSS1-202ENST00000463526 KRTAP13-4Q3LI77 160 aa5.71□□□□□ -1.5
CMSS1-202ENST00000463526 H3BS24 57 aa5.7□□□□□ -1.5
CMSS1-202ENST00000463526 LCE1DQ5T752 114 aa5.64□□□□□ -1.51
CMSS1-202ENST00000463526 A0A1B0GV90 55 aa5.63□□□□□ -1.51
CMSS1-202ENST00000463526 CYSTM1Q9H1C7 97 aa5.63□□□□□ -1.51
CMSS1-202ENST00000463526 J3QR89 54 aa5.62□□□□□ -1.51
CMSS1-202ENST00000463526 MT4P47944 62 aa5.58□□□□□ -1.52
CMSS1-202ENST00000463526 A0A0D9SG42 100 aa5.56□□□□□ -1.52
CMSS1-202ENST00000463526 KRTAP19-5Q3LI72 72 aa5.56□□□□□ -1.52
CMSS1-202ENST00000463526 SNURFQ9Y675 71 aa5.56□□□□□ -1.52
CMSS1-202ENST00000463526 MT1GP13640 62 aa5.55□□□□□ -1.52
CMSS1-202ENST00000463526 HMCN1Q96RW7 5635 aa5.54□□□□□ -1.52
CMSS1-202ENST00000463526 KRTAP4-7Q9BYR0 210 aa5.54□□□□□ -1.52
CMSS1-202ENST00000463526 SMIM20Q8N5G0 67 aa5.53□□□□□ -1.52
CMSS1-202ENST00000463526 LCE4AQ5TA78 99 aa5.52□□□□□ -1.53
CMSS1-202ENST00000463526 PP632Q6XCG6 107 aa5.51□□□□□ -1.53
CMSS1-202ENST00000463526 AHNAK2Q8IVF2 5795 aa5.49□□□□□ -1.53
CMSS1-202ENST00000463526 SPINT4Q6UDR6 99 aa5.48□□□□□ -1.53
CMSS1-202ENST00000463526 MT1MQ8N339 61 aa5.47□□□□□ -1.53
CMSS1-202ENST00000463526 SPATA8Q6RVD6 105 aa5.45□□□□□ -1.54
CMSS1-202ENST00000463526 SPANXA2-OT1Q8N9U9 137 aa5.44□□□□□ -1.54
CMSS1-202ENST00000463526 MT1LQ93083 61 aa5.42□□□□□ -1.54
CMSS1-202ENST00000463526 KRTAP4-3Q9BYR4 195 aa5.41□□□□□ -1.54
CMSS1-202ENST00000463526 SERP1Q9Y6X1 66 aa5.41□□□□□ -1.54
CMSS1-202ENST00000463526 SEC61GP60059 68 aa5.4□□□□□ -1.54
CMSS1-202ENST00000463526 COA5Q86WW8 74 aa5.37□□□□□ -1.55
CMSS1-202ENST00000463526 KRTAP12-1P59990 96 aa5.36□□□□□ -1.55
CMSS1-202ENST00000463526 KRTAP5-10Q6L8G5 202 aa5.36□□□□□ -1.55
CMSS1-202ENST00000463526 KRTAP5-4Q6L8H1 288 aa5.35□□□□□ -1.55
CMSS1-202ENST00000463526 A0A1B0GU33 70 aa5.34□□□□□ -1.55
CMSS1-202ENST00000463526 KRTAP4-2Q9BYR5 136 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms