RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 ATP5EP2Q5VTU8 51 aa3.26□□□□□ -1.89
PTPRF-210ENST00000463041 CRIPTQ9P021 101 aa3.25□□□□□ -1.89
PTPRF-210ENST00000463041 ATOX1O00244 68 aa3.24□□□□□ -1.89
PTPRF-210ENST00000463041 HIST1H4AP62805 103 aaKnown RBP3.24□□□□□ -1.89
PTPRF-210ENST00000463041 IMUPQ9GZP8 106 aa3.24□□□□□ -1.89
PTPRF-210ENST00000463041 A0A087WVE0 104 aa3.22□□□□□ -1.89
PTPRF-210ENST00000463041 H0Y9P7 68 aa3.22□□□□□ -1.89
PTPRF-210ENST00000463041 NDUFC1O43677 76 aa3.22□□□□□ -1.89
PTPRF-210ENST00000463041 KRTAP10-5P60370 271 aa3.21□□□□□ -1.9
PTPRF-210ENST00000463041 LINC00643Q86TS7 51 aa3.21□□□□□ -1.9
PTPRF-210ENST00000463041 MUC12Q9UKN1 5478 aa3.2□□□□□ -1.9
PTPRF-210ENST00000463041 A8MUN3 132 aa3.2□□□□□ -1.9
PTPRF-210ENST00000463041 H0YAA0 97 aa3.2□□□□□ -1.9
PTPRF-210ENST00000463041 LINC00208Q96KT6 92 aa3.18□□□□□ -1.9
PTPRF-210ENST00000463041 MP68P56378 58 aa3.16□□□□□ -1.9
PTPRF-210ENST00000463041 NEBP20929 6669 aa3.15□□□□□ -1.9
PTPRF-210ENST00000463041 OCR1Q9BZK8 76 aa3.15□□□□□ -1.91
PTPRF-210ENST00000463041 ADM2Q7Z4H4 148 aa3.14□□□□□ -1.91
PTPRF-210ENST00000463041 H3BPC8 53 aa3.13□□□□□ -1.91
PTPRF-210ENST00000463041 MDN1Q9NU22 5596 aa3.12□□□□□ -1.91
PTPRF-210ENST00000463041 KMT2DO14686 5537 aa3.11□□□□□ -1.91
PTPRF-210ENST00000463041 A0A1B0GV90 55 aa3.11□□□□□ -1.91
PTPRF-210ENST00000463041 J3QR89 54 aa3.11□□□□□ -1.91
PTPRF-210ENST00000463041 KRTAP5-9P26371 169 aa3.11□□□□□ -1.91
PTPRF-210ENST00000463041 PLAC4Q8WY50 150 aa3.1□□□□□ -1.91
PTPRF-210ENST00000463041 PRO2289Q9P1D8 64 aa3.1□□□□□ -1.91
PTPRF-210ENST00000463041 SCGB1A1P11684 91 aa3.09□□□□□ -1.91
PTPRF-210ENST00000463041 C20orf197Q8N268 126 aa3.09□□□□□ -1.91
PTPRF-210ENST00000463041 R4GN34 69 aa3.08□□□□□ -1.92
PTPRF-210ENST00000463041 DMAC1Q96GE9 116 aa3.07□□□□□ -1.92
PTPRF-210ENST00000463041 P0C880 135 aa3.06□□□□□ -1.92
PTPRF-210ENST00000463041 MT1XP80297 61 aa3.05□□□□□ -1.92
PTPRF-210ENST00000463041 M0QZ58 72 aa3.04□□□□□ -1.92
PTPRF-210ENST00000463041 KRTAP20-1Q3LI63 56 aa3.04□□□□□ -1.92
PTPRF-210ENST00000463041 KRTAP3-2Q9BYR7 98 aa3.04□□□□□ -1.92
PTPRF-210ENST00000463041 TRAV7A0A075B6U4 112 aa3.03□□□□□ -1.92
PTPRF-210ENST00000463041 ACYP2P14621 99 aa3.03□□□□□ -1.92
PTPRF-210ENST00000463041 KRTAP12-2P59991 146 aa3.01□□□□□ -1.93
PTPRF-210ENST00000463041 SMIM20Q8N5G0 67 aa3.01□□□□□ -1.93
PTPRF-210ENST00000463041 SPTSSBQ8NFR3 76 aa3□□□□□ -1.93
PTPRF-210ENST00000463041 SPRR2FQ96RM1 72 aa3□□□□□ -1.93
PTPRF-210ENST00000463041 KRTAP2-3P0C7H8 128 aa2.99□□□□□ -1.93
PTPRF-210ENST00000463041 LINC01554Q52M75 96 aa2.99□□□□□ -1.93
PTPRF-210ENST00000463041 KRTAP2-4Q9BYR9 128 aa2.99□□□□□ -1.93
PTPRF-210ENST00000463041 KRTAP8-1Q8IUC2 63 aa2.98□□□□□ -1.93
PTPRF-210ENST00000463041 MT-ATP8P03928 68 aa2.96□□□□□ -1.94
PTPRF-210ENST00000463041 SPRR2EP22531 72 aa2.96□□□□□ -1.94
PTPRF-210ENST00000463041 SPRR2BP35325 72 aa2.96□□□□□ -1.94
PTPRF-210ENST00000463041 SPRR2AP35326 72 aa2.96□□□□□ -1.94
PTPRF-210ENST00000463041 K7ERU9 68 aa2.95□□□□□ -1.94
PTPRF-210ENST00000463041 CHKB-CPT1BH3BT56 60 aa2.94□□□□□ -1.94
PTPRF-210ENST00000463041 KRTAP4-8A0A0G2JLE6 195 aa2.93□□□□□ -1.94
PTPRF-210ENST00000463041 LCE1AQ5T7P2 110 aa2.93□□□□□ -1.94
PTPRF-210ENST00000463041 KRTAP4-8Q9BYQ9 185 aa2.93□□□□□ -1.94
PTPRF-210ENST00000463041 KRTAP10-7P60409 375 aaPredicted RBP2.91□□□□□ -1.94
PTPRF-210ENST00000463041 KRTAP10-12P60413 245 aa2.91□□□□□ -1.94
PTPRF-210ENST00000463041 SPANXA2-OT1Q8N9U9 137 aa2.91□□□□□ -1.94
PTPRF-210ENST00000463041 SNURFQ9Y675 71 aa2.9□□□□□ -1.95
PTPRF-210ENST00000463041 KRTAP2-2Q9BYT5 123 aa2.89□□□□□ -1.95
PTPRF-210ENST00000463041 KRTAP2-1Q9BYU5 128 aa2.89□□□□□ -1.95
PTPRF-210ENST00000463041 SERP2Q8N6R1 65 aa2.87□□□□□ -1.95
PTPRF-210ENST00000463041 SPRR2DP22532 72 aa2.86□□□□□ -1.95
PTPRF-210ENST00000463041 KRTAP13-4Q3LI77 160 aa2.83□□□□□ -1.96
PTPRF-210ENST00000463041 CAMK2N1Q7Z7J9 78 aa2.82□□□□□ -1.96
PTPRF-210ENST00000463041 SEC61GP60059 68 aa2.81□□□□□ -1.96
PTPRF-210ENST00000463041 SERP1Q9Y6X1 66 aa2.81□□□□□ -1.96
PTPRF-210ENST00000463041 LCE3BQ5TA77 95 aa2.8□□□□□ -1.96
PTPRF-210ENST00000463041 COA5Q86WW8 74 aa2.8□□□□□ -1.96
PTPRF-210ENST00000463041 COX7CP15954 63 aa2.77□□□□□ -1.97
PTPRF-210ENST00000463041 DSTQ03001 7570 aaKnown RBP2.76□□□□□ -1.97
PTPRF-210ENST00000463041 A0A1B0GU33 70 aa2.75□□□□□ -1.97
PTPRF-210ENST00000463041 A0A0D9SG42 100 aa2.74□□□□□ -1.97
PTPRF-210ENST00000463041 KRTAP19-7Q3SYF9 63 aa2.73□□□□□ -1.97
PTPRF-210ENST00000463041 SPATA8Q6RVD6 105 aa2.73□□□□□ -1.97
PTPRF-210ENST00000463041 SPINT4Q6UDR6 99 aa2.73□□□□□ -1.97
PTPRF-210ENST00000463041 H7BZZ5 65 aa2.72□□□□□ -1.97
PTPRF-210ENST00000463041 LCE5AQ5TCM9 118 aa2.72□□□□□ -1.97
PTPRF-210ENST00000463041 MT1EP04732 61 aa2.71□□□□□ -1.98
PTPRF-210ENST00000463041 KRTAP12-1P59990 96 aa2.7□□□□□ -1.98
PTPRF-210ENST00000463041 KRTAP19-3Q7Z4W3 81 aa2.7□□□□□ -1.98
PTPRF-210ENST00000463041 SMIM26A0A096LP01 95 aa2.69□□□□□ -1.98
PTPRF-210ENST00000463041 A0A1B0GU69 56 aa2.68□□□□□ -1.98
PTPRF-210ENST00000463041 ANAPC13Q9BS18 74 aa2.68□□□□□ -1.98
PTPRF-210ENST00000463041 CYSTM1Q9H1C7 97 aa2.68□□□□□ -1.98
PTPRF-210ENST00000463041 MT1GP13640 62 aa2.66□□□□□ -1.98
PTPRF-210ENST00000463041 KRTAP19-5Q3LI72 72 aa2.65□□□□□ -1.99
PTPRF-210ENST00000463041 PP632Q6XCG6 107 aa2.63□□□□□ -1.99
PTPRF-210ENST00000463041 A8MU10 97 aa2.62□□□□□ -1.99
PTPRF-210ENST00000463041 CCDC179H3BU77 68 aa2.61□□□□□ -1.99
PTPRF-210ENST00000463041 TNP1P09430 55 aa2.61□□□□□ -1.99
PTPRF-210ENST00000463041 PRR15LQ9BU68 103 aa2.6□□□□□ -1.99
PTPRF-210ENST00000463041 KRTAP4-9Q9BYQ8 210 aa2.6□□□□□ -1.99
PTPRF-210ENST00000463041 GPR98Q8WXG9 6306 aa2.6□□□□□ -1.99
PTPRF-210ENST00000463041 C10orf95Q9H7T3 257 aa2.59□□□□□ -1.99
PTPRF-210ENST00000463041 PCP4P48539 62 aa2.58□□□□□ -2
PTPRF-210ENST00000463041 ATP5EP56381 51 aaPredicted RBP2.58□□□□□ -2
PTPRF-210ENST00000463041 MT1MQ8N339 61 aa2.58□□□□□ -2
PTPRF-210ENST00000463041 MT1LQ93083 61 aa2.58□□□□□ -2
PTPRF-210ENST00000463041 LCE3AQ5TA76 89 aa2.57□□□□□ -2
PTPRF-210ENST00000463041 LCE4AQ5TA78 99 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms