RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 FAM240AA0A1B0GVK7 77 aa8.4□□□□□ -1.06
VARS-220ENST00000461874 UQCRQO14949 82 aa8.38□□□□□ -1.07
VARS-220ENST00000461874 HIST1H4AP62805 103 aaKnown RBP8.37□□□□□ -1.07
VARS-220ENST00000461874 KRTAP10-5P60370 271 aa8.35□□□□□ -1.07
VARS-220ENST00000461874 CRIPTQ9P021 101 aa8.35□□□□□ -1.07
VARS-220ENST00000461874 H0Y9P7 68 aa8.34□□□□□ -1.07
VARS-220ENST00000461874 ATOX1O00244 68 aa8.34□□□□□ -1.07
VARS-220ENST00000461874 IMUPQ9GZP8 106 aa8.32□□□□□ -1.08
VARS-220ENST00000461874 NDUFC1O43677 76 aa8.29□□□□□ -1.08
VARS-220ENST00000461874 NEBP20929 6669 aa8.28□□□□□ -1.08
VARS-220ENST00000461874 H0YAA0 97 aa8.26□□□□□ -1.09
VARS-220ENST00000461874 LINC00643Q86TS7 51 aa8.25□□□□□ -1.09
VARS-220ENST00000461874 A8MUN3 132 aa8.23□□□□□ -1.09
VARS-220ENST00000461874 LINC00208Q96KT6 92 aa8.2□□□□□ -1.1
VARS-220ENST00000461874 MUC12Q9UKN1 5478 aa8.19□□□□□ -1.1
VARS-220ENST00000461874 ADM2Q7Z4H4 148 aa8.16□□□□□ -1.1
VARS-220ENST00000461874 OCR1Q9BZK8 76 aa8.16□□□□□ -1.1
VARS-220ENST00000461874 MP68P56378 58 aa8.14□□□□□ -1.11
VARS-220ENST00000461874 KRTAP5-9P26371 169 aa8.11□□□□□ -1.11
VARS-220ENST00000461874 A0A1B0GV90 55 aa8.09□□□□□ -1.11
VARS-220ENST00000461874 KMT2DO14686 5537 aa8.04□□□□□ -1.12
VARS-220ENST00000461874 H3BPC8 53 aa8.01□□□□□ -1.13
VARS-220ENST00000461874 PRO2289Q9P1D8 64 aa7.98□□□□□ -1.13
VARS-220ENST00000461874 MT1XP80297 61 aa7.97□□□□□ -1.13
VARS-220ENST00000461874 P0C880 135 aa7.96□□□□□ -1.14
VARS-220ENST00000461874 PLAC4Q8WY50 150 aa7.96□□□□□ -1.14
VARS-220ENST00000461874 DMAC1Q96GE9 116 aa7.96□□□□□ -1.14
VARS-220ENST00000461874 R4GN34 69 aa7.96□□□□□ -1.14
VARS-220ENST00000461874 MDN1Q9NU22 5596 aa7.96□□□□□ -1.14
VARS-220ENST00000461874 KRTAP20-1Q3LI63 56 aa7.95□□□□□ -1.14
VARS-220ENST00000461874 J3QR89 54 aa7.94□□□□□ -1.14
VARS-220ENST00000461874 C20orf197Q8N268 126 aa7.94□□□□□ -1.14
VARS-220ENST00000461874 SCGB1A1P11684 91 aa7.92□□□□□ -1.14
VARS-220ENST00000461874 M0QZ58 72 aa7.89□□□□□ -1.15
VARS-220ENST00000461874 KRTAP3-2Q9BYR7 98 aa7.89□□□□□ -1.15
VARS-220ENST00000461874 SPRR2FQ96RM1 72 aa7.83□□□□□ -1.16
VARS-220ENST00000461874 KRTAP12-2P59991 146 aa7.8□□□□□ -1.16
VARS-220ENST00000461874 TRAV7A0A075B6U4 112 aa7.79□□□□□ -1.16
VARS-220ENST00000461874 LINC01554Q52M75 96 aa7.78□□□□□ -1.16
VARS-220ENST00000461874 KRTAP8-1Q8IUC2 63 aa7.77□□□□□ -1.17
VARS-220ENST00000461874 ACYP2P14621 99 aa7.75□□□□□ -1.17
VARS-220ENST00000461874 K7ERU9 68 aa7.74□□□□□ -1.17
VARS-220ENST00000461874 SPRR2EP22531 72 aa7.74□□□□□ -1.17
VARS-220ENST00000461874 SPRR2BP35325 72 aa7.74□□□□□ -1.17
VARS-220ENST00000461874 SPRR2AP35326 72 aa7.74□□□□□ -1.17
VARS-220ENST00000461874 KRTAP2-3P0C7H8 128 aa7.72□□□□□ -1.17
VARS-220ENST00000461874 KRTAP2-4Q9BYR9 128 aa7.72□□□□□ -1.17
VARS-220ENST00000461874 MT-ATP8P03928 68 aa7.69□□□□□ -1.18
VARS-220ENST00000461874 SMIM20Q8N5G0 67 aa7.68□□□□□ -1.18
VARS-220ENST00000461874 SPTSSBQ8NFR3 76 aa7.67□□□□□ -1.18
VARS-220ENST00000461874 KRTAP4-8A0A0G2JLE6 195 aa7.66□□□□□ -1.18
VARS-220ENST00000461874 KRTAP4-8Q9BYQ9 185 aa7.66□□□□□ -1.18
VARS-220ENST00000461874 LCE1AQ5T7P2 110 aa7.64□□□□□ -1.19
VARS-220ENST00000461874 KRTAP10-7P60409 375 aaPredicted RBP7.6□□□□□ -1.19
VARS-220ENST00000461874 CHKB-CPT1BH3BT56 60 aa7.58□□□□□ -1.2
VARS-220ENST00000461874 KRTAP10-12P60413 245 aa7.57□□□□□ -1.2
VARS-220ENST00000461874 SNURFQ9Y675 71 aa7.54□□□□□ -1.2
VARS-220ENST00000461874 SPRR2DP22532 72 aa7.48□□□□□ -1.21
VARS-220ENST00000461874 SPANXA2-OT1Q8N9U9 137 aa7.47□□□□□ -1.21
VARS-220ENST00000461874 KRTAP2-2Q9BYT5 123 aa7.47□□□□□ -1.21
VARS-220ENST00000461874 KRTAP2-1Q9BYU5 128 aa7.47□□□□□ -1.21
VARS-220ENST00000461874 KRTAP13-4Q3LI77 160 aa7.4□□□□□ -1.22
VARS-220ENST00000461874 SERP2Q8N6R1 65 aa7.38□□□□□ -1.23
VARS-220ENST00000461874 LCE3BQ5TA77 95 aa7.29□□□□□ -1.24
VARS-220ENST00000461874 CAMK2N1Q7Z7J9 78 aa7.29□□□□□ -1.24
VARS-220ENST00000461874 COA5Q86WW8 74 aa7.26□□□□□ -1.25
VARS-220ENST00000461874 SEC61GP60059 68 aa7.18□□□□□ -1.26
VARS-220ENST00000461874 SERP1Q9Y6X1 66 aa7.17□□□□□ -1.26
VARS-220ENST00000461874 A0A0D9SG42 100 aa7.15□□□□□ -1.26
VARS-220ENST00000461874 KRTAP19-7Q3SYF9 63 aa7.13□□□□□ -1.27
VARS-220ENST00000461874 COX7CP15954 63 aa7.11□□□□□ -1.27
VARS-220ENST00000461874 SPATA8Q6RVD6 105 aa7.11□□□□□ -1.27
VARS-220ENST00000461874 ANAPC13Q9BS18 74 aa7.09□□□□□ -1.27
VARS-220ENST00000461874 A0A1B0GU33 70 aa7.08□□□□□ -1.28
VARS-220ENST00000461874 MT1EP04732 61 aa7.07□□□□□ -1.28
VARS-220ENST00000461874 PCP4P48539 62 aa7.07□□□□□ -1.28
VARS-220ENST00000461874 LCE5AQ5TCM9 118 aa7.07□□□□□ -1.28
VARS-220ENST00000461874 SPINT4Q6UDR6 99 aa7.05□□□□□ -1.28
VARS-220ENST00000461874 H7BZZ5 65 aa7.04□□□□□ -1.28
VARS-220ENST00000461874 KRTAP19-3Q7Z4W3 81 aa7.03□□□□□ -1.28
VARS-220ENST00000461874 CYSTM1Q9H1C7 97 aa7.03□□□□□ -1.28
VARS-220ENST00000461874 DSTQ03001 7570 aaKnown RBP7.02□□□□□ -1.29
VARS-220ENST00000461874 KRTAP12-1P59990 96 aa7.01□□□□□ -1.29
VARS-220ENST00000461874 KRTAP19-5Q3LI72 72 aa6.92□□□□□ -1.3
VARS-220ENST00000461874 A0A1B0GU69 56 aa6.89□□□□□ -1.31
VARS-220ENST00000461874 SMIM26A0A096LP01 95 aa6.88□□□□□ -1.31
VARS-220ENST00000461874 MT1GP13640 62 aa6.86□□□□□ -1.31
VARS-220ENST00000461874 CCDC179H3BU77 68 aa6.83□□□□□ -1.32
VARS-220ENST00000461874 A8MU10 97 aa6.82□□□□□ -1.32
VARS-220ENST00000461874 KRTAP4-9Q9BYQ8 210 aa6.81□□□□□ -1.32
VARS-220ENST00000461874 PP632Q6XCG6 107 aa6.79□□□□□ -1.32
VARS-220ENST00000461874 GPR98Q8WXG9 6306 aa6.77□□□□□ -1.33
VARS-220ENST00000461874 MT1LQ93083 61 aa6.74□□□□□ -1.33
VARS-220ENST00000461874 MT1MQ8N339 61 aa6.73□□□□□ -1.33
VARS-220ENST00000461874 C10orf95Q9H7T3 257 aa6.72□□□□□ -1.33
VARS-220ENST00000461874 TNP1P09430 55 aa6.7□□□□□ -1.34
VARS-220ENST00000461874 LCE3AQ5TA76 89 aa6.7□□□□□ -1.34
VARS-220ENST00000461874 TMEM258P61165 79 aa6.69□□□□□ -1.34
VARS-220ENST00000461874 ATP5EP56381 51 aaPredicted RBP6.66□□□□□ -1.34
VARS-220ENST00000461874 PRR15LQ9BU68 103 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms