RNA–Protein interactions for RNA: ENST00000461690.5

RPL21-205, Transcript of ribosomal protein L21, human

TSL 5

Gene RPL21, Length 681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPL21-205	ENST00000461690	DNAH1	Q9P2D7	4330 aa		0.5	□□□□□ -2.33
RPL21-205	ENST00000461690	SETD2	Q9BYW2	2564 aa	Predicted RBP	0.5	□□□□□ -2.33
RPL21-205	ENST00000461690	NCOR2	Q9Y618	2525 aa		0.49	□□□□□ -2.33
RPL21-205	ENST00000461690	ACACB	O00763	2458 aa		0.49	□□□□□ -2.33
RPL21-205	ENST00000461690	RIF1	Q5UIP0	2472 aa	Known RBP	0.49	□□□□□ -2.33
RPL21-205	ENST00000461690	SRCAP	Q6ZRS2	3230 aa		0.49	□□□□□ -2.33
RPL21-205	ENST00000461690	SPEN	Q96T58	3664 aa	Known RBP	0.49	□□□□□ -2.33
RPL21-205	ENST00000461690	LAMA3	Q16787	3333 aa		0.49	□□□□□ -2.33
RPL21-205	ENST00000461690	SPRR2B	P35325	72 aa		0.49	□□□□□ -2.33
RPL21-205	ENST00000461690	BRCA2	P51587	3418 aa		0.49	□□□□□ -2.33
RPL21-205	ENST00000461690	RANBP2	P49792	3224 aa	Known RBP	0.49	□□□□□ -2.33
RPL21-205	ENST00000461690	WNK1	Q9H4A3	2382 aa		0.48	□□□□□ -2.33
RPL21-205	ENST00000461690	USP24	Q9UPU5	2620 aa		0.48	□□□□□ -2.33
RPL21-205	ENST00000461690		A0A096LNI7	61 aa		0.48	□□□□□ -2.33
RPL21-205	ENST00000461690	TNP1	P09430	55 aa		0.48	□□□□□ -2.33
RPL21-205	ENST00000461690	DEFB1	P60022	68 aa		0.48	□□□□□ -2.33
RPL21-205	ENST00000461690	TLN1	Q9Y490	2541 aa	Known RBP	0.48	□□□□□ -2.33
RPL21-205	ENST00000461690	CDH23	Q9H251	3354 aa		0.48	□□□□□ -2.33
RPL21-205	ENST00000461690	SZT2	Q5T011	3432 aa		0.47	□□□□□ -2.33
RPL21-205	ENST00000461690	DEFB4A	O15263	64 aa		0.47	□□□□□ -2.33
RPL21-205	ENST00000461690	EYS	Q5T1H1	3165 aa		0.47	□□□□□ -2.33
RPL21-205	ENST00000461690	MKI67	P46013	3256 aa	Known RBP	0.47	□□□□□ -2.33
RPL21-205	ENST00000461690	UNC80	Q8N2C7	3258 aa		0.47	□□□□□ -2.33
RPL21-205	ENST00000461690	ANKRD11	Q6UB99	2663 aa	Predicted RBP	0.47	□□□□□ -2.33
RPL21-205	ENST00000461690	CEP295	Q9C0D2	2601 aa		0.47	□□□□□ -2.33
RPL21-205	ENST00000461690	USP9Y	O00507	2555 aa	Predicted RBP	0.47	□□□□□ -2.33
RPL21-205	ENST00000461690	EPG5	Q9HCE0	2579 aa		0.47	□□□□□ -2.33
RPL21-205	ENST00000461690	XIRP2	A4UGR9	3374 aa		0.46	□□□□□ -2.34
RPL21-205	ENST00000461690	KALRN	O60229	2985 aa		0.46	□□□□□ -2.34
RPL21-205	ENST00000461690	SYNE2	Q8WXH0	6885 aa	Known RBP	0.46	□□□□□ -2.34
RPL21-205	ENST00000461690	FLNB	O75369	2602 aa	Known RBP	0.46	□□□□□ -2.34
RPL21-205	ENST00000461690	MYO18B	Q8IUG5	2567 aa		0.46	□□□□□ -2.34
RPL21-205	ENST00000461690	CRYBG3	Q68DQ2	2970 aa		0.46	□□□□□ -2.34
RPL21-205	ENST00000461690	SPTAN1	Q13813	2472 aa	Known RBP	0.46	□□□□□ -2.34
RPL21-205	ENST00000461690	SPTBN5	Q9NRC6	3674 aa	Known RBP	0.46	□□□□□ -2.34
RPL21-205	ENST00000461690	LRRK2	Q5S007	2527 aa		0.45	□□□□□ -2.34
RPL21-205	ENST00000461690	VCAN	P13611	3396 aa		0.45	□□□□□ -2.34
RPL21-205	ENST00000461690	CENPF	P49454	3210 aa		0.45	□□□□□ -2.34
RPL21-205	ENST00000461690	USP9X	Q93008	2570 aa	Predicted RBP	0.45	□□□□□ -2.34
RPL21-205	ENST00000461690	KRTAP6-2	Q3LI66	62 aa		0.45	□□□□□ -2.34
RPL21-205	ENST00000461690	MUC3A	Q02505	3323 aa		0.45	□□□□□ -2.34
RPL21-205	ENST00000461690	IGSF10	Q6WRI0	2623 aa		0.45	□□□□□ -2.34
RPL21-205	ENST00000461690	MYO9A	B2RTY4	2548 aa		0.44	□□□□□ -2.34
RPL21-205	ENST00000461690	FAT1	Q14517	4588 aa		0.44	□□□□□ -2.34
RPL21-205	ENST00000461690	FRY	Q5TBA9	3013 aa		0.44	□□□□□ -2.34
RPL21-205	ENST00000461690	DNAH12	Q6ZR08	3092 aa		0.44	□□□□□ -2.34
RPL21-205	ENST00000461690	FASN	P49327	2511 aa	Known RBP	0.44	□□□□□ -2.34
RPL21-205	ENST00000461690	DCHS2	Q6V1P9	2916 aa		0.44	□□□□□ -2.34
RPL21-205	ENST00000461690	CFAP54	Q96N23	3096 aa		0.44	□□□□□ -2.34
RPL21-205	ENST00000461690	PRUNE2	Q8WUY3	3088 aa		0.43	□□□□□ -2.34
RPL21-205	ENST00000461690	SPTBN4	Q9H254	2564 aa		0.43	□□□□□ -2.34
RPL21-205	ENST00000461690	USP34	Q70CQ2	3546 aa		0.43	□□□□□ -2.34
RPL21-205	ENST00000461690	WDR87	Q6ZQQ6	2873 aa		0.43	□□□□□ -2.34
RPL21-205	ENST00000461690	C5orf42	Q9H799	3197 aa		0.43	□□□□□ -2.34
RPL21-205	ENST00000461690	CCDC168	Q8NDH2	2452 aa		0.43	□□□□□ -2.34
RPL21-205	ENST00000461690	TEP1	Q99973	2627 aa	Known RBP	0.43	□□□□□ -2.34
RPL21-205	ENST00000461690	ITPR1	Q14643	2758 aa		0.43	□□□□□ -2.34
RPL21-205	ENST00000461690	DMBT1	Q9UGM3	2413 aa	Predicted RBP	0.43	□□□□□ -2.34
RPL21-205	ENST00000461690	DNAH10	Q8IVF4	4471 aa		0.42	□□□□□ -2.34
RPL21-205	ENST00000461690	ITPR3	Q14573	2671 aa		0.42	□□□□□ -2.34
RPL21-205	ENST00000461690	TRIO	O75962	3097 aa		0.42	□□□□□ -2.34
RPL21-205	ENST00000461690	FAT4	Q6V0I7	4981 aa		0.42	□□□□□ -2.34
RPL21-205	ENST00000461690	COL6A5	A8TX70	2615 aa		0.42	□□□□□ -2.34
RPL21-205	ENST00000461690	COL6A3	P12111	3177 aa		0.42	□□□□□ -2.34
RPL21-205	ENST00000461690	FSIP2	Q5CZC0	6907 aa		0.42	□□□□□ -2.34
RPL21-205	ENST00000461690	CFAP46	Q8IYW2	2715 aa		0.42	□□□□□ -2.34
RPL21-205	ENST00000461690	SPG11	Q96JI7	2443 aa		0.42	□□□□□ -2.34
RPL21-205	ENST00000461690	MTOR	P42345	2549 aa		0.42	□□□□□ -2.34
RPL21-205	ENST00000461690	COL12A1	Q99715	3063 aa		0.42	□□□□□ -2.34
RPL21-205	ENST00000461690	FLNA	P21333	2647 aa	Known RBP	0.42	□□□□□ -2.34
RPL21-205	ENST00000461690	FREM2	Q5SZK8	3169 aa		0.42	□□□□□ -2.34
RPL21-205	ENST00000461690	ZFHX4	Q86UP3	3567 aa		0.42	□□□□□ -2.34
RPL21-205	ENST00000461690	DCHS1	Q96JQ0	3298 aa		0.42	□□□□□ -2.34
RPL21-205	ENST00000461690	DNAH14	Q0VDD8	3507 aa		0.42	□□□□□ -2.34
RPL21-205	ENST00000461690	FRYL	O94915	3013 aa		0.41	□□□□□ -2.34
RPL21-205	ENST00000461690	NIPBL	Q6KC79	2804 aa	eCLIP	0.41	□□□□□ -2.34
RPL21-205	ENST00000461690	MT1HL1	P0DM35	61 aa		0.41	□□□□□ -2.34
RPL21-205	ENST00000461690	WDFY4	Q6ZS81	3184 aa		0.41	□□□□□ -2.34
RPL21-205	ENST00000461690	TLN2	Q9Y4G6	2542 aa		0.41	□□□□□ -2.34
RPL21-205	ENST00000461690	HIVEP1	P15822	2718 aa		0.41	□□□□□ -2.34
RPL21-205	ENST00000461690	MYO15A	Q9UKN7	3530 aa		0.41	□□□□□ -2.34
RPL21-205	ENST00000461690	SPEG	Q15772	3267 aa		0.4	□□□□□ -2.34
RPL21-205	ENST00000461690	SON	P18583	2426 aa	Known RBP	0.4	□□□□□ -2.34
RPL21-205	ENST00000461690	NBEAL2	Q6ZNJ1	2754 aa		0.4	□□□□□ -2.34
RPL21-205	ENST00000461690	LAMA5	O15230	3695 aa		0.4	□□□□□ -2.35
RPL21-205	ENST00000461690	ATM	Q13315	3056 aa		0.4	□□□□□ -2.35
RPL21-205	ENST00000461690	ADGRG4	Q8IZF6	3080 aa		0.4	□□□□□ -2.35
RPL21-205	ENST00000461690	DMXL2	Q8TDJ6	3036 aa		0.4	□□□□□ -2.35
RPL21-205	ENST00000461690	SMR3B	P02814	79 aa	Predicted RBP	0.4	□□□□□ -2.35
RPL21-205	ENST00000461690	SPRR2A	P35326	72 aa		0.4	□□□□□ -2.35
RPL21-205	ENST00000461690	TENM2	Q9NT68	2774 aa		0.4	□□□□□ -2.35
RPL21-205	ENST00000461690	WDFY3	Q8IZQ1	3526 aa		0.4	□□□□□ -2.35
RPL21-205	ENST00000461690	MGA	Q8IWI9	3026 aa		0.4	□□□□□ -2.35
RPL21-205	ENST00000461690	MGAM2	Q2M2H8	2515 aa		0.39	□□□□□ -2.35
RPL21-205	ENST00000461690	MAST4	O15021	2626 aa		0.39	□□□□□ -2.35
RPL21-205	ENST00000461690	MAP1A	P78559	2803 aa	Predicted RBP	0.39	□□□□□ -2.35
RPL21-205	ENST00000461690	LAMA2	P24043	3122 aa	Known RBP	0.39	□□□□□ -2.35
RPL21-205	ENST00000461690	LOC400499	M0QZD8	3231 aa		0.39	□□□□□ -2.35
RPL21-205	ENST00000461690	LAMA1	P25391	3075 aa		0.39	□□□□□ -2.35
RPL21-205	ENST00000461690	HMCN2	Q8NDA2	5059 aa		0.39	□□□□□ -2.35

Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms