RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 J3QL48 77 aa7.54□□□□□ -1.2
NCL-207ENST00000461347 M0QZ58 72 aa7.54□□□□□ -1.2
NCL-207ENST00000461347 P0C880 135 aa7.49□□□□□ -1.21
NCL-207ENST00000461347 CAMK2N1Q7Z7J9 78 aa7.48□□□□□ -1.21
NCL-207ENST00000461347 XP32Q5T750 250 aa7.46□□□□□ -1.21
NCL-207ENST00000461347 RYR2Q92736 4967 aa7.39□□□□□ -1.23
NCL-207ENST00000461347 PKHD1L1Q86WI1 4243 aa7.36□□□□□ -1.23
NCL-207ENST00000461347 SEC61BP60468 96 aaKnown RBP7.34□□□□□ -1.23
NCL-207ENST00000461347 PKHD1P08F94 4074 aa7.31□□□□□ -1.24
NCL-207ENST00000461347 A0A1B0GVY2 172 aa7.3□□□□□ -1.24
NCL-207ENST00000461347 KMT2CQ8NEZ4 4911 aaKnown RBP7.28□□□□□ -1.24
NCL-207ENST00000461347 KRTAP13-4Q3LI77 160 aa7.28□□□□□ -1.24
NCL-207ENST00000461347 KRTAP10-8P60410 259 aa7.28□□□□□ -1.24
NCL-207ENST00000461347 DYNC1H1Q14204 4646 aaKnown RBP7.26□□□□□ -1.25
NCL-207ENST00000461347 KRTAP10-6P60371 365 aaPredicted RBP7.26□□□□□ -1.25
NCL-207ENST00000461347 LRP1BQ9NZR2 4599 aa7.23□□□□□ -1.25
NCL-207ENST00000461347 KRTAP12-2P59991 146 aa7.23□□□□□ -1.25
NCL-207ENST00000461347 TPRXLQ17RH7 258 aa7.23□□□□□ -1.25
NCL-207ENST00000461347 APOBP04114 4563 aaKnown RBP7.23□□□□□ -1.25
NCL-207ENST00000461347 VPS13BQ7Z7G8 4022 aa7.21□□□□□ -1.26
NCL-207ENST00000461347 RYR3Q15413 4870 aa7.19□□□□□ -1.26
NCL-207ENST00000461347 KRTAP12-1P59990 96 aa7.13□□□□□ -1.27
NCL-207ENST00000461347 KRTAP3-3Q9BYR6 98 aa7.13□□□□□ -1.27
NCL-207ENST00000461347 KRTAP10-4P60372 401 aaPredicted RBP7.11□□□□□ -1.27
NCL-207ENST00000461347 KRTAP3-2Q9BYR7 98 aa7.1□□□□□ -1.27
NCL-207ENST00000461347 FAT1Q14517 4588 aa7.08□□□□□ -1.28
NCL-207ENST00000461347 M0R2T5 61 aa7.06□□□□□ -1.28
NCL-207ENST00000461347 PLAC4Q8WY50 150 aa7.03□□□□□ -1.28
NCL-207ENST00000461347 HSPG2P98160 4391 aa7.02□□□□□ -1.29
NCL-207ENST00000461347 FAT3Q8TDW7 4589 aa6.98□□□□□ -1.29
NCL-207ENST00000461347 KRTAP15-1Q3LI76 137 aa6.94□□□□□ -1.3
NCL-207ENST00000461347 TNXBP22105 4242 aa6.94□□□□□ -1.3
NCL-207ENST00000461347 RYR1P21817 5038 aa6.9□□□□□ -1.3
NCL-207ENST00000461347 TNP1P09430 55 aa6.89□□□□□ -1.31
NCL-207ENST00000461347 MT1HL1P0DM35 61 aa6.88□□□□□ -1.31
NCL-207ENST00000461347 PP632Q6XCG6 107 aa6.86□□□□□ -1.31
NCL-207ENST00000461347 EPPK1P58107 5090 aaKnown RBP6.85□□□□□ -1.31
NCL-207ENST00000461347 MYCBP2O75592 4640 aa6.84□□□□□ -1.31
NCL-207ENST00000461347 KRTAP17-1Q9BYP8 105 aa6.79□□□□□ -1.32
NCL-207ENST00000461347 LRP1Q07954 4544 aaKnown RBP6.68□□□□□ -1.34
NCL-207ENST00000461347 KIAA1109Q2LD37 5005 aa6.63□□□□□ -1.35
NCL-207ENST00000461347 LORP23490 312 aaPredicted RBP6.62□□□□□ -1.35
NCL-207ENST00000461347 KRTAP4-5Q9BYR2 181 aa6.59□□□□□ -1.35
NCL-207ENST00000461347 HERC2O95714 4834 aa6.57□□□□□ -1.36
NCL-207ENST00000461347 BIRC6Q9NR09 4857 aa6.53□□□□□ -1.36
NCL-207ENST00000461347 ABCA13Q86UQ4 5058 aa6.53□□□□□ -1.36
NCL-207ENST00000461347 KRTAP10-10P60014 251 aa6.48□□□□□ -1.37
NCL-207ENST00000461347 LRP2P98164 4655 aa6.4□□□□□ -1.38
NCL-207ENST00000461347 KRTAP4-1Q9BYQ7 146 aa6.38□□□□□ -1.39
NCL-207ENST00000461347 MUC17Q685J3 4493 aa6.35□□□□□ -1.39
NCL-207ENST00000461347 PCLOQ9Y6V0 5065 aa6.23□□□□□ -1.41
NCL-207ENST00000461347 LPAP08519 4548 aa6.23□□□□□ -1.41
NCL-207ENST00000461347 HMCN2Q8NDA2 5059 aa6.1□□□□□ -1.43
NCL-207ENST00000461347 PRO2289Q9P1D8 64 aa6.08□□□□□ -1.44
NCL-207ENST00000461347 LCE3AQ5TA76 89 aa6.08□□□□□ -1.44
NCL-207ENST00000461347 KRTAP23-1A1A580 65 aa6.07□□□□□ -1.44
NCL-207ENST00000461347 HERC1Q15751 4861 aa6□□□□□ -1.45
NCL-207ENST00000461347 KRTAP19-2Q3LHN2 52 aa5.96□□□□□ -1.46
NCL-207ENST00000461347 KRTAP10-12P60413 245 aa5.95□□□□□ -1.46
NCL-207ENST00000461347 FLGP20930 4061 aaPredicted RBP5.93□□□□□ -1.46
NCL-207ENST00000461347 KRTAP12-3P60328 96 aa5.91□□□□□ -1.46
NCL-207ENST00000461347 SPRR2GQ9BYE4 73 aa5.88□□□□□ -1.47
NCL-207ENST00000461347 INE1O15225 51 aa5.85□□□□□ -1.47
NCL-207ENST00000461347 MT1HP80294 61 aa5.8□□□□□ -1.48
NCL-207ENST00000461347 MT2AP02795 61 aa5.8□□□□□ -1.48
NCL-207ENST00000461347 KRTAP19-1Q8IUB9 90 aa5.79□□□□□ -1.48
NCL-207ENST00000461347 MT1FP04733 61 aa5.78□□□□□ -1.48
NCL-207ENST00000461347 MUC2Q02817 5179 aa5.74□□□□□ -1.49
NCL-207ENST00000461347 LCE2CQ5TA81 110 aa5.67□□□□□ -1.5
NCL-207ENST00000461347 KRTAP8-1Q8IUC2 63 aa5.67□□□□□ -1.5
NCL-207ENST00000461347 RNF213Q63HN8 5207 aa5.66□□□□□ -1.5
NCL-207ENST00000461347 SPRR5A0A1B0GTR4 108 aa5.65□□□□□ -1.51
NCL-207ENST00000461347 UBR4Q5T4S7 5183 aa5.64□□□□□ -1.51
NCL-207ENST00000461347 KRTAP19-8Q3LI54 63 aa5.52□□□□□ -1.53
NCL-207ENST00000461347 KRTAP10-7P60409 375 aaPredicted RBP5.5□□□□□ -1.53
NCL-207ENST00000461347 FAT4Q6V0I7 4981 aa5.5□□□□□ -1.53
NCL-207ENST00000461347 MT1XP80297 61 aa5.5□□□□□ -1.53
NCL-207ENST00000461347 KRTAP9-8Q9BYQ0 159 aa5.48□□□□□ -1.53
NCL-207ENST00000461347 MT1BP07438 61 aa5.48□□□□□ -1.53
NCL-207ENST00000461347 KRTAP10-5P60370 271 aa5.47□□□□□ -1.53
NCL-207ENST00000461347 KRTAP19-5Q3LI72 72 aa5.45□□□□□ -1.54
NCL-207ENST00000461347 CRCT1Q9UGL9 99 aa5.37□□□□□ -1.55
NCL-207ENST00000461347 LCE3CQ5T5A8 94 aa5.36□□□□□ -1.55
NCL-207ENST00000461347 LCE2AQ5TA79 106 aaPredicted RBP5.3□□□□□ -1.56
NCL-207ENST00000461347 KRTAP9-3Q9BYQ3 159 aa5.26□□□□□ -1.57
NCL-207ENST00000461347 KRTAP4-8A0A0G2JLE6 195 aa5.23□□□□□ -1.57
NCL-207ENST00000461347 KRTAP4-8Q9BYQ9 185 aa5.23□□□□□ -1.57
NCL-207ENST00000461347 LCE2BO14633 110 aa5.08□□□□□ -1.6
NCL-207ENST00000461347 KRTAP4-7Q9BYR0 210 aa5.06□□□□□ -1.6
NCL-207ENST00000461347 OBSCNQ5VST9 7968 aa5.04□□□□□ -1.6
NCL-207ENST00000461347 SYNE1Q8NF91 8797 aaKnown RBP5.01□□□□□ -1.61
NCL-207ENST00000461347 FSIP2Q5CZC0 6907 aa4.94□□□□□ -1.62
NCL-207ENST00000461347 KRTAP19-4Q3LI73 84 aa4.89□□□□□ -1.63
NCL-207ENST00000461347 MT1GP13640 62 aa4.85□□□□□ -1.63
NCL-207ENST00000461347 MT1LQ93083 61 aa4.85□□□□□ -1.63
NCL-207ENST00000461347 USH2AO75445 5202 aa4.84□□□□□ -1.63
NCL-207ENST00000461347 KMT2DO14686 5537 aa4.82□□□□□ -1.64
NCL-207ENST00000461347 KRTAP19-7Q3SYF9 63 aa4.81□□□□□ -1.64
NCL-207ENST00000461347 MT1EP04732 61 aa4.8□□□□□ -1.64
NCL-207ENST00000461347 SSPOA2VEC9 5147 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms