RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 ITPR3Q14573 2671 aa-0.15□□□□□ -2.43
SPTLC1-203ENST00000461132 DNAH6Q9C0G6 4158 aa-0.15□□□□□ -2.43
SPTLC1-203ENST00000461132 UBR4Q5T4S7 5183 aa-0.15□□□□□ -2.43
SPTLC1-203ENST00000461132 PKHD1L1Q86WI1 4243 aa-0.15□□□□□ -2.43
SPTLC1-203ENST00000461132 DNAH3Q8TD57 4116 aa-0.15□□□□□ -2.43
SPTLC1-203ENST00000461132 VPS13BQ7Z7G8 4022 aa-0.16□□□□□ -2.43
SPTLC1-203ENST00000461132 SACSQ9NZJ4 4579 aa-0.16□□□□□ -2.43
SPTLC1-203ENST00000461132 LAMA5O15230 3695 aa-0.16□□□□□ -2.43
SPTLC1-203ENST00000461132 ANK3Q12955 4377 aaKnown RBP-0.16□□□□□ -2.43
SPTLC1-203ENST00000461132 KRTAP19-8Q3LI54 63 aa-0.16□□□□□ -2.44
SPTLC1-203ENST00000461132 KRTAP8-1Q8IUC2 63 aa-0.16□□□□□ -2.44
SPTLC1-203ENST00000461132 FAT1Q14517 4588 aa-0.16□□□□□ -2.44
SPTLC1-203ENST00000461132 NBPF19A0A087WUL8 3843 aa-0.16□□□□□ -2.44
SPTLC1-203ENST00000461132 CUBNO60494 3623 aa-0.17□□□□□ -2.44
SPTLC1-203ENST00000461132 WDR87Q6ZQQ6 2873 aa-0.17□□□□□ -2.44
SPTLC1-203ENST00000461132 APOBP04114 4563 aaKnown RBP-0.17□□□□□ -2.44
SPTLC1-203ENST00000461132 COL6A5A8TX70 2615 aa-0.18□□□□□ -2.44
SPTLC1-203ENST00000461132 KALRNO60229 2985 aa-0.18□□□□□ -2.44
SPTLC1-203ENST00000461132 HTTP42858 3142 aa-0.18□□□□□ -2.44
SPTLC1-203ENST00000461132 AKAP9Q99996 3911 aa-0.19□□□□□ -2.44
SPTLC1-203ENST00000461132 STARD9Q9P2P6 4700 aa-0.19□□□□□ -2.44
SPTLC1-203ENST00000461132 VPS13DQ5THJ4 4388 aa-0.19□□□□□ -2.44
SPTLC1-203ENST00000461132 MUC17Q685J3 4493 aa-0.19□□□□□ -2.44
SPTLC1-203ENST00000461132 LAMA1P25391 3075 aa-0.19□□□□□ -2.44
SPTLC1-203ENST00000461132 USH2AO75445 5202 aa-0.2□□□□□ -2.44
SPTLC1-203ENST00000461132 DNAH11Q96DT5 4516 aa-0.2□□□□□ -2.44
SPTLC1-203ENST00000461132 DNAH8Q96JB1 4490 aa-0.2□□□□□ -2.44
SPTLC1-203ENST00000461132 ITPR1Q14643 2758 aa-0.2□□□□□ -2.44
SPTLC1-203ENST00000461132 USP9YO00507 2555 aaPredicted RBP-0.2□□□□□ -2.44
SPTLC1-203ENST00000461132 DNAH1Q9P2D7 4330 aa-0.2□□□□□ -2.44
SPTLC1-203ENST00000461132 DNAH2Q9P225 4427 aa-0.2□□□□□ -2.44
SPTLC1-203ENST00000461132 EPPK1P58107 5090 aaKnown RBP-0.21□□□□□ -2.44
SPTLC1-203ENST00000461132 TLN2Q9Y4G6 2542 aa-0.22□□□□□ -2.44
SPTLC1-203ENST00000461132 KRTAP19-5Q3LI72 72 aa-0.22□□□□□ -2.44
SPTLC1-203ENST00000461132 MT4P47944 62 aa-0.23□□□□□ -2.45
SPTLC1-203ENST00000461132 MT1HP80294 61 aa-0.23□□□□□ -2.45
SPTLC1-203ENST00000461132 HERC2O95714 4834 aa-0.23□□□□□ -2.45
SPTLC1-203ENST00000461132 USP9XQ93008 2570 aaPredicted RBP-0.23□□□□□ -2.45
SPTLC1-203ENST00000461132 SMR3BP02814 79 aaPredicted RBP-0.24□□□□□ -2.45
SPTLC1-203ENST00000461132 KRTAP20-2Q3LI61 65 aa-0.24□□□□□ -2.45
SPTLC1-203ENST00000461132 RYR1P21817 5038 aa-0.25□□□□□ -2.45
SPTLC1-203ENST00000461132 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.25□□□□□ -2.45
SPTLC1-203ENST00000461132 TEX15Q9BXT5 2789 aa-0.25□□□□□ -2.45
SPTLC1-203ENST00000461132 BIRC6Q9NR09 4857 aa-0.26□□□□□ -2.45
SPTLC1-203ENST00000461132 RYR3Q15413 4870 aa-0.26□□□□□ -2.45
SPTLC1-203ENST00000461132 FRYQ5TBA9 3013 aa-0.27□□□□□ -2.45
SPTLC1-203ENST00000461132 PLECQ15149 4684 aaKnown RBP-0.27□□□□□ -2.45
SPTLC1-203ENST00000461132 RANBP2P49792 3224 aaKnown RBP-0.27□□□□□ -2.45
SPTLC1-203ENST00000461132 ATP7AQ04656 1500 aa-0.28□□□□□ -2.45
SPTLC1-203ENST00000461132 A0A0C4DFX4 3053 aa-0.28□□□□□ -2.45
SPTLC1-203ENST00000461132 HYDINQ4G0P3 5121 aa-0.29□□□□□ -2.46
SPTLC1-203ENST00000461132 TRIOO75962 3097 aa-0.29□□□□□ -2.46
SPTLC1-203ENST00000461132 SAMD9LQ8IVG5 1584 aa-0.29□□□□□ -2.46
SPTLC1-203ENST00000461132 KIAA1109Q2LD37 5005 aa-0.29□□□□□ -2.46
SPTLC1-203ENST00000461132 C5orf42Q9H799 3197 aa-0.3□□□□□ -2.46
SPTLC1-203ENST00000461132 RNF213Q63HN8 5207 aa-0.3□□□□□ -2.46
SPTLC1-203ENST00000461132 COL12A1Q99715 3063 aa-0.3□□□□□ -2.46
SPTLC1-203ENST00000461132 DNAH7Q8WXX0 4024 aa-0.31□□□□□ -2.46
SPTLC1-203ENST00000461132 MT1EP04732 61 aa-0.31□□□□□ -2.46
SPTLC1-203ENST00000461132 LRBAP50851 2863 aa-0.31□□□□□ -2.46
SPTLC1-203ENST00000461132 DNHD1Q96M86 4753 aa-0.31□□□□□ -2.46
SPTLC1-203ENST00000461132 SPTAN1Q13813 2472 aaKnown RBP-0.31□□□□□ -2.46
SPTLC1-203ENST00000461132 CMYA5Q8N3K9 4069 aa-0.32□□□□□ -2.46
SPTLC1-203ENST00000461132 DNAH17Q9UFH2 4485 aa-0.32□□□□□ -2.46
SPTLC1-203ENST00000461132 DYNC1H1Q14204 4646 aaKnown RBP-0.32□□□□□ -2.46
SPTLC1-203ENST00000461132 MT1XP80297 61 aa-0.32□□□□□ -2.46
SPTLC1-203ENST00000461132 CELSR3Q9NYQ7 3312 aa-0.32□□□□□ -2.46
SPTLC1-203ENST00000461132 CFAP46Q8IYW2 2715 aa-0.33□□□□□ -2.46
SPTLC1-203ENST00000461132 NIPBLQ6KC79 2804 aaeCLIP-0.33□□□□□ -2.46
SPTLC1-203ENST00000461132 MYO9AB2RTY4 2548 aa-0.33□□□□□ -2.46
SPTLC1-203ENST00000461132 TRRAPQ9Y4A5 3859 aa-0.34□□□□□ -2.46
SPTLC1-203ENST00000461132 DOPEY1Q5JWR5 2465 aa-0.34□□□□□ -2.46
SPTLC1-203ENST00000461132 MT1LQ93083 61 aa-0.34□□□□□ -2.46
SPTLC1-203ENST00000461132 RYR2Q92736 4967 aa-0.34□□□□□ -2.46
SPTLC1-203ENST00000461132 CEP295Q9C0D2 2601 aa-0.35□□□□□ -2.47
SPTLC1-203ENST00000461132 TOMM7Q9P0U1 55 aa-0.35□□□□□ -2.47
SPTLC1-203ENST00000461132 CHD7Q9P2D1 2997 aa-0.35□□□□□ -2.47
SPTLC1-203ENST00000461132 DNAH10Q8IVF4 4471 aa-0.36□□□□□ -2.47
SPTLC1-203ENST00000461132 LEAP2Q969E1 77 aa-0.36□□□□□ -2.47
SPTLC1-203ENST00000461132 ADGRG4Q8IZF6 3080 aa-0.36□□□□□ -2.47
SPTLC1-203ENST00000461132 SPENQ96T58 3664 aaKnown RBP-0.36□□□□□ -2.47
SPTLC1-203ENST00000461132 TOP2AP11388 1531 aaKnown RBP-0.37□□□□□ -2.47
SPTLC1-203ENST00000461132 ITPR2Q14571 2701 aa-0.37□□□□□ -2.47
SPTLC1-203ENST00000461132 MGAQ8IWI9 3026 aa-0.38□□□□□ -2.47
SPTLC1-203ENST00000461132 MT1HL1P0DM35 61 aa-0.38□□□□□ -2.47
SPTLC1-203ENST00000461132 ABCA13Q86UQ4 5058 aa-0.38□□□□□ -2.47
SPTLC1-203ENST00000461132 LAMA2P24043 3122 aaKnown RBP-0.39□□□□□ -2.47
SPTLC1-203ENST00000461132 DNAH5Q8TE73 4624 aa-0.39□□□□□ -2.47
SPTLC1-203ENST00000461132 RELNP78509 3460 aa-0.39□□□□□ -2.47
SPTLC1-203ENST00000461132 SPTBN5Q9NRC6 3674 aaKnown RBP-0.4□□□□□ -2.47
SPTLC1-203ENST00000461132 LAMA3Q16787 3333 aa-0.4□□□□□ -2.47
SPTLC1-203ENST00000461132 RPL39P62891 51 aaKnown RBP-0.41□□□□□ -2.48
SPTLC1-203ENST00000461132 DEFB136Q30KP8 78 aa-0.41□□□□□ -2.48
SPTLC1-203ENST00000461132 CSMD1Q96PZ7 3565 aa-0.42□□□□□ -2.48
SPTLC1-203ENST00000461132 CRYBG3Q68DQ2 2970 aa-0.42□□□□□ -2.48
SPTLC1-203ENST00000461132 SRCAPQ6ZRS2 3230 aa-0.43□□□□□ -2.48
SPTLC1-203ENST00000461132 LINC01590Q5TEZ4 76 aa-0.43□□□□□ -2.48
SPTLC1-203ENST00000461132 MT1MQ8N339 61 aa-0.43□□□□□ -2.48
SPTLC1-203ENST00000461132 MT2AP02795 61 aa-0.44□□□□□ -2.48
SPTLC1-203ENST00000461132 MT1GP13640 62 aa-0.44□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms