RNA–Protein interactions for RNA: ENST00000460500.1

SSX2IP-205, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 5

Gene SSX2IP, Length 2,116 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-205ENST00000460500 ANK3Q12955 4377 aaKnown RBP2.05□□□□□ -2.08
SSX2IP-205ENST00000460500 LRRK2Q5S007 2527 aa2.05□□□□□ -2.08
SSX2IP-205ENST00000460500 HIVEP3Q5T1R4 2406 aa2.05□□□□□ -2.08
SSX2IP-205ENST00000460500 USP9YO00507 2555 aaPredicted RBP2.05□□□□□ -2.08
SSX2IP-205ENST00000460500 NOTCH2Q04721 2471 aa2.04□□□□□ -2.08
SSX2IP-205ENST00000460500 DOPEY1Q5JWR5 2465 aa2.04□□□□□ -2.08
SSX2IP-205ENST00000460500 TEP1Q99973 2627 aaKnown RBP2.04□□□□□ -2.08
SSX2IP-205ENST00000460500 CSMD2Q7Z408 3487 aa2.03□□□□□ -2.08
SSX2IP-205ENST00000460500 CSMD3Q7Z407 3707 aa2.03□□□□□ -2.08
SSX2IP-205ENST00000460500 DMBT1Q9UGM3 2413 aaPredicted RBP2.02□□□□□ -2.09
SSX2IP-205ENST00000460500 CUBNO60494 3623 aa2.01□□□□□ -2.09
SSX2IP-205ENST00000460500 VPS13DQ5THJ4 4388 aa2.01□□□□□ -2.09
SSX2IP-205ENST00000460500 CCDC168Q8NDH2 2452 aa2.01□□□□□ -2.09
SSX2IP-205ENST00000460500 TRRAPQ9Y4A5 3859 aa2.01□□□□□ -2.09
SSX2IP-205ENST00000460500 NBEAL2Q6ZNJ1 2754 aa2□□□□□ -2.09
SSX2IP-205ENST00000460500 M0QZ58 72 aa2□□□□□ -2.09
SSX2IP-205ENST00000460500 POLQO75417 2590 aa2□□□□□ -2.09
SSX2IP-205ENST00000460500 COL6A5A8TX70 2615 aa2□□□□□ -2.09
SSX2IP-205ENST00000460500 FLNCQ14315 2725 aa2□□□□□ -2.09
SSX2IP-205ENST00000460500 FBN2P35556 2912 aa2□□□□□ -2.09
SSX2IP-205ENST00000460500 SETD2Q9BYW2 2564 aaPredicted RBP2□□□□□ -2.09
SSX2IP-205ENST00000460500 FRAS1Q86XX4 4008 aa1.99□□□□□ -2.09
SSX2IP-205ENST00000460500 SONP18583 2426 aaKnown RBP1.99□□□□□ -2.09
SSX2IP-205ENST00000460500 LCE3EQ5T5B0 92 aa1.99□□□□□ -2.09
SSX2IP-205ENST00000460500 ITPR2Q14571 2701 aa1.98□□□□□ -2.09
SSX2IP-205ENST00000460500 MTORP42345 2549 aa1.98□□□□□ -2.09
SSX2IP-205ENST00000460500 MXRA5Q9NR99 2828 aa1.97□□□□□ -2.09
SSX2IP-205ENST00000460500 ATRQ13535 2644 aa1.97□□□□□ -2.09
SSX2IP-205ENST00000460500 NIPBLQ6KC79 2804 aaeCLIP1.97□□□□□ -2.09
SSX2IP-205ENST00000460500 FBN3Q75N90 2809 aa1.97□□□□□ -2.09
SSX2IP-205ENST00000460500 DNHD1Q96M86 4753 aa1.97□□□□□ -2.09
SSX2IP-205ENST00000460500 ANK2Q01484 3957 aa1.97□□□□□ -2.09
SSX2IP-205ENST00000460500 DNAH8Q96JB1 4490 aa1.96□□□□□ -2.1
SSX2IP-205ENST00000460500 HIVEP1P15822 2718 aa1.95□□□□□ -2.1
SSX2IP-205ENST00000460500 ITPR3Q14573 2671 aa1.95□□□□□ -2.1
SSX2IP-205ENST00000460500 PDZD2O15018 2839 aa1.95□□□□□ -2.1
SSX2IP-205ENST00000460500 CENPEQ02224 2701 aa1.93□□□□□ -2.1
SSX2IP-205ENST00000460500 RPS29P62273 56 aaKnown RBP1.93□□□□□ -2.1
SSX2IP-205ENST00000460500 LYSTQ99698 3801 aa1.92□□□□□ -2.1
SSX2IP-205ENST00000460500 SMR3AQ99954 134 aa1.91□□□□□ -2.1
SSX2IP-205ENST00000460500 DNAH17Q9UFH2 4485 aa1.91□□□□□ -2.1
SSX2IP-205ENST00000460500 DNAH10Q8IVF4 4471 aa1.89□□□□□ -2.11
SSX2IP-205ENST00000460500 TGP01266 2768 aa1.89□□□□□ -2.11
SSX2IP-205ENST00000460500 DYNC2H1Q8NCM8 4307 aaKnown RBP1.89□□□□□ -2.11
SSX2IP-205ENST00000460500 NBEAL1Q6ZS30 2694 aa1.89□□□□□ -2.11
SSX2IP-205ENST00000460500 ZANQ9Y493 2812 aa1.89□□□□□ -2.11
SSX2IP-205ENST00000460500 DNAH11Q96DT5 4516 aa1.89□□□□□ -2.11
SSX2IP-205ENST00000460500 NSD1Q96L73 2696 aaPredicted RBP1.88□□□□□ -2.11
SSX2IP-205ENST00000460500 ACANP16112 2415 aa1.88□□□□□ -2.11
SSX2IP-205ENST00000460500 FLNAP21333 2647 aaKnown RBP1.88□□□□□ -2.11
SSX2IP-205ENST00000460500 LCE3DQ9BYE3 92 aa1.87□□□□□ -2.11
SSX2IP-205ENST00000460500 PRKDCP78527 4128 aaKnown RBP1.87□□□□□ -2.11
SSX2IP-205ENST00000460500 COL7A1Q02388 2944 aa1.86□□□□□ -2.11
SSX2IP-205ENST00000460500 MYCBP2O75592 4640 aa1.86□□□□□ -2.11
SSX2IP-205ENST00000460500 DNAH3Q8TD57 4116 aa1.86□□□□□ -2.11
SSX2IP-205ENST00000460500 DNAH9Q9NYC9 4486 aa1.86□□□□□ -2.11
SSX2IP-205ENST00000460500 ZNF469Q96JG9 3925 aaPredicted RBP1.86□□□□□ -2.11
SSX2IP-205ENST00000460500 DNAH7Q8WXX0 4024 aa1.86□□□□□ -2.11
SSX2IP-205ENST00000460500 PKD1L1Q8TDX9 2849 aa1.85□□□□□ -2.11
SSX2IP-205ENST00000460500 STAB1Q9NY15 2570 aa1.85□□□□□ -2.11
SSX2IP-205ENST00000460500 DNAH6Q9C0G6 4158 aa1.85□□□□□ -2.11
SSX2IP-205ENST00000460500 LCE3AQ5TA76 89 aa1.82□□□□□ -2.12
SSX2IP-205ENST00000460500 KRTAP10-4P60372 401 aaPredicted RBP1.82□□□□□ -2.12
SSX2IP-205ENST00000460500 TENM3Q9P273 2699 aa1.82□□□□□ -2.12
SSX2IP-205ENST00000460500 STAB2Q8WWQ8 2551 aa1.81□□□□□ -2.12
SSX2IP-205ENST00000460500 KMT2AQ03164 3969 aa1.81□□□□□ -2.12
SSX2IP-205ENST00000460500 CMYA5Q8N3K9 4069 aa1.81□□□□□ -2.12
SSX2IP-205ENST00000460500 DNAH2Q9P225 4427 aa1.81□□□□□ -2.12
SSX2IP-205ENST00000460500 HUWE1Q7Z6Z7 4374 aaKnown RBP1.79□□□□□ -2.12
SSX2IP-205ENST00000460500 C9orf92A6NGG3 77 aa1.79□□□□□ -2.12
SSX2IP-205ENST00000460500 TNP1P09430 55 aa1.79□□□□□ -2.12
SSX2IP-205ENST00000460500 HECTD4Q9Y4D8 3996 aa1.78□□□□□ -2.12
SSX2IP-205ENST00000460500 KRTAP12-3P60328 96 aa1.77□□□□□ -2.13
SSX2IP-205ENST00000460500 MGAM2Q2M2H8 2515 aa1.76□□□□□ -2.13
SSX2IP-205ENST00000460500 NOTCH1P46531 2555 aa1.76□□□□□ -2.13
SSX2IP-205ENST00000460500 BIRC6Q9NR09 4857 aa1.75□□□□□ -2.13
SSX2IP-205ENST00000460500 MUC5BQ9HC84 5762 aaPredicted RBP1.75□□□□□ -2.13
SSX2IP-205ENST00000460500 SACSQ9NZJ4 4579 aa1.74□□□□□ -2.13
SSX2IP-205ENST00000460500 RYR3Q15413 4870 aa1.72□□□□□ -2.13
SSX2IP-205ENST00000460500 APOBP04114 4563 aaKnown RBP1.72□□□□□ -2.13
SSX2IP-205ENST00000460500 M0R2T5 61 aa1.72□□□□□ -2.13
SSX2IP-205ENST00000460500 KRTAP2-3P0C7H8 128 aa1.72□□□□□ -2.13
SSX2IP-205ENST00000460500 KRTAP2-4Q9BYR9 128 aa1.72□□□□□ -2.13
SSX2IP-205ENST00000460500 KRTAP2-1Q9BYU5 128 aa1.72□□□□□ -2.13
SSX2IP-205ENST00000460500 KMT2CQ8NEZ4 4911 aaKnown RBP1.71□□□□□ -2.13
SSX2IP-205ENST00000460500 PKHD1L1Q86WI1 4243 aa1.71□□□□□ -2.14
SSX2IP-205ENST00000460500 TENM1Q9UKZ4 2725 aa1.7□□□□□ -2.14
SSX2IP-205ENST00000460500 RYR2Q92736 4967 aa1.69□□□□□ -2.14
SSX2IP-205ENST00000460500 KRTAP5-5Q701N2 237 aaPredicted RBP1.69□□□□□ -2.14
SSX2IP-205ENST00000460500 LRP1Q07954 4544 aaKnown RBP1.68□□□□□ -2.14
SSX2IP-205ENST00000460500 PKD1P98161 4303 aa1.67□□□□□ -2.14
SSX2IP-205ENST00000460500 EPPK1P58107 5090 aaKnown RBP1.66□□□□□ -2.14
SSX2IP-205ENST00000460500 HERC2O95714 4834 aa1.66□□□□□ -2.14
SSX2IP-205ENST00000460500 FAT2Q9NYQ8 4349 aa1.65□□□□□ -2.14
SSX2IP-205ENST00000460500 PLECQ15149 4684 aaKnown RBP1.65□□□□□ -2.15
SSX2IP-205ENST00000460500 DNAH5Q8TE73 4624 aa1.65□□□□□ -2.15
SSX2IP-205ENST00000460500 LRP1BQ9NZR2 4599 aa1.65□□□□□ -2.15
SSX2IP-205ENST00000460500 PKHD1P08F94 4074 aa1.65□□□□□ -2.15
SSX2IP-205ENST00000460500 TNXBP22105 4242 aa1.65□□□□□ -2.15
SSX2IP-205ENST00000460500 STARD9Q9P2P6 4700 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms