RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 KRTAP10-8P60410 259 aa9.53□□□□□ -0.88
HPS3-202ENST00000460120 COX6B2Q6YFQ2 88 aa9.49□□□□□ -0.89
HPS3-202ENST00000460120 KIAA1109Q2LD37 5005 aa9.49□□□□□ -0.89
HPS3-202ENST00000460120 H0YAA0 97 aa9.47□□□□□ -0.89
HPS3-202ENST00000460120 RYR1P21817 5038 aa9.47□□□□□ -0.89
HPS3-202ENST00000460120 A0A1B0GU33 70 aa9.44□□□□□ -0.9
HPS3-202ENST00000460120 XP32Q5T750 250 aa9.43□□□□□ -0.9
HPS3-202ENST00000460120 RPL37P61927 97 aaKnown RBP9.4□□□□□ -0.9
HPS3-202ENST00000460120 H1FX-AS1Q4G0G2 97 aa9.38□□□□□ -0.91
HPS3-202ENST00000460120 ROMO1P60602 79 aa9.31□□□□□ -0.92
HPS3-202ENST00000460120 LPAP08519 4548 aa9.31□□□□□ -0.92
HPS3-202ENST00000460120 EPPK1P58107 5090 aaKnown RBP9.31□□□□□ -0.92
HPS3-202ENST00000460120 MT1HL1P0DM35 61 aa9.31□□□□□ -0.92
HPS3-202ENST00000460120 KRTAP3-3Q9BYR6 98 aa9.27□□□□□ -0.93
HPS3-202ENST00000460120 S4R3F8 94 aa9.23□□□□□ -0.93
HPS3-202ENST00000460120 LRP2P98164 4655 aa9.21□□□□□ -0.94
HPS3-202ENST00000460120 A0A0D9SG42 100 aa9.2□□□□□ -0.94
HPS3-202ENST00000460120 KRTAP25-1Q3LHN0 102 aa9.2□□□□□ -0.94
HPS3-202ENST00000460120 ABCA13Q86UQ4 5058 aa9.17□□□□□ -0.94
HPS3-202ENST00000460120 KRTAP10-6P60371 365 aaPredicted RBP9.16□□□□□ -0.94
HPS3-202ENST00000460120 P0C880 135 aa9.16□□□□□ -0.94
HPS3-202ENST00000460120 KRTAP13-4Q3LI77 160 aa9.14□□□□□ -0.95
HPS3-202ENST00000460120 CRIPTQ9P021 101 aa9.14□□□□□ -0.95
HPS3-202ENST00000460120 KRTAP4-5Q9BYR2 181 aa9.13□□□□□ -0.95
HPS3-202ENST00000460120 KRTAP3-2Q9BYR7 98 aa9.1□□□□□ -0.95
HPS3-202ENST00000460120 K7ERS5 55 aa9.07□□□□□ -0.96
HPS3-202ENST00000460120 TPRXLQ17RH7 258 aa8.99□□□□□ -0.97
HPS3-202ENST00000460120 SPINT4Q6UDR6 99 aa8.86□□□□□ -0.99
HPS3-202ENST00000460120 KRTAP12-2P59991 146 aa8.84□□□□□ -0.99
HPS3-202ENST00000460120 J3QL48 77 aa8.82□□□□□ -1
HPS3-202ENST00000460120 A0A0A0MQY5 61 aa8.81□□□□□ -1
HPS3-202ENST00000460120 NDUFAF8A1L188 74 aa8.8□□□□□ -1
HPS3-202ENST00000460120 C10orf95Q9H7T3 257 aa8.74□□□□□ -1.01
HPS3-202ENST00000460120 HERC2O95714 4834 aa8.74□□□□□ -1.01
HPS3-202ENST00000460120 KRTAP4-1Q9BYQ7 146 aa8.73□□□□□ -1.01
HPS3-202ENST00000460120 KRTAP12-1P59990 96 aa8.71□□□□□ -1.01
HPS3-202ENST00000460120 SEC61BP60468 96 aaKnown RBP8.7□□□□□ -1.02
HPS3-202ENST00000460120 MUC2Q02817 5179 aa8.68□□□□□ -1.02
HPS3-202ENST00000460120 M0QZ58 72 aa8.67□□□□□ -1.02
HPS3-202ENST00000460120 MUC17Q685J3 4493 aa8.66□□□□□ -1.02
HPS3-202ENST00000460120 R4GN34 69 aa8.61□□□□□ -1.03
HPS3-202ENST00000460120 KRTAP15-1Q3LI76 137 aa8.6□□□□□ -1.03
HPS3-202ENST00000460120 LORP23490 312 aaPredicted RBP8.6□□□□□ -1.03
HPS3-202ENST00000460120 HERC1Q15751 4861 aa8.44□□□□□ -1.06
HPS3-202ENST00000460120 KRTAP19-2Q3LHN2 52 aa8.4□□□□□ -1.06
HPS3-202ENST00000460120 BIRC6Q9NR09 4857 aa8.39□□□□□ -1.07
HPS3-202ENST00000460120 PCLOQ9Y6V0 5065 aa8.37□□□□□ -1.07
HPS3-202ENST00000460120 LUZP6Q538Z0 58 aa8.25□□□□□ -1.09
HPS3-202ENST00000460120 FAT4Q6V0I7 4981 aa8.22□□□□□ -1.09
HPS3-202ENST00000460120 HMCN2Q8NDA2 5059 aa8.21□□□□□ -1.1
HPS3-202ENST00000460120 CAMK2N1Q7Z7J9 78 aa8.21□□□□□ -1.1
HPS3-202ENST00000460120 FLGP20930 4061 aaPredicted RBP8.19□□□□□ -1.1
HPS3-202ENST00000460120 RNF213Q63HN8 5207 aa8.12□□□□□ -1.11
HPS3-202ENST00000460120 UBR4Q5T4S7 5183 aa8.04□□□□□ -1.12
HPS3-202ENST00000460120 M0R2T5 61 aa8.01□□□□□ -1.13
HPS3-202ENST00000460120 LCE2CQ5TA81 110 aa7.98□□□□□ -1.13
HPS3-202ENST00000460120 PLAC4Q8WY50 150 aa7.85□□□□□ -1.15
HPS3-202ENST00000460120 MT1HP80294 61 aa7.81□□□□□ -1.16
HPS3-202ENST00000460120 TNP1P09430 55 aa7.77□□□□□ -1.17
HPS3-202ENST00000460120 KRTAP19-1Q8IUB9 90 aa7.76□□□□□ -1.17
HPS3-202ENST00000460120 KRTAP10-10P60014 251 aa7.75□□□□□ -1.17
HPS3-202ENST00000460120 PP632Q6XCG6 107 aa7.73□□□□□ -1.17
HPS3-202ENST00000460120 MT1FP04733 61 aa7.7□□□□□ -1.18
HPS3-202ENST00000460120 SPRR2GQ9BYE4 73 aa7.7□□□□□ -1.18
HPS3-202ENST00000460120 MT2AP02795 61 aa7.67□□□□□ -1.18
HPS3-202ENST00000460120 KRTAP9-8Q9BYQ0 159 aa7.58□□□□□ -1.2
HPS3-202ENST00000460120 LCE3AQ5TA76 89 aa7.46□□□□□ -1.22
HPS3-202ENST00000460120 KRTAP23-1A1A580 65 aa7.38□□□□□ -1.23
HPS3-202ENST00000460120 MT1BP07438 61 aa7.37□□□□□ -1.23
HPS3-202ENST00000460120 KRTAP19-8Q3LI54 63 aa7.34□□□□□ -1.23
HPS3-202ENST00000460120 KRTAP10-5P60370 271 aa7.31□□□□□ -1.24
HPS3-202ENST00000460120 MT1XP80297 61 aa7.3□□□□□ -1.24
HPS3-202ENST00000460120 KRTAP9-3Q9BYQ3 159 aa7.25□□□□□ -1.25
HPS3-202ENST00000460120 USH2AO75445 5202 aa7.22□□□□□ -1.25
HPS3-202ENST00000460120 SPRR5A0A1B0GTR4 108 aa7.19□□□□□ -1.26
HPS3-202ENST00000460120 KRTAP10-7P60409 375 aaPredicted RBP7.18□□□□□ -1.26
HPS3-202ENST00000460120 KRTAP10-12P60413 245 aa7.15□□□□□ -1.26
HPS3-202ENST00000460120 PRO2289Q9P1D8 64 aa7.14□□□□□ -1.27
HPS3-202ENST00000460120 KRTAP8-1Q8IUC2 63 aa7.09□□□□□ -1.27
HPS3-202ENST00000460120 LCE2BO14633 110 aa7.06□□□□□ -1.28
HPS3-202ENST00000460120 KRTAP12-3P60328 96 aa7.05□□□□□ -1.28
HPS3-202ENST00000460120 KMT2DO14686 5537 aa7.05□□□□□ -1.28
HPS3-202ENST00000460120 LCE2AQ5TA79 106 aaPredicted RBP6.88□□□□□ -1.31
HPS3-202ENST00000460120 KRTAP19-5Q3LI72 72 aa6.85□□□□□ -1.31
HPS3-202ENST00000460120 KRTAP4-8A0A0G2JLE6 195 aa6.83□□□□□ -1.32
HPS3-202ENST00000460120 KRTAP4-8Q9BYQ9 185 aa6.83□□□□□ -1.32
HPS3-202ENST00000460120 INE1O15225 51 aa6.8□□□□□ -1.32
HPS3-202ENST00000460120 FSIP2Q5CZC0 6907 aa6.75□□□□□ -1.33
HPS3-202ENST00000460120 LCE3CQ5T5A8 94 aa6.6□□□□□ -1.35
HPS3-202ENST00000460120 SSPOA2VEC9 5147 aa6.54□□□□□ -1.36
HPS3-202ENST00000460120 KRTAP4-7Q9BYR0 210 aa6.53□□□□□ -1.36
HPS3-202ENST00000460120 KRTAP19-7Q3SYF9 63 aa6.49□□□□□ -1.37
HPS3-202ENST00000460120 KRTAP9-6A8MVA2 160 aa6.43□□□□□ -1.38
HPS3-202ENST00000460120 MT1EP04732 61 aa6.31□□□□□ -1.4
HPS3-202ENST00000460120 MT1LQ93083 61 aa6.3□□□□□ -1.4
HPS3-202ENST00000460120 FCGBPQ9Y6R7 5405 aaPredicted RBP6.25□□□□□ -1.41
HPS3-202ENST00000460120 KRTAP19-6Q3LI70 58 aa6.22□□□□□ -1.41
HPS3-202ENST00000460120 MUC12Q9UKN1 5478 aa6.22□□□□□ -1.41
HPS3-202ENST00000460120 KRTAP4-3Q9BYR4 195 aa6.15□□□□□ -1.42
HPS3-202ENST00000460120 LOC100996750A0A140TA64 210 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms