RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 SPRR2BP35325 72 aa5.24□□□□□ -1.57
GPNMB-204ENST00000459927 SPRR2AP35326 72 aa5.24□□□□□ -1.57
GPNMB-204ENST00000459927 SMIM6P0DI80 62 aa5.2□□□□□ -1.58
GPNMB-204ENST00000459927 KRTAP2-2Q9BYT5 123 aa5.2□□□□□ -1.58
GPNMB-204ENST00000459927 KRTAP2-1Q9BYU5 128 aa5.2□□□□□ -1.58
GPNMB-204ENST00000459927 SPCS1Q9Y6A9 102 aa5.19□□□□□ -1.58
GPNMB-204ENST00000459927 H0YAA0 97 aa5.18□□□□□ -1.58
GPNMB-204ENST00000459927 MT1XP80297 61 aa5.18□□□□□ -1.58
GPNMB-204ENST00000459927 PRO2289Q9P1D8 64 aa5.18□□□□□ -1.58
GPNMB-204ENST00000459927 LCE1AQ5T7P2 110 aa5.17□□□□□ -1.58
GPNMB-204ENST00000459927 NDUFC1O43677 76 aa5.16□□□□□ -1.58
GPNMB-204ENST00000459927 KRTAP8-1Q8IUC2 63 aa5.16□□□□□ -1.58
GPNMB-204ENST00000459927 PRO0461Q9UI25 63 aa5.16□□□□□ -1.58
GPNMB-204ENST00000459927 LOC101927531A0A1B0GV80 90 aa5.13□□□□□ -1.59
GPNMB-204ENST00000459927 ADM2Q7Z4H4 148 aa5.13□□□□□ -1.59
GPNMB-204ENST00000459927 A8MUN3 132 aa5.12□□□□□ -1.59
GPNMB-204ENST00000459927 PLAC4Q8WY50 150 aa5.12□□□□□ -1.59
GPNMB-204ENST00000459927 K7EP34 96 aa5.1□□□□□ -1.59
GPNMB-204ENST00000459927 KRTAP12-2P59991 146 aa5.1□□□□□ -1.59
GPNMB-204ENST00000459927 TRAV22A0A0B4J277 110 aa5.09□□□□□ -1.59
GPNMB-204ENST00000459927 KRTAP4-8A0A0G2JLE6 195 aa5.08□□□□□ -1.6
GPNMB-204ENST00000459927 KRTAP4-8Q9BYQ9 185 aa5.08□□□□□ -1.6
GPNMB-204ENST00000459927 SPRR2DP22532 72 aa5.07□□□□□ -1.6
GPNMB-204ENST00000459927 ACYP1P07311 99 aa5.06□□□□□ -1.6
GPNMB-204ENST00000459927 UQCRQO14949 82 aa5.02□□□□□ -1.61
GPNMB-204ENST00000459927 COL5A1-AS1Q5SY13 56 aa5.01□□□□□ -1.61
GPNMB-204ENST00000459927 H0Y9P7 68 aa5□□□□□ -1.61
GPNMB-204ENST00000459927 R4GN34 69 aa5□□□□□ -1.61
GPNMB-204ENST00000459927 F8W1H4 67 aa4.99□□□□□ -1.61
GPNMB-204ENST00000459927 ATOX1O00244 68 aa4.99□□□□□ -1.61
GPNMB-204ENST00000459927 ETDBQ3ZM63 59 aa4.99□□□□□ -1.61
GPNMB-204ENST00000459927 LOC105371267A0A1B0GV96 52 aa4.98□□□□□ -1.61
GPNMB-204ENST00000459927 P0C880 135 aa4.98□□□□□ -1.61
GPNMB-204ENST00000459927 LCE3BQ5TA77 95 aa4.97□□□□□ -1.61
GPNMB-204ENST00000459927 GTF2H5Q6ZYL4 71 aa4.95□□□□□ -1.62
GPNMB-204ENST00000459927 M0QZ58 72 aa4.94□□□□□ -1.62
GPNMB-204ENST00000459927 KRTAP10-7P60409 375 aaPredicted RBP4.94□□□□□ -1.62
GPNMB-204ENST00000459927 KRTAP10-12P60413 245 aa4.93□□□□□ -1.62
GPNMB-204ENST00000459927 HIST1H4AP62805 103 aaKnown RBP4.93□□□□□ -1.62
GPNMB-204ENST00000459927 C20orf197Q8N268 126 aa4.92□□□□□ -1.62
GPNMB-204ENST00000459927 LINC00208Q96KT6 92 aa4.92□□□□□ -1.62
GPNMB-204ENST00000459927 LINC01554Q52M75 96 aa4.89□□□□□ -1.63
GPNMB-204ENST00000459927 ATP5EP2Q5VTU8 51 aa4.87□□□□□ -1.63
GPNMB-204ENST00000459927 MP68P56378 58 aa4.83□□□□□ -1.64
GPNMB-204ENST00000459927 FAM240AA0A1B0GVK7 77 aa4.82□□□□□ -1.64
GPNMB-204ENST00000459927 OCR1Q9BZK8 76 aa4.81□□□□□ -1.64
GPNMB-204ENST00000459927 DMAC1Q96GE9 116 aa4.78□□□□□ -1.64
GPNMB-204ENST00000459927 GPR98Q8WXG9 6306 aa4.77□□□□□ -1.65
GPNMB-204ENST00000459927 LINC00643Q86TS7 51 aa4.77□□□□□ -1.65
GPNMB-204ENST00000459927 DSTQ03001 7570 aaKnown RBP4.75□□□□□ -1.65
GPNMB-204ENST00000459927 H3BPC8 53 aa4.73□□□□□ -1.65
GPNMB-204ENST00000459927 MT-ATP8P03928 68 aa4.73□□□□□ -1.65
GPNMB-204ENST00000459927 KRTAP4-9Q9BYQ8 210 aa4.72□□□□□ -1.65
GPNMB-204ENST00000459927 LOC100996750A0A140TA64 210 aa4.7□□□□□ -1.66
GPNMB-204ENST00000459927 KRTAP4-6Q9BYQ5 205 aa4.7□□□□□ -1.66
GPNMB-204ENST00000459927 TRAV7A0A075B6U4 112 aa4.69□□□□□ -1.66
GPNMB-204ENST00000459927 LCE5AQ5TCM9 118 aa4.68□□□□□ -1.66
GPNMB-204ENST00000459927 PCP4L1A6NKN8 68 aa4.66□□□□□ -1.66
GPNMB-204ENST00000459927 ACYP2P14621 99 aa4.66□□□□□ -1.66
GPNMB-204ENST00000459927 KRTAP19-7Q3SYF9 63 aa4.64□□□□□ -1.67
GPNMB-204ENST00000459927 KRTAP19-3Q7Z4W3 81 aa4.61□□□□□ -1.67
GPNMB-204ENST00000459927 SPTSSBQ8NFR3 76 aa4.61□□□□□ -1.67
GPNMB-204ENST00000459927 MT1EP04732 61 aa4.6□□□□□ -1.67
GPNMB-204ENST00000459927 SCGB1A1P11684 91 aa4.6□□□□□ -1.67
GPNMB-204ENST00000459927 CAMK2N1Q7Z7J9 78 aa4.55□□□□□ -1.68
GPNMB-204ENST00000459927 KRTAP13-4Q3LI77 160 aa4.54□□□□□ -1.68
GPNMB-204ENST00000459927 LCE1DQ5T752 114 aa4.54□□□□□ -1.68
GPNMB-204ENST00000459927 CYSTM1Q9H1C7 97 aa4.52□□□□□ -1.69
GPNMB-204ENST00000459927 CHKB-CPT1BH3BT56 60 aa4.51□□□□□ -1.69
GPNMB-204ENST00000459927 MT1GP13640 62 aa4.51□□□□□ -1.69
GPNMB-204ENST00000459927 LCE4AQ5TA78 99 aa4.48□□□□□ -1.69
GPNMB-204ENST00000459927 MT4P47944 62 aa4.46□□□□□ -1.7
GPNMB-204ENST00000459927 A0A0D9SG42 100 aa4.45□□□□□ -1.7
GPNMB-204ENST00000459927 KRTAP19-5Q3LI72 72 aa4.45□□□□□ -1.7
GPNMB-204ENST00000459927 HMCN1Q96RW7 5635 aa4.44□□□□□ -1.7
GPNMB-204ENST00000459927 PP632Q6XCG6 107 aa4.43□□□□□ -1.7
GPNMB-204ENST00000459927 J3QR89 54 aa4.41□□□□□ -1.7
GPNMB-204ENST00000459927 A0A1B0GV90 55 aa4.39□□□□□ -1.71
GPNMB-204ENST00000459927 MT1MQ8N339 61 aa4.39□□□□□ -1.71
GPNMB-204ENST00000459927 SMIM20Q8N5G0 67 aa4.39□□□□□ -1.71
GPNMB-204ENST00000459927 AHNAK2Q8IVF2 5795 aa4.36□□□□□ -1.71
GPNMB-204ENST00000459927 KRTAP5-10Q6L8G5 202 aa4.36□□□□□ -1.71
GPNMB-204ENST00000459927 KRTAP5-4Q6L8H1 288 aa4.36□□□□□ -1.71
GPNMB-204ENST00000459927 MT1LQ93083 61 aa4.35□□□□□ -1.71
GPNMB-204ENST00000459927 SNURFQ9Y675 71 aa4.35□□□□□ -1.71
GPNMB-204ENST00000459927 SPANXA2-OT1Q8N9U9 137 aa4.34□□□□□ -1.71
GPNMB-204ENST00000459927 KRTAP4-3Q9BYR4 195 aa4.33□□□□□ -1.72
GPNMB-204ENST00000459927 SPINT4Q6UDR6 99 aa4.32□□□□□ -1.72
GPNMB-204ENST00000459927 SPATA8Q6RVD6 105 aa4.31□□□□□ -1.72
GPNMB-204ENST00000459927 SERP1Q9Y6X1 66 aa4.28□□□□□ -1.72
GPNMB-204ENST00000459927 KRTAP12-1P59990 96 aa4.27□□□□□ -1.73
GPNMB-204ENST00000459927 SEC61GP60059 68 aa4.27□□□□□ -1.73
GPNMB-204ENST00000459927 A0A1B0GU33 70 aa4.25□□□□□ -1.73
GPNMB-204ENST00000459927 KRTAP5-7Q6L8G8 165 aa4.23□□□□□ -1.73
GPNMB-204ENST00000459927 COA5Q86WW8 74 aa4.22□□□□□ -1.73
GPNMB-204ENST00000459927 C10orf95Q9H7T3 257 aa4.22□□□□□ -1.73
GPNMB-204ENST00000459927 KRTAP5-3Q6L8H2 238 aa4.21□□□□□ -1.74
GPNMB-204ENST00000459927 LCE3AQ5TA76 89 aa4.2□□□□□ -1.74
GPNMB-204ENST00000459927 KRTAP4-12Q9BQ66 201 aa4.17□□□□□ -1.74
GPNMB-204ENST00000459927 SERP2Q8N6R1 65 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms