RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 BDP1A6H8Y1 2624 aa0.87□□□□□ -2.27
CKAP2-204ENST00000459902 LAMA5O15230 3695 aa0.87□□□□□ -2.27
CKAP2-204ENST00000459902 CUBNO60494 3623 aa0.87□□□□□ -2.27
CKAP2-204ENST00000459902 PKD1P98161 4303 aa0.87□□□□□ -2.27
CKAP2-204ENST00000459902 SETXQ7Z333 2677 aaKnown RBP0.86□□□□□ -2.27
CKAP2-204ENST00000459902 CSMD1Q96PZ7 3565 aa0.86□□□□□ -2.27
CKAP2-204ENST00000459902 CHD8Q9HCK8 2581 aa0.86□□□□□ -2.27
CKAP2-204ENST00000459902 PTPN13Q12923 2485 aa0.86□□□□□ -2.27
CKAP2-204ENST00000459902 HUWE1Q7Z6Z7 4374 aaKnown RBP0.85□□□□□ -2.27
CKAP2-204ENST00000459902 ZANQ9Y493 2812 aa0.85□□□□□ -2.27
CKAP2-204ENST00000459902 DCHS1Q96JQ0 3298 aa0.85□□□□□ -2.27
CKAP2-204ENST00000459902 CEP250Q9BV73 2442 aa0.85□□□□□ -2.27
CKAP2-204ENST00000459902 RPS29P62273 56 aaKnown RBP0.85□□□□□ -2.27
CKAP2-204ENST00000459902 CACNA1AO00555 2505 aa0.85□□□□□ -2.27
CKAP2-204ENST00000459902 HIVEP3Q5T1R4 2406 aa0.85□□□□□ -2.27
CKAP2-204ENST00000459902 DNAH1Q9P2D7 4330 aa0.85□□□□□ -2.27
CKAP2-204ENST00000459902 ITPR1Q14643 2758 aa0.85□□□□□ -2.27
CKAP2-204ENST00000459902 HTTP42858 3142 aa0.84□□□□□ -2.27
CKAP2-204ENST00000459902 FAT3Q8TDW7 4589 aa0.84□□□□□ -2.27
CKAP2-204ENST00000459902 MAP1AP78559 2803 aaPredicted RBP0.84□□□□□ -2.27
CKAP2-204ENST00000459902 STAB1Q9NY15 2570 aa0.84□□□□□ -2.27
CKAP2-204ENST00000459902 KALRNO60229 2985 aa0.83□□□□□ -2.28
CKAP2-204ENST00000459902 NBEAL2Q6ZNJ1 2754 aa0.83□□□□□ -2.28
CKAP2-204ENST00000459902 NIPBLQ6KC79 2804 aaeCLIP0.83□□□□□ -2.28
CKAP2-204ENST00000459902 LRP1Q07954 4544 aaKnown RBP0.83□□□□□ -2.28
CKAP2-204ENST00000459902 CFAP47Q6ZTR5 3102 aa0.82□□□□□ -2.28
CKAP2-204ENST00000459902 LRRK2Q5S007 2527 aa0.82□□□□□ -2.28
CKAP2-204ENST00000459902 ANKRD11Q6UB99 2663 aaPredicted RBP0.82□□□□□ -2.28
CKAP2-204ENST00000459902 RIF1Q5UIP0 2472 aaKnown RBP0.82□□□□□ -2.28
CKAP2-204ENST00000459902 EPG5Q9HCE0 2579 aa0.82□□□□□ -2.28
CKAP2-204ENST00000459902 NSD1Q96L73 2696 aaPredicted RBP0.82□□□□□ -2.28
CKAP2-204ENST00000459902 PKHD1P08F94 4074 aa0.81□□□□□ -2.28
CKAP2-204ENST00000459902 MTORP42345 2549 aa0.81□□□□□ -2.28
CKAP2-204ENST00000459902 WDFY4Q6ZS81 3184 aa0.81□□□□□ -2.28
CKAP2-204ENST00000459902 FAM186AA6NE01 2351 aa0.81□□□□□ -2.28
CKAP2-204ENST00000459902 ACANP16112 2415 aa0.81□□□□□ -2.28
CKAP2-204ENST00000459902 XIRP2A4UGR9 3374 aa0.81□□□□□ -2.28
CKAP2-204ENST00000459902 CSMD2Q7Z408 3487 aa0.8□□□□□ -2.28
CKAP2-204ENST00000459902 MXRA5Q9NR99 2828 aa0.8□□□□□ -2.28
CKAP2-204ENST00000459902 FREM2Q5SZK8 3169 aa0.8□□□□□ -2.28
CKAP2-204ENST00000459902 HIVEP1P15822 2718 aa0.8□□□□□ -2.28
CKAP2-204ENST00000459902 SMR3BP02814 79 aaPredicted RBP0.8□□□□□ -2.28
CKAP2-204ENST00000459902 HRNRQ86YZ3 2850 aaPredicted RBP0.8□□□□□ -2.28
CKAP2-204ENST00000459902 CMYA5Q8N3K9 4069 aa0.8□□□□□ -2.28
CKAP2-204ENST00000459902 APOBP04114 4563 aaKnown RBP0.8□□□□□ -2.28
CKAP2-204ENST00000459902 SVEP1Q4LDE5 3571 aa0.8□□□□□ -2.28
CKAP2-204ENST00000459902 TRRAPQ9Y4A5 3859 aa0.79□□□□□ -2.28
CKAP2-204ENST00000459902 MUC3AQ02505 3323 aa0.79□□□□□ -2.28
CKAP2-204ENST00000459902 PLECQ15149 4684 aaKnown RBP0.79□□□□□ -2.28
CKAP2-204ENST00000459902 LAMA3Q16787 3333 aa0.79□□□□□ -2.28
CKAP2-204ENST00000459902 SONP18583 2426 aaKnown RBP0.78□□□□□ -2.28
CKAP2-204ENST00000459902 DNAH5Q8TE73 4624 aa0.78□□□□□ -2.28
CKAP2-204ENST00000459902 HTN3P15516 51 aa0.78□□□□□ -2.28
CKAP2-204ENST00000459902 CD52P31358 61 aa0.78□□□□□ -2.28
CKAP2-204ENST00000459902 ACACBO00763 2458 aa0.78□□□□□ -2.28
CKAP2-204ENST00000459902 UTP20O75691 2785 aaKnown RBP0.78□□□□□ -2.29
CKAP2-204ENST00000459902 NCOR2Q9Y618 2525 aa0.77□□□□□ -2.29
CKAP2-204ENST00000459902 TEP1Q99973 2627 aaKnown RBP0.77□□□□□ -2.29
CKAP2-204ENST00000459902 DNAH9Q9NYC9 4486 aa0.77□□□□□ -2.29
CKAP2-204ENST00000459902 VPS13AQ96RL7 3174 aa0.77□□□□□ -2.29
CKAP2-204ENST00000459902 SPEGQ15772 3267 aa0.76□□□□□ -2.29
CKAP2-204ENST00000459902 SPG11Q96JI7 2443 aa0.76□□□□□ -2.29
CKAP2-204ENST00000459902 MT1AP04731 61 aa0.76□□□□□ -2.29
CKAP2-204ENST00000459902 SRCAPQ6ZRS2 3230 aa0.76□□□□□ -2.29
CKAP2-204ENST00000459902 ADGRG4Q8IZF6 3080 aa0.76□□□□□ -2.29
CKAP2-204ENST00000459902 FAT1Q14517 4588 aa0.76□□□□□ -2.29
CKAP2-204ENST00000459902 DNAH17Q9UFH2 4485 aa0.76□□□□□ -2.29
CKAP2-204ENST00000459902 LOC400499M0QZD8 3231 aa0.75□□□□□ -2.29
CKAP2-204ENST00000459902 KRTAP19-5Q3LI72 72 aa0.75□□□□□ -2.29
CKAP2-204ENST00000459902 TGP01266 2768 aa0.75□□□□□ -2.29
CKAP2-204ENST00000459902 CFAP46Q8IYW2 2715 aa0.75□□□□□ -2.29
CKAP2-204ENST00000459902 USP9XQ93008 2570 aaPredicted RBP0.75□□□□□ -2.29
CKAP2-204ENST00000459902 UNC79Q9P2D8 2635 aa0.74□□□□□ -2.29
CKAP2-204ENST00000459902 SPRR2DP22532 72 aa0.74□□□□□ -2.29
CKAP2-204ENST00000459902 LAMA1P25391 3075 aa0.74□□□□□ -2.29
CKAP2-204ENST00000459902 UTRNP46939 3433 aa0.73□□□□□ -2.29
CKAP2-204ENST00000459902 VPS13CQ709C8 3753 aa0.73□□□□□ -2.29
CKAP2-204ENST00000459902 LPAP08519 4548 aa0.73□□□□□ -2.29
CKAP2-204ENST00000459902 SYNE1Q8NF91 8797 aaKnown RBP0.73□□□□□ -2.29
CKAP2-204ENST00000459902 USP34Q70CQ2 3546 aa0.73□□□□□ -2.29
CKAP2-204ENST00000459902 SPRR2BP35325 72 aa0.73□□□□□ -2.29
CKAP2-204ENST00000459902 FLNBO75369 2602 aaKnown RBP0.73□□□□□ -2.29
CKAP2-204ENST00000459902 ANKHD1Q8IWZ3 2542 aaKnown RBP0.73□□□□□ -2.29
CKAP2-204ENST00000459902 TEX15Q9BXT5 2789 aa0.73□□□□□ -2.29
CKAP2-204ENST00000459902 ITPR2Q14571 2701 aa0.73□□□□□ -2.29
CKAP2-204ENST00000459902 GOLGB1Q14789 3259 aaKnown RBP0.72□□□□□ -2.29
CKAP2-204ENST00000459902 ASPMQ8IZT6 3477 aa0.72□□□□□ -2.29
CKAP2-204ENST00000459902 KRTAP21-1Q3LI58 79 aa0.71□□□□□ -2.3
CKAP2-204ENST00000459902 TLN2Q9Y4G6 2542 aa0.7□□□□□ -2.3
CKAP2-204ENST00000459902 DEFB4AO15263 64 aa0.7□□□□□ -2.3
CKAP2-204ENST00000459902 KRTAP6-2Q3LI66 62 aa0.7□□□□□ -2.3
CKAP2-204ENST00000459902 FLNAP21333 2647 aaKnown RBP0.69□□□□□ -2.3
CKAP2-204ENST00000459902 DYNC1H1Q14204 4646 aaKnown RBP0.69□□□□□ -2.3
CKAP2-204ENST00000459902 SPRR2AP35326 72 aa0.69□□□□□ -2.3
CKAP2-204ENST00000459902 CENPEQ02224 2701 aa0.69□□□□□ -2.3
CKAP2-204ENST00000459902 LAMA2P24043 3122 aaKnown RBP0.68□□□□□ -2.3
CKAP2-204ENST00000459902 MYO18BQ8IUG5 2567 aa0.67□□□□□ -2.3
CKAP2-204ENST00000459902 ZFYVE26Q68DK2 2539 aa0.67□□□□□ -2.3
CKAP2-204ENST00000459902 EP400Q96L91 3159 aa0.66□□□□□ -2.3
CKAP2-204ENST00000459902 MYO15AQ9UKN7 3530 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms