RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 FAM240AA0A1B0GVK7 77 aa4.57□□□□□ -1.68
HDLBP-228ENST00000459788 ATP5EP2Q5VTU8 51 aa4.57□□□□□ -1.68
HDLBP-228ENST00000459788 CYP4F30PQ9H0H9 118 aa4.57□□□□□ -1.68
HDLBP-228ENST00000459788 FAM236AA0A1B0GUQ0 79 aa4.56□□□□□ -1.68
HDLBP-228ENST00000459788 FAM236BA0A1B0GV22 79 aa4.56□□□□□ -1.68
HDLBP-228ENST00000459788 LOC101927531A0A1B0GV80 90 aa4.56□□□□□ -1.68
HDLBP-228ENST00000459788 LCA10Q71F78 164 aa4.56□□□□□ -1.68
HDLBP-228ENST00000459788 SPRR2GQ9BYE4 73 aa4.56□□□□□ -1.68
HDLBP-228ENST00000459788 TRAV22A0A0B4J277 110 aa4.55□□□□□ -1.68
HDLBP-228ENST00000459788 SYNE2Q8WXH0 6885 aaKnown RBP4.54□□□□□ -1.68
HDLBP-228ENST00000459788 KRTAP19-8Q3LI54 63 aa4.53□□□□□ -1.68
HDLBP-228ENST00000459788 KRTAP6-3Q3LI67 103 aa4.53□□□□□ -1.68
HDLBP-228ENST00000459788 LCE4AQ5TA78 99 aa4.53□□□□□ -1.68
HDLBP-228ENST00000459788 CRIPTQ9P021 101 aa4.53□□□□□ -1.68
HDLBP-228ENST00000459788 ATOX1O00244 68 aa4.52□□□□□ -1.69
HDLBP-228ENST00000459788 Q5VV11 94 aa4.52□□□□□ -1.69
HDLBP-228ENST00000459788 UQCRQO14949 82 aa4.51□□□□□ -1.69
HDLBP-228ENST00000459788 KLKP1Q107X0 134 aa4.51□□□□□ -1.69
HDLBP-228ENST00000459788 MT1BP07438 61 aa4.48□□□□□ -1.69
HDLBP-228ENST00000459788 IMUPQ9GZP8 106 aa4.48□□□□□ -1.69
HDLBP-228ENST00000459788 A6NN06 94 aa4.47□□□□□ -1.69
HDLBP-228ENST00000459788 A8MUN3 132 aa4.47□□□□□ -1.69
HDLBP-228ENST00000459788 H0YAA0 97 aa4.47□□□□□ -1.69
HDLBP-228ENST00000459788 HIST1H4AP62805 103 aaKnown RBP4.46□□□□□ -1.7
HDLBP-228ENST00000459788 LCE5AQ5TCM9 118 aa4.46□□□□□ -1.7
HDLBP-228ENST00000459788 H0Y9P7 68 aa4.45□□□□□ -1.7
HDLBP-228ENST00000459788 LINC00643Q86TS7 51 aa4.45□□□□□ -1.7
HDLBP-228ENST00000459788 NDUFC1O43677 76 aa4.44□□□□□ -1.7
HDLBP-228ENST00000459788 KRTAP10-5P60370 271 aa4.43□□□□□ -1.7
HDLBP-228ENST00000459788 A0A087WVE0 104 aa4.39□□□□□ -1.71
HDLBP-228ENST00000459788 MP68P56378 58 aa4.38□□□□□ -1.71
HDLBP-228ENST00000459788 H3BPC8 53 aa4.37□□□□□ -1.71
HDLBP-228ENST00000459788 LINC00208Q96KT6 92 aa4.37□□□□□ -1.71
HDLBP-228ENST00000459788 OCR1Q9BZK8 76 aa4.37□□□□□ -1.71
HDLBP-228ENST00000459788 J3QR89 54 aa4.33□□□□□ -1.72
HDLBP-228ENST00000459788 KRTAP5-9P26371 169 aa4.32□□□□□ -1.72
HDLBP-228ENST00000459788 NEBP20929 6669 aa4.32□□□□□ -1.72
HDLBP-228ENST00000459788 ADM2Q7Z4H4 148 aa4.31□□□□□ -1.72
HDLBP-228ENST00000459788 C20orf197Q8N268 126 aa4.31□□□□□ -1.72
HDLBP-228ENST00000459788 SVIPQ8NHG7 77 aa4.31□□□□□ -1.72
HDLBP-228ENST00000459788 PRO2289Q9P1D8 64 aa4.29□□□□□ -1.72
HDLBP-228ENST00000459788 DMAC1Q96GE9 116 aa4.28□□□□□ -1.72
HDLBP-228ENST00000459788 MUC12Q9UKN1 5478 aa4.28□□□□□ -1.72
HDLBP-228ENST00000459788 K7ERU9 68 aa4.27□□□□□ -1.73
HDLBP-228ENST00000459788 SCGB1A1P11684 91 aa4.25□□□□□ -1.73
HDLBP-228ENST00000459788 PLAC4Q8WY50 150 aa4.25□□□□□ -1.73
HDLBP-228ENST00000459788 R4GN34 69 aa4.24□□□□□ -1.73
HDLBP-228ENST00000459788 TRAV7A0A075B6U4 112 aa4.22□□□□□ -1.73
HDLBP-228ENST00000459788 SMIM20Q8N5G0 67 aa4.21□□□□□ -1.74
HDLBP-228ENST00000459788 KMT2DO14686 5537 aa4.21□□□□□ -1.74
HDLBP-228ENST00000459788 MT1XP80297 61 aa4.2□□□□□ -1.74
HDLBP-228ENST00000459788 P0C880 135 aa4.19□□□□□ -1.74
HDLBP-228ENST00000459788 KRTAP12-2P59991 146 aa4.19□□□□□ -1.74
HDLBP-228ENST00000459788 MT-ATP8P03928 68 aa4.18□□□□□ -1.74
HDLBP-228ENST00000459788 ACYP2P14621 99 aa4.18□□□□□ -1.74
HDLBP-228ENST00000459788 SPTSSBQ8NFR3 76 aa4.18□□□□□ -1.74
HDLBP-228ENST00000459788 M0QZ58 72 aa4.17□□□□□ -1.74
HDLBP-228ENST00000459788 KRTAP20-1Q3LI63 56 aa4.17□□□□□ -1.74
HDLBP-228ENST00000459788 MDN1Q9NU22 5596 aa4.17□□□□□ -1.74
HDLBP-228ENST00000459788 SPRR2FQ96RM1 72 aa4.11□□□□□ -1.75
HDLBP-228ENST00000459788 KRTAP8-1Q8IUC2 63 aa4.1□□□□□ -1.75
HDLBP-228ENST00000459788 KRTAP2-3P0C7H8 128 aa4.09□□□□□ -1.75
HDLBP-228ENST00000459788 KRTAP2-4Q9BYR9 128 aa4.09□□□□□ -1.75
HDLBP-228ENST00000459788 LINC01554Q52M75 96 aa4.07□□□□□ -1.76
HDLBP-228ENST00000459788 SPANXA2-OT1Q8N9U9 137 aa4.07□□□□□ -1.76
HDLBP-228ENST00000459788 CHKB-CPT1BH3BT56 60 aa4.06□□□□□ -1.76
HDLBP-228ENST00000459788 SPRR2EP22531 72 aa4.05□□□□□ -1.76
HDLBP-228ENST00000459788 SPRR2BP35325 72 aa4.05□□□□□ -1.76
HDLBP-228ENST00000459788 SPRR2AP35326 72 aa4.05□□□□□ -1.76
HDLBP-228ENST00000459788 KRTAP10-12P60413 245 aa4.03□□□□□ -1.76
HDLBP-228ENST00000459788 LCE1AQ5T7P2 110 aa4.02□□□□□ -1.77
HDLBP-228ENST00000459788 SERP2Q8N6R1 65 aa3.99□□□□□ -1.77
HDLBP-228ENST00000459788 SNURFQ9Y675 71 aa3.99□□□□□ -1.77
HDLBP-228ENST00000459788 KRTAP19-4Q3LI73 84 aa3.98□□□□□ -1.77
HDLBP-228ENST00000459788 KRTAP10-7P60409 375 aaPredicted RBP3.97□□□□□ -1.77
HDLBP-228ENST00000459788 PCP4P48539 62 aa3.96□□□□□ -1.78
HDLBP-228ENST00000459788 KRTAP2-2Q9BYT5 123 aa3.96□□□□□ -1.78
HDLBP-228ENST00000459788 KRTAP2-1Q9BYU5 128 aa3.96□□□□□ -1.78
HDLBP-228ENST00000459788 SPRR2DP22532 72 aa3.93□□□□□ -1.78
HDLBP-228ENST00000459788 ANAPC13Q9BS18 74 aa3.91□□□□□ -1.78
HDLBP-228ENST00000459788 COX7CP15954 63 aa3.89□□□□□ -1.79
HDLBP-228ENST00000459788 CYSTM1Q9H1C7 97 aa3.89□□□□□ -1.79
HDLBP-228ENST00000459788 CCDC179H3BU77 68 aa3.88□□□□□ -1.79
HDLBP-228ENST00000459788 SEC61GP60059 68 aa3.88□□□□□ -1.79
HDLBP-228ENST00000459788 KRTAP13-4Q3LI77 160 aa3.88□□□□□ -1.79
HDLBP-228ENST00000459788 CAMK2N1Q7Z7J9 78 aa3.88□□□□□ -1.79
HDLBP-228ENST00000459788 COA5Q86WW8 74 aa3.88□□□□□ -1.79
HDLBP-228ENST00000459788 SERP1Q9Y6X1 66 aa3.87□□□□□ -1.79
HDLBP-228ENST00000459788 A0A1B0GU33 70 aa3.79□□□□□ -1.8
HDLBP-228ENST00000459788 H7BZZ5 65 aa3.79□□□□□ -1.8
HDLBP-228ENST00000459788 A0A0D9SG42 100 aa3.75□□□□□ -1.81
HDLBP-228ENST00000459788 KRTAP19-7Q3SYF9 63 aa3.75□□□□□ -1.81
HDLBP-228ENST00000459788 SPATA8Q6RVD6 105 aa3.74□□□□□ -1.81
HDLBP-228ENST00000459788 SMIM26A0A096LP01 95 aa3.73□□□□□ -1.81
HDLBP-228ENST00000459788 MT1EP04732 61 aa3.73□□□□□ -1.81
HDLBP-228ENST00000459788 KRTAP12-1P59990 96 aa3.72□□□□□ -1.81
HDLBP-228ENST00000459788 SPINT4Q6UDR6 99 aa3.72□□□□□ -1.81
HDLBP-228ENST00000459788 KRTAP19-3Q7Z4W3 81 aa3.72□□□□□ -1.81
HDLBP-228ENST00000459788 A0A1B0GU69 56 aa3.7□□□□□ -1.82
HDLBP-228ENST00000459788 TMEM258P61165 79 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms